Difference between revisions of "Os02g0595900"

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(Created page with "{{JaponicaGene| GeneName = Os02g0595900| Description = Conserved hypothetical protein| Version = NM_001053852.2 GI:297599531 GeneID:4329861| Length = 2009 bp| Definition ...")
 
 
(8 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''Os02g0595900''' was reported as ''' OsNAR2.1''' in 2011 <ref name="ref1" /> by researchers from the China.  
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GeneName = Os02g0595900|
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<br>
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Description = Conserved hypothetical protein|
 
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Version = NM_001053852.2 GI:297599531 GeneID:4329861|
 
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Length = 2009 bp|
 
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Definition = Oryza sativa Japonica Group Os02g0595900, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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[[File:39.png |right |thumb |345px |''''''Figure 2. The OsNAR2.1 mRNA and protein levels in osnar2.1 knockdown mutants (r1 and r2) and WT plants. '''''']]
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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===Gene Symbol===
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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*'''Os02g0595900<=> OsNAR2.1'''
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|
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<br>
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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===Function===
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AP = Chromosome 2:23979002..23981010|
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*OsNAR2.1 plays a key role in enabling the plant to cope with variable nitrate supply.
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CDS = 23979232..23979692,23980756..23980915|
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<br>
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GCID = <gbrowseImage1>
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===Expression===
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name=NC_008395:23979002..23981010
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*OsNAR2.1 was mainly expressed in roots and induced by nitrate and suppressed by ammonium and some amino acids.
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source=RiceChromosome02
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<br>
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preset=GeneLocation
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</gbrowseImage1>|
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===Mutant===
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GSID = <gbrowseImage2>
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*Knockdown of OsNAR2.1 by RNA interference synchronously suppressed expression of OsNRT2.1, OsNRT2.2 and OsNRT2.3a in the osnar2.1mutants. Both high- and low-affinity nitrate transports were greatly impaired by OsNAR2.1 knockdown.
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name=NC_008395:23979002..23981010
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<br>
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source=RiceChromosome02
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==Labs working on this gene==
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preset=GeneLocation
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*State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences,Nanjing Agricultural University, Nanjing 210095, China 
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</gbrowseImage2>|
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*Disease and Stress Biology Department, John Innes Centre,Norwich Research Park, Norwich NR4 7UH, UK.
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CDNA = <cdnaseq>atggcgaggctagccggcgttgctgctctctcgttggtgctcgtcttgctcggcgccggcgtgccccggccggcggccgccgccgcggcgaagacgcaggtgttcctctccaagctgcccaaagcgctcgtcgtcggcgtctcgcccaagcacggtgaagtcgtgcacgccggcgagaacacggtgacggtgacgtggtcgctgaacacgtcggagccggcgggcgccgacgcggcgttcaagagcgtgaaggtgaagctgtgctacgcgccggcgagccggacggaccgcgggtggcgcaaggcctccgacgacctgcacaaggacaaggcgtgccagttcaaggtcaccgtgcagccgtacgccgccggcgccggcaggttcgactacgtggtggcgcgcgacatcccgacggcgtcctacttcgtgcgcgcctacgcggtggacgcgtccggcacggaggtggcctacgggcagagctcgccggacgccgccttcgacgtcgccgggatcaccggcatccacgcctccctcaaggtcgccgccggcgtcttctccaccttctccatcgccgcgctcgccttcttcttcgtcgtcgagaagcgcaagaaggacaagtag</cdnaseq>|
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<br>
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AA = <aaseq>MARLAGVAALSLVLVLLGAGVPRPAAAAAAKTQVFLSKLPKALV                    VGVSPKHGEVVHAGENTVTVTWSLNTSEPAGADAAFKSVKVKLCYAPASRTDRGWRKA                    SDDLHKDKACQFKVTVQPYAAGAGRFDYVVARDIPTASYFVRAYAVDASGTEVAYGQS                    SPDAAFDVAGITGIHASLKVAAGVFSTFSIAALAFFFVVEKRKKDK</aaseq>|
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DNA = <dnaseqindica>1319..1779#96..255#agcatcagcagcagcagcagattcatttcttggtcttcgtctccgtctccgtccttgggttgatatccagaatcagtcggtttggtttgtcagcaatggcgaggctagccggcgttgctgctctctcgttggtgctcgtcttgctcggcgccggcgtgccccggccggcggccgccgccgcggcgaagacgcaggtgttcctctccaagctgcccaaagcgctcgtcgtcggcgtctcgcccaagcacggtgaaggtatataacaactagtagctgatgatgatgaccttcttgcttctttcttacaaaaaccgtttgaccattcagttactgatcgagcagttaacattttgccaaaagttatttggtttgattttttttttgaacttggccggtttatccagcggtttctaaattcgaaccagctcgacaagaccgacaaccaggcagtttactgttgcattttgaaaccgtgtttgaaccacccaagattgctcttgattagcatgcagcattatgaaccgaaaatgctcttcatggctacctagctagcgattataaaaaaaaagtatttttcgcctaaagtttgatgtaaaatcagccttaagaatatgttccgatacccatttgcgcaactgaaactccgaatgatgatttgtctgatttgtcgcctgtgatcgatgcatccgaaaagggatgaacagcaagggagaagaatatgtccctaagaaactcctatcctagtgatagccaggccggcctatgctattcttttattttaaagaataataataataagatttttttttctcatttcaagttcacttcattttctcatggccgtactacaaaatcttttttttttgttagctcactttcgtttatctttttcttttttaaaaaaaatcatgataagtgcacgttaggcttcgttgaatttggctgttaaaataatcagattaaaagtgtcacatgtactttggctactactctctccgtttcatgttataagacgttttgacttccgtcatagttaaactgtttcaagtttaactaaatttatagacaaatatatgtttaactaagtttatagataaatatagtaatatttttaatactaaattagtttcatcaaatcaataattgaatatatttttataataaatttgtcttgggttaaaaattttactaattttttctataaactaagtcaaacttttaactttgatcaaagttaaaacgttttatatcctgaaacgaaaagagtactactattactaatcactaatcaagggaaaattattccggtggtgagcagtcgtgcacgccggcgagaacacggtgacggtgacgtggtcgctgaacacgtcggagccggcgggcgccgacgcggcgttcaagagcgtgaaggtgaagctgtgctacgcgccggcgagccggacggaccgcgggtggcgcaaggcctccgacgacctgcacaaggacaaggcgtgccagttcaaggtcaccgtgcagccgtacgccgccggcgccggcaggttcgactacgtggtggcgcgcgacatcccgacggcgtcctacttcgtgcgcgcctacgcggtggacgcgtccggcacggaggtggcctacgggcagagctcgccggacgccgccttcgacgtcgccgggatcaccggcatccacgcctccctcaaggtcgccgccggcgtcttctccaccttctccatcgccgcgctcgccttcttcttcgtcgtcgagaagcgcaagaaggacaagtagatcgtcttgctgcaaacgcaagttcgcagcttcagtggactgaattccgttatcggaaaaaaaaaaggaaatgcgtactttagcttgctgttataaatgtatacagtgatgttctcctcggatataattttgtgtttgtttttaccttttttataaaaattatatgtaccttttgtttcttatttttgtttggtcacgtgcaacgaatatgaaaataaattggttgctgt</dnaseqindica>|
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==References==
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053852.2 RefSeq:Os02g0595900]|
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<references>
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}}
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<ref name="ref1">
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[[Category:Genes]]
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Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration rangespce_2335 1
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[[Category:Japonica mRNA]]
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</ref>
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[[Category:Oryza Sativa Japonica Group]]
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</references>
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[[Category:Japonica Genes]]
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<br>
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[[Category:Japonica Chromosome 2]]
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==Structured Information==
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[[Category:Chromosome 2]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

Latest revision as of 09:04, 15 October 2016

The rice Os02g0595900 was reported as OsNAR2.1 in 2011 [1] by researchers from the China.

Annotated Information

'Figure 2. The OsNAR2.1 mRNA and protein levels in osnar2.1 knockdown mutants (r1 and r2) and WT plants. '

Gene Symbol

  • Os02g0595900<=> OsNAR2.1


Function

  • OsNAR2.1 plays a key role in enabling the plant to cope with variable nitrate supply.


Expression

  • OsNAR2.1 was mainly expressed in roots and induced by nitrate and suppressed by ammonium and some amino acids.


Mutant

  • Knockdown of OsNAR2.1 by RNA interference synchronously suppressed expression of OsNRT2.1, OsNRT2.2 and OsNRT2.3a in the osnar2.1mutants. Both high- and low-affinity nitrate transports were greatly impaired by OsNAR2.1 knockdown.


Labs working on this gene

  • State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences,Nanjing Agricultural University, Nanjing 210095, China
  • Disease and Stress Biology Department, John Innes Centre,Norwich Research Park, Norwich NR4 7UH, UK.


References

  1. ↑ Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration rangespce_2335 1


Structured Information