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| − | {{JaponicaGene|
| + | The rice '''Os02g0236100''' was reported as ''' Docs1''' in 2012 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os02g0236100|
| + | <br> |
| − | Description = Similar to SERK1 (Fragment)|
| + | ==Annotated Information== |
| − | Version = NM_001052924.1 GI:115445218 GeneID:4328829|
| + | ===Gene Symbol=== |
| − | Length = 4643 bp|
| + | *'''Os02g0236100 <=> Docs1''' |
| − | Definition = Oryza sativa Japonica Group Os02g0236100, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''Docs1''' might directly or indirectly regulate multiple genes involved in the proper development of root outer cell layers in rice. |
| | + | <br> |
| | + | ===Expression=== |
| | + | *'''Docs1''' mRNA was expressed in all tissues including roots, leaf blades and sheaths, and flowers. |
| | + | <br> |
| | + | ===Mutant=== |
| | + | *'''Docs1''' was isolated by map-based cloning using a mutant (c68) defective in the outer cell layers of primary roots. It encodes a leucine-rich repeat receptor-like kinase (LRR RLK). |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *Institute of Plant Science and Resources, Okayama University, Chuo 2-20-1, Kurashiki 710-0046, Japan, and |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602 Japan |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | <br> |
| − | |
| + | ==References== |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| + | <references> |
| − | AP = Chromosome 2:7740096..7744738|
| + | <ref name="ref1"> |
| − | CDS = 7740387..7740704,7740807..7741198,7741443..7741778,7741871..7742023,7742092..7742165<br>,7742366..7742425,7742525..7742596,7742684..7742827,7744065..7744136<br>,7744250..7744382,7744472..7744580|
| + | A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots |
| − | GCID = <gbrowseImage1>
| + | </ref> |
| − | name=NC_008395:7740096..7744738
| + | |
| − | source=RiceChromosome02
| + | </references> |
| − | preset=GeneLocation
| + | <br> |
| − | </gbrowseImage1>| | + | |
| − | GSID = <gbrowseImage2>
| + | ==Structured Information== |
| − | name=NC_008395:7740096..7744738 | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>atggcggggccccgcgccctcgccgtggcggcggcggtggtggtcgccgcgtgggccgtcgccgccgccggggacccgccgctgtcgcccaaggggctcaactacgaagtggcggcgctgatggcggtgaagagcaggatgcgggacgagaagggggtgatgggagggtgggacatcaactccgtcgacccgtgcacctggtccatggtcgcctgctcccccgacggattcgtcgtctcgctgcagatggcgaacaacggattggccgggacgctgtcgccgagcatcgggaacctcagccacctgcagacaatgttactacagaataacatgatatcaggtggcattcctccagagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgcgcctagataagaacaacttgtctggacagatccctgaagatgtcgcaaagcttccaggtctcacattccttgatttatcatccaataatttgagcggcccggttccaaaaatctatgcacatgactacagtattgcaggaaacaggttcctttgcaattcatcaattatgcatggttgcaaagatctcacagtattaactaatgaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcatttgttggctaaaatattgcagatggcgcttgccttttgcttctgctgaccaagatcttgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaatttcaactcaaagaacatattaggtcaaggtggctttggtgttgtttataaaggctgtctgagaaatggagctttggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgattggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccatatatgccaaatggcagtgttgctgatcgcttgagagattaccatcatggaaaaccatctcttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaatcattcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggattttggattggcaaaacttcttgaccgacaagaatcacatgttactactgcagttaggggcactattggacatattgctccagagtatttatcaacaggacagtcttcagaaaagaccgatgtttatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagattgggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaatattcatttgatttcgccgagttggagtgttctgttgacgtaattctgcaatgcactcagaccaatcccattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatctggtcccagatga</cdnaseq>|
| |
| − | AA = <aaseq>MAGPRALAVAAAVVVAAWAVAAAGDPPLSPKGLNYEVAALMAVK SRMRDEKGVMGGWDINSVDPCTWSMVACSPDGFVVSLQMANNGLAGTLSPSIGNLSHL QTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNL SGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYSIAGNRFLCNSSIMHGCKDLTV LTNESTISSPSKKTNSHHQLALAISLSIICATVFVLFVICWLKYCRWRLPFASADQDL EIELGHLKHFSFHELQSATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDIT GEVQFQTEVELIGLAVHRNLLRLYGFCMTSKERLLVYPYMPNGSVADRLRDYHHGKPS LDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLD RQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQ KGMILDWVREVKEENKLDKLVDRDLKYSFDFAELECSVDVILQCTQTNPILRPKMSEV LNALEANVTLPENGIDLNREVPPYGGSCSFSVRHEDPHDSSSFIIEPIELSGPR</aaseq>|
| |
| − | DNA = <dnaseqindica>4035..4352#3541..3932#2961..3296#2716..2868#2574..2647#2314..2373#2143..2214#1912..2055#603..674#357..489#159..267#agtattatactcgcgcaggcgcccatggccgccaagcccgagctcctgctgcagcgtagcccacctcaagccaccgcctccgcctccgccgccgctgctgcgctgcgcccgcgcggcctcctcctcgccctccccggcgtcgccgtcggactcctctcatggcggggccccgcgccctcgccgtggcggcggcggtggtggtcgccgcgtgggccgtcgccgccgccggggacccgccgctgtcgcccaaggggctcaactacgaaggtgcgtgggttgggtagcgtgggttttggttggggaacgggaaccctaggtgggttagggttttgatatgatgtggggggtttttgcagtggcggcgctgatggcggtgaagagcaggatgcgggacgagaagggggtgatgggagggtgggacatcaactccgtcgacccgtgcacctggtccatggtcgcctgctcccccgacggattcgtcgtctcgctgtgaggattcccctctcctgattcgttcgtgggattttgttattgctgctgctactgctcgtggtggtggtgttgattatggcggttttggttggattgctgtgctgctgcaggcagatggcgaacaacggattggccgggacgctgtcgccgagcatcgggaacctcagccacctgcagacaatgtaaggggttcttgaacgaattcattcgaaccttatcaaatgcaaaggttttgttcttgttccattaatgcatttattagtgagcacggattgtctcatagtcgtagcactgcaaaattagttgagctgggttggtaggatcagttttccccaactgttgttttggatttggtaccatccgattggtgattgatcgattgatatctccatagttaaagagctggaaagtgagggcattaccctatgggctatgtctcttgtagttgaacttaggagaactccatgtagggtccgtgaacactgaacatttactctccagagccaggccaagacagatgtgtaaaatacatcacttgagagatgacagctgacatagcatggcacctctgaataaaatttcattttcttcatctgaaaagagtgggggacagatgccatgccatggcatctccatttttaatattttttatagaccttcatgtgggcaaatgacacttttcgtacaactgaagcatttccaatgctagcattggaacaccattttcatgtgagcaagtcacacttcctattagttataataaatgacattctcaggattcaaggcctggtaataatgaatgtgcggctcaccttgtttggtctaagtatcattgaaatagatccatataaagagttgagataatcatgactcactaattagtgcattttctgttctataaacatttttctgaaccttgcagcactagaattcataaccaaagtttgtctacagacccaaacgtgaaaattatatgcagattctatagcaattattatttttagtatataaatagtctggaagtatattgtcaccttaactgactgctttagtagaaatgtatcttaatctgtagagagattcatgtttcttttggctaaccctacaaatcagaatgatcaactgtgctgcatatgtggattgaaggctattactatgtgaccactatagaatattcatttgattcatatttgaatataacattgaaatgtttatgagtatggtttgtccaacatttgattgtcttcatcctatttgtaaggacatgagcatattacatcttgcagtgtcatatacttaagttgatcgtgtattcatactgattcccatgaacttgtttgcttgacatctgtctgtcctcataaaatgaaacaaaataccattacttgattactcaacatttttattgtcttcattcaggttactacagaataacatgatatcaggtggcattcctccagagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgtgagcagatgccaaaatattgcttcaaattttgtgccacatattttgcttgtcccaaaatatgacttctgtttgtgaatccttcaggcgcctagataagaacaacttgtctggacagatccctgaagatgtcgcaaagcttccaggtctcacattcctgtatgtctcttttcaccactttatattctctcttctgttataaatgttgtgtataaacgtaattattgatttttacccaacatgggaaaattgtttcagtgatttatcatccaataatttgagcggcccggttccaaaaatctatgcacatgactacaggtaagttggtgagagtgcgtacgataagctctgcttatttccttccatttgcttaaccaaagtgtttggcacctgcatattttctgtgttcttatgctaaactaagcgtaggcacataattccttcccaaagcatatgcacataattccttctcatcagttttaataccctcctgatgatcactttcctctgatttccagtattgcaggaaacaggttcctttgcaattcatcaattatgcatggttgcaaagatctcacagtattaactaatggtaattgtttacctgatgtcatatacttgcatatttatctgttggacctaatttgccttcctttgcagaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcatttgttggctaaaatattgcagatggcgcttgccttttgcttctgctggtaattttcaaagggttaagcatctactctcttattgcagagttcagaatatatagcatctgataaacattcttttcttttgttacttctagaccaagatcttgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaatttcaactcaaagaacatattaggtcaaggtggctttggtgttgtttataaaggctgtctgagaaatggagctttggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgattggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccatatatgccaaatggcagtgttgctgatcgcttgagaggtaattacaatcgtccaaaacaaattttgattttatgttttaatatagctgggccagtttccagttgtagttcttattgaaggtagactgttgttgatccaaaagctaaaatgatgattatgtaaaactatgatagcttccttacaaagatgtgtgttgtgatcctgtgttggttgattttgcatcattctcctatcatttcttttccatttcactctcttactaacacaaagttaatttgtagattaccatcatggaaaaccatctcttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaatcattcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggattttggattggcaaaacttcttgaccgacaagaatcacatgttactactgcagttaggggcactattggacatattgctccagagtatttatcaacaggacagtcttcagaaaagaccgatgtttatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagattgggtatctccttttagttcaatctttatctaattacctaactactgtcatttgatgcccatatccttgtatactttcttaccacctaatcttaattctctgcaggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaatattcatttgatttcgccgagttggagtgttctgttgacgtaattctgcaatgcactcagaccaatcccattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatctggtcccagatgatcacaattgtacatcaggggggagaaccacaaacaaaaggatgacaattgtacaaaaacgtgtatagtctggatgtagttttacttggaatctgcaaggagtttgctggtgttgcaaatgcctcacgatccaatctctaactgctaggtagatcggtcatttctggtcgtgttggcgtatgcactgtacagtgcaaatcagtatgctacccatcctacaatatgttctcgagaaaattacattgcatcttgcatgtttttctcagttacaagaatcagtatgaaagagccc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001052924.1 RefSeq:Os02g0236100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 2]] | |
| − | [[Category:Chromosome 2]]
| |
