Difference between revisions of "Os10g0388600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0388600| Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein| Version = NM_001071031.2 GI:297610417 GeneID:4348515| Length = 8642...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os10g0388600|
 
−
Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein|
 
−
Version = NM_001071031.2 GI:297610417 GeneID:4348515|
 
−
Length = 8642 bp|
 
−
Definition = Oryza sativa Japonica Group Os10g0388600, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
+
Please input expression information here.
−
AP = Chromosome 10:13201049..13209690|
+
 
−
CDS = 13201049..13201080,13201165..13201306,13201523..13201715,13201885..13201981,13202065..13202189<br>,13202277..13202395,13203886..13203959,13204020..13204074,13204111..13204161<br>,13204272..13204518,13204601..13204697,13204831..13204905,13206947..13207149<br>,13207418..13207566,13207656..13207829,13207937..13208062,13208154..13208284<br>,13208404..13208479,13208559..13208688,13208776..13208854,13208928..13209126<br>,13209252..13209359,13209430..13209690|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008403:13201049..13209690
+
 
−
source=RiceChromosome10
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008403:13201049..13209690
+
 
−
source=RiceChromosome10
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggagaatgccgtagtcgtgcaaccatggagaattgttcggttccacgatatacaaatggatcacatacactggaaatggtggattgtccgtgcgagggtcatcaagaaaggacatctgcaagagaattattacggcgatctacaaattcgactaatactaattgatgaattgggcactaagatggaggcaattgtttaccgtcgtcaagctgagcatttcaaccagcttttaagatgtggatctgtttatgatttctataacgtcgggtttgatccgacagaaatgatcgtgcatctaagatttaagataagatctcagttctgcatgattctcaataatgtaacaactacccgcacgcctcatgatgtcattggattagttgtgcatgtcggggacattgagttcaggagtttgtatttgcgtcagacgccgacaaggataatcgcgctggttaatcctaggttgcagataattttcgttcgtgtatgggaccaacaacttacccgcaacttgactaggtggcgctcagcacggacacatttcgattgttttgtggctacgctgacgagggtggacagaagagcagatgaactatcaactacttatgagtctgacataatttttaatcctgattcagcatcagcaaatgaattcaatgttttgcgccaggcattagcagtatcaccttctaatgttcaagagcaggaaaggatatttcacatgtttgttattcttcttttatttgtcattttgtgcaaaaatttttatatcaaattttcgtcagtagagttcgatgagattaagatggaacacgtcttccgaacatgctggaagcaaaacaaatttggtgctcaatatattcggtttatcctaaaggacacaacggatacaaggatggaagcactagcgtatgaccagcaagcagatcgttttaatggaaccatacagagtggcttagtctataattttactaatgtggggttccaaccgaccgatgtgcctacctatgccaacctaaccatgcaagctaagttttgtatgattctgacaccaaagacagccctacgcaagcctcgttttgtagacttcagtgctatttttaccgacgcgataagtgatgatatgttcatagatgttgttggtgtgcttatatacgtgggagaaatacatcatcaccaactttatggacaaagcttacctactagggatattgccttggttaatcgtcgtgtggtggcaagcacttgcatcatagtattactgcatgtctgctacatgtctcaagaaattagatattctaaccgatatccttgcttaatctcatgtggtactcaggtcaatcaagacgccattcatgctgatatgattacaaccccaccctcgaagaaagcaaaaaattcggaatccgaggagcatggagtatccaaagtcagcatgccaaatattgatgtaccatcaaatttgatacgatctatgtttggccagacctacaagtatctccctcaagattatgaattaacaaatgaggatgtaatggccatatttttaattgaagattcggctgaaaattgtacactggtggacatgggtcatttttataacaagaaacgtcacttaacgtgccttctctctggagataaatttttgaacgatgatgtcatcagtgcgtacatacactgtttgagtgagcaagcaaataacgataagaaagtgaaatatgaaaacccgtttctttctgacatgctgaaagcggctggggtcaatggagtaaatgaagatgaagataactttattacaaagatagtgaagaattacctacaccatgaactgatttttattccaataaatatgaaagataatcattggtatttagcggttgtcaacatagaaaaaaaacagatacaagtacttgattccatgtgtatgacattcaatcgtgctgacctcgcaaatacgctacaaagactacaatatcatcttaatattattggacggcaacaggacttgcctagccacaaatggggtgacctcaatgttatcaagtggccaataatagaacaactaaaagaaagaattcaggaagacagttcttcatgtggactattcatgctcaaacttatggagaattggacaggagaatcactttctcgttctattacacaggaggatattacactttttaggtccaaactagccagtgtattattacgttggaaaacaaataaggcggtcatgacgaccggggaacaaatcgaagataccaaagatagtgatgacgatgttgttatattagtatctaagatgagtaaacaagagttgataagcggccttctgcactacatccaacagattaattgtgctgaagccatggagaaaatatgggtacaaagttcaaggccgcactatattagcttgagtctcaaacagcttcaaacaatactaaagaaggatgagccattggaaagtgattgcttcaacatggctattcgtaagttcatgtatgaaaaaatcgagatgattcataaaactaaacaagcaatatcgaatcattgcttggacttgcaattttggagtgctactggctttggtaaagtcccggtccaccatgacaacataaatcttgcagagaccgtcggtagttggtcggaaattcattacaaactttcacagtgcaaagcgattcttataccagtacgccatgctcgaagttttatcgtgcttgtagtggaccaagaaagtcaaacgctctatgtgttagacccaaatccacttatgccagaatataaaaataacccaaatatgagatacaccagaaaactgataactatttgtgatcacttcaacaaagctatgagaaaggcatgccctggctctaggtggaatgaagacatcaacttgtggaggcaagtaattgtcaataatccggtttacagcaggtaa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MENAVVVQPWRIVRFHDIQMDHIHWKWWIVRARVIKKGHLQENY                    YGDLQIRLILIDELGTKMEAIVYRRQAEHFNQLLRCGSVYDFYNVGFDPTEMIVHLRF                    KIRSQFCMILNNVTTTRTPHDVIGLVVHVGDIEFRSLYLRQTPTRIIALVNPRLQIIF                    VRVWDQQLTRNLTRWRSARTHFDCFVATLTRVDRRADELSTTYESDIIFNPDSASANE                    FNVLRQALAVSPSNVQEQERIFHMFVILLLFVILCKNFYIKFSSVEFDEIKMEHVFRT                    CWKQNKFGAQYIRFILKDTTDTRMEALAYDQQADRFNGTIQSGLVYNFTNVGFQPTDV                    PTYANLTMQAKFCMILTPKTALRKPRFVDFSAIFTDAISDDMFIDVVGVLIYVGEIHH                    HQLYGQSLPTRDIALVNRRVVASTCIIVLLHVCYMSQEIRYSNRYPCLISCGTQVNQD                    AIHADMITTPPSKKAKNSESEEHGVSKVSMPNIDVPSNLIRSMFGQTYKYLPQDYELT                    NEDVMAIFLIEDSAENCTLVDMGHFYNKKRHLTCLLSGDKFLNDDVISAYIHCLSEQA                    NNDKKVKYENPFLSDMLKAAGVNGVNEDEDNFITKIVKNYLHHELIFIPINMKDNHWY                    LAVVNIEKKQIQVLDSMCMTFNRADLANTLQRLQYHLNIIGRQQDLPSHKWGDLNVIK                    WPIIEQLKERIQEDSSSCGLFMLKLMENWTGESLSRSITQEDITLFRSKLASVLLRWK                    TNKAVMTTGEQIEDTKDSDDDVVILVSKMSKQELISGLLHYIQQINCAEAMEKIWVQS                    SRPHYISLSLKQLQTILKKDEPLESDCFNMAIRKFMYEKIEMIHKTKQAISNHCLDLQ                    FWSATGFGKVPVHHDNINLAETVGSWSEIHYKLSQCKAILIPVRHARSFIVLVVDQES                    QTLYVLDPNPLMPEYKNNPNMRYTRKLITICDHFNKAMRKACPGSRWNEDINLWRQVI                    VNNPVYSR</aaseq>|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
−
DNA = <dnaseqindica>1..32#117..258#475..667#837..933#1017..1141#1229..1347#2838..2911#2972..3026#3063..3113#3224..3470#3553..3649#3783..3857#5899..6101#6370..6518#6608..6781#6889..7014#7106..7236#7356..7431#7511..7640#7728..7806#7880..8078#8204..8311#8382..8642#atggagaatgccgtagtcgtgcaaccatggaggtcactctttcttcattctattatttcttctgttgatggattgtgcaatgctatcatatcgtgtatattatcttccccatgcagaattgttcggttccacgatatacaaatggatcacatacactggaaatggtggattgtccgtgcgagggtcatcaagaaaggacatctgcaagagaattattacggcgatctacaaattcgactaatactaattgatgaattggtaagtcaaaatgatttttcaatcttctttttcagaattttagatctaatatgtagtttatttccactgtgactcactgtatgtagcaagcctctcagtgcacctcagccaatcaaatcacgccgaagctaaaatctttatatttattgattgattgattttaacgacaataatttttttagtgtcttatagtcttacatctcataacatgtgtagggcactaagatggaggcaattgtttaccgtcgtcaagctgagcatttcaaccagcttttaagatgtggatctgtttatgatttctataacgtcgggtttgatccgacagaaatgatcgtgcatctaagatttaagataagatctcagttctgcatgattctcaataatgtaacaactacccgcacgcctcatggtcctgtccacatgctacgttgtccatggcgttttccagaatatgatgatattttttggcaaggcacaattctttagtagatatattgtttgattcggtactgacaaaaataccaatctttgtttagttgctagcaaatgaaaaactaatgtgtctatgagttgtgcagatgtcattggattagttgtgcatgtcggggacattgagttcaggagtttgtatttgcgtcagacgccgacaaggataatcgcgctggttaatcctaggtacgacatgctccatttttttacatgtattaattaattgagatcacacaacactcatgttgcatataatttttgtaaatcaggttgcagataattttcgttcgtgtatgggaccaacaacttacccgcaacttgactaggtggcgctcagcacggacacatttcgattgttttgtggctacgctgacgagggtggacagaagagcaggtaaggaagcccccctctatttctctaacatatttgccaccgtgataaatcacatattttaaactaactgacattttccttttgtagatgaactatcaactacttatgagtctgacataatttttaatcctgattcagcatcagcaaatgaattcaatgttttgcgccaggcattagcagtatcaccttctaatgttcaagagcaggttgaagagtctatcggtagaagaaaccttcataattatcaacgccaaaactagaagatttaaatgaaggcaactatagttgcatttatttcgcatacatataatgatttttcgcttccaagtttttatagtgtcatcagctttgttgcttactcagaataagcatcacaattttataatctcaatatgatacaaaagttgtatgccactcatataaaatgatgtccatgaatctctatgaaaagcattttttacgtgcgatcaagatgatttttccgagcggaggatttgaccgtatgtacctgagtgtctggaaaactatatattttcacgtgcgggcggcccaaccacattgtataatcgattaacccgtgcggccaaatcataccgtccgcatggaaacaaattaaaacgcaaaaatcactgcctgcccgccggccagcacgcatccggccaccgcaactcgtcgtcgccgtcgtcgcaccgcatcacgcatccggccgacgccgccatgaccagccgcggccgccgcacacacccgaccgccgccacactgcataatcgattaccccgtgcggccaaatcatacagcacgctcagaaaaaaaaattaaaacacgaaaatcgctgcccgccttccgccccgtacgcaaccggcgaccgcaactcgtcgtcgtcgtcgtcgcacagcagcacgcctccggccgccgccgccgtgaccagccgcggcagccacacgcacccggccgccgccacaactcgtcgccgtcgtcgcgccgccgcacgcactcggccgtcgtcacgtcatccgaaaaattgttttatatctaaatcgttcgctcgttgcttgcttctggtacttcaaaagctaagtgctttgatttttttgcatgctactatgcactcgtcctattaataactgagaaaggatgtatacaagctatgggcctgatcggcccatatcacggtgcaatgaaacatgacgagctgcttccgttttgtcgccgcgagattgccgccgcgcgtgtagcaccgaccttccgtttatcccgtcggttcccacccaggcatcccatccactgcattccaatcgccgccgcatccaagcgcctttcatcggcggtcggctgccgcgaccgcgacgacgctgccgccgcaagtgcaacacttcaaatcgatcttcaactgcaactgaattttgaagaggtgcctttctactgcactatatgtgaaataagaggtgagagcaacaccaccacgttcttgtggtatactctcgtttgttgcaaattgaatttccatgttatctgtttgtctaatattacaattttttttggcaacttcaatgattcacttccaatagagtgtcaattacaacaacatgatgtcggcaaattatcgcacacacatctccaaccgggttcatgcccccgcgtcagaacagtcgcctgatgcatctcaacctgtaacaatcaaaaaaccatttaacaggaaaggatatttcacatgtttgttattcttcttttatttgtcattttgtgcaaaaatttttatatcaaattttcgtaagttgagggtacgtacctccttttgtatgtttaccgttactttatgcatggctgcaggtcagtagagttcgatgagattaagatggaacacgtcttccgaacatgctggaaggtgagtgcgaaggtggtgttcaaatctcccatgcagcaaaacaaatttggtgctcaatatattcggtttatcctaaaggacacaacggtatgtcacaccaatcacctctctcctcctaattgctagatataatggagcgttgtgcacaaaagttatggaaattatgcctttattctatatgtacaatttaaacgtaggatacaaggatggaagcactagcgtatgaccagcaagcagatcgttttaatggaaccatacagagtggcttagtctataattttactaatgtggggttccaaccgaccgatgtgcctacctatgccaacctaaccatgcaagctaagttttgtatgattctgacaccaaagacagccctacgcaagcctcgttttgtagacttcagtgctatttttaccgacgcgataagtgatgatatgttcataggtaaagcaacaaccttcaataactattttcatccctttttttgaactctatagttatgttcattacataaatattcgttcagatgttgttggtgtgcttatatacgtgggagaaatacatcatcaccaactttatggacaaagcttacctactagggatattgccttggttaatcgtcggtgagttcattttcagtttttcctttacataacatgttctcatattgtgagtggtccctaatccacttttagtactacagatataaggtaatctttcttcgaatttggggtgaatatgcatctcgacatacagtgtggtggcaagcacttgcatcatagtattactgcatgtctgctacatgtctcaagaaattagatattctaaccggtaagtaacaaatcatcctaataggaattactatttgaccattttgtttgcgaggtaatagaactgaacactgtcagactgacttgcttatcgtgcagagacattaactactacggtggactccgaattgaccaactctacagattcactcagtgcacctgagttgggcgtgattcgtcgtttattcgttagttctcgtgaggatgctcaacggttcactcaagcagtcgtttccttgagagcgaaatttattactattgcttcccttttagaccgattggatcctcaaggaatcatcagacgagatgtgcctttgatacaacaagaggatactatcgcccgttttaaaaaagcttaagagattgcttttagattcatgattttcgttatatgtttaacatttgtagggatgctctggtctattaacgttgttttttgggtcgtagaaacataaattaaaatgtcctattatttcgattatgatgatttgttatgtccggatttggtccggtatgttcgaaccagataaaaaaacacatggttttccgatgatgcatatgttcccccttgcaatgcacgtgttattttcatacacaaattaaaccagaactataatattatgaaaaaatattttacgtcctaattaattgcatccggtttgttcagaccgtttcgaccaaaaaatttaatcgtgatacattccctttattttttttaacgagatatacttacgtgcacggtccaacaattttgttctctcaatttttttccttctaattttaatcgtacccatgatatcggatttattcagtttcccgaagattgatggacaaaataatcgaaggaaggaagaagcgtgaaactgcctcgactcctgcgtacccaggacacgtgataaggcccatcaactcatccagattaaggcctatataatattagtcagtcaagaatcactttcgacttgattaggcccatcaactcataaagattaagccctatataagataagctggtgccctgtttccttgctaagtgttgccgtgatattcagtttgatctgctcgtcgtatcgccgccgcacaactcgccgaataccaaggctggtaaacaagcgccgccgccgtcgcaaaatccaccgaaaccagactacgcgaccaccacacgatggatgcatcgccgtcaaatccgccctcgtcgactccgccacatccgcagactcctccgccactactgttgttgacgacgccgccgccgccgccagtcccgtcgtcgccggctccgccgccgtcgccgccgctgccgccgtcgccgccgccgccattgccgtcgccggctcctcctccgccgcccttgccgtcatcttcggcgccaagcaatgtcagcacagatattgatcctgtaagttaagcacccagcttaattagtccatgaagactatcgatacatatatatatatatatatatatatatgtgtgtgtgtgtgttctattgcgatttgggttacttatagcaggcagtacattagctagctaatgttaatgcatggtactgtagattaatgctatacactgtacgttacttgattattaattaaagcacctagctcgccatccactattatattaaaaaattattacttacaaatatgtcaattgcattaatatatactcctacactagcttgtgcgtagtgctcagggttgcttctttacttatatgaggaactcatctctcgcactcgcaaaaccgagggactcattaacgtatgattaattaaatagttttcaattagaacaaatagatttttatggttttataaaataactctaacaacataactcaacataaaatcaacctggccctcagcttattttacaaataatatataatactctgagtggtatggttcaccaagaaaaaaagattaatagctatgatcgagcaaaataaagcattgcaccaacttatgcaacaataatattgacatccctgccgacgtgttttttgtttagtgttatatataatttccatatgcaatatagatatccttgcttaatctcatgtggtactcaggtcaatcaagacgccattcatgctgatatgattacaaccccaccctcgaagaaagcaaaaaattcggaatccgaggagcatggagtatccaaagtcagcatgccaaatattgatgtaccatcaaatttgatacgatctatgtttggccagacctacaagtatctccctcaaggtacattattgttttcacatactcccttcattccacaatgtacggcaaaattactttttcaagttgtttcataatataaggcatatatgcatgcatgtcattaactaacacctcttctccactaaaatattattattttaactctccactaagacctctaattttattgggtgcatgcataattatctcttggtctttggtttaagagtggttgtgctttatatataaaactttgtgatatcagaattcatttttttttgttttacagattatgaattaacaaatgaggatgtaatggccatatttttaattgaagattcggctgaaaattgtacactggtggacatgggtcatttttataacaagaaacgtcacttaacgtgccttctctctggagataaatttttgaacgatgatgtaagtaaaactgcctatgatgaagcaacgttacaatttaattgccaacatattctttagtaattgcagatttttaattgaatcaacaggtcatcagtgcgtacatacactgtttgagtgagcaagcaaataacgataagaaagtgaaatatgaaaacccgtttctttctgacatgctgaaagcggctggggtcaatggagtaaatgaagatgaagataactttattacaaagatagtgaagaattacctacaccatgaactggtattgtttggctctctatatttgatagtatttaagtttattatttatttatatatatagatataatataatataatatatgtcctaactccatatgtcttgtttagatttttattccaataaatatgaaagataatcattggtatttagcggttgtcaacatagaaaaaaaacagatacaagtacttgattccatgtgtatgacattcaatcgtgctgacctcgcaaatacggttagtgtatatgacatgtgaactctcttttttttttaagattgtaattcatttatgtatattgctgactgtaaatatgataattgagcagctacaaagactacaatatcatcttaatattattggacggcaacaggacttgcctagccacaaatggggtgacctcaatgttatcaagtggccaataatagaacaactaaaagaaagaattcaggaagacaggtatactacaaataaatttttcatgtaatataatattaatataagatgaatgatatatttcaaatggtgtacggttgtttagtttttaatagttgtacttatactttaaaacaatgcagttcttcatgtggactattcatgctcaaacttatggagaattggacaggagaatcactttctcgttctattacacaggtgtgtttcttaataaaaaaatagttgatcaaatatcttatctatttaaaattaaataaatttactttttaatgcgcaggaggatattacactttttaggtccaaactagccagtgtattattacgttggaaaacaaataaggcggtcatgacgaccggggaacaaatcgaagataccaaagatagtgatgacgatgttgttatattaggtagtcatcaacggaaattcggctctacaagggacatcaataaaactaaagaagtaaacaaaaaatatagttcactactctctgtagtatctaagatgagtaaacaagagttgataagcggccttctgcactacatccaacagattaattgtgctgaagccatggagtaagccactgcaatgcattgtatacacaatcgtaattcatatatgcattaacttattttctttgattgacaggaaaatatgggtacaaagttcaaggccgcactatattagcttgagtctcaaacagcttcaaacaatactaaagaaggatgagccattggaaagtgattgcttcaacatggctattcgtaagttcatgtatgaaaaaatcgagatgattcataaaactaaacaagcaatatcgaatcattgcttggacttgcaattttgggtaagtttttaaattctaatgctcatgtcattctctattgctcatgttattacctataatcgcaatatcgaatatattgatttatctattgcttatgtaattgaaccattttttaaatcatgtagagtgctactggctttggtaaagtcccggtccaccatgacaacataaatcttgcagagaccgtcggtagttggtcggaaattcattacaaactttcacagtgcaaagcggtaagatcgctaagataccatcctatatggccgtgttttatatattatcttgacggatgatcttttgtagattcttataccagtacgccatgctcgaagttttatcgtgcttgtagtggaccaagaaagtcaaacgctctatgtgttagacccaaatccacttatgccagaatataaaaataacccaaatatgagatacaccagaaaactgataactatttgtgatcacttcaacaaagctatgagaaaggcatgccctggctctaggtggaatgaagacatcaacttgtggaggcaagtaattgtcaataatccggtttacagcaggtaa</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071031.2 RefSeq:Os10g0388600]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 10]]
 
−
[[Category:Chromosome 10]]
 

Latest revision as of 12:42, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information