|
|
| (3 intermediate revisions by 3 users not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | The rice '''Os02g0614100''' was reported as ''' bc14''' in 2011 <ref name="ref1" /> by researchers from the China. |
| − | GeneName = Os02g0614100|
| + | <br> |
| − | Description = Protein of unknown function DUF250 domain containing protein|
| + | ==Annotated Information== |
| − | Version = NM_001053957.1 GI:115447284 GeneID:4329973|
| + | ===Gene Symbol=== |
| − | Length = 4071 bp|
| + | *'''Os02g0614100 <=> bc14''' |
| − | Definition = Oryza sativa Japonica Group Os02g0614100, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *The inferior mechanical strength and abnormal development of '''bc14''' plants suggest that OsNST1 has pleiotropic effects on cell wall biosynthesis and plant growth. Identification of OsNST1 has improved our understanding of how cell wall polysaccharide synthesis is regulated by Golgi NSTs in plants. |
| | + | <br> |
| | + | ==Labs working on this gene== |
| | + | *State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy ofSciences, Beijing 100101, China; |
| | + | *State Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310006, China |
| | + | <br> |
| | + | ==References== |
| | + | <references> |
| | + | <ref name="ref1"> |
| | + | Golgi nucleotide sugar transporter modulates cell wall biosynthesis and plant growth in rice |
| | + | </ref> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | </references> |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | <br> |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ==Structured Information== |
| − | |
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| |
| − | AP = Chromosome 2:25093529..25097599|
| |
| − | CDS = 25093732..25093888,25094742..25094818,25095161..25095319,25095422..25095555,25095932..25096062<br>,25096147..25096191,25096282..25096379,25096613..25096720,25096808..25096864<br>,25097333..25097407|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008395:25093529..25097599
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>| | |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008395:25093529..25097599
| |
| − | source=RiceChromosome02
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgaagggagggggggcgctgctgccgatgtccgcggaggcggggaagggcaacgggggcgggggcggcggcggcgacgatgccgcgctgttcaaggggtccgccatgacgcggcgcggcgcggtcgccgcgctctcctacatggcctgctccgtgttgctagtgatgtttaacaaagcagcactgtcttcatataatttcccctgtgcaaatgtcattacgctccttcagatggtgtgctcaacaggccttctttatgttctgaggcggctaaagataatttcatttacaaatagcgagccatccgtgccttctgatgcgttattcttcgttccgttcagaatactgttgcgtactacacctctttctttggcttatttactctatatgttagcttcaatggaatctgtgcgtggagtcaatgttccgatgtatacaacactgaggcgcacaacagtagtctttacaatgacaatggagtatttcttggcaaaacagaagcatacgccacctataatcggcagcgtggctttgattgtatttggagcatttatcgctggagctcgagacctgtcgtttgatgctcgtgggtatgctattgtctttgtggccaacattacaacagctgtttaccttgctactataaaccgtataggaaaatctagtggtctaaatagcttcggcctgatgtggtgcaacggacttgtctgtgggccttcagtactttttctgacatatattcagggtgacctgaagaaggctatagaatttccctacctctattcccctgggtttcaggcggtgctgctattctcatgcatgctagcttttctgctaaactacactatcttctggaatacaatcctgaattctgcactcacacaatcgatgtgtggtaatttgaaggatttcttcaccgtcggaattggctgggttctgtttggtgggcttccttttgatctgcttaatgttatcgggcaaggtcttggctttcttggctctggcttgtatgcctactgcaagatcaaagggaagtag</cdnaseq>|
| |
| − | AA = <aaseq>MAKGGGALLPMSAEAGKGNGGGGGGGDDAALFKGSAMTRRGAVA ALSYMACSVLLVMFNKAALSSYNFPCANVITLLQMVCSTGLLYVLRRLKIISFTNSEP SVPSDALFFVPFRILLRTTPLSLAYLLYMLASMESVRGVNVPMYTTLRRTTVVFTMTM EYFLAKQKHTPPIIGSVALIVFGAFIAGARDLSFDARGYAIVFVANITTAVYLATINR IGKSSGLNSFGLMWCNGLVCGPSVLFLTYIQGDLKKAIEFPYLYSPGFQAVLLFSCML AFLLNYTIFWNTILNSALTQSMCGNLKDFFTVGIGWVLFGGLPFDLLNVIGQGLGFLG SGLYAYCKIKGK</aaseq>|
| |
| − | DNA = <dnaseqindica>204..360#1214..1290#1633..1791#1894..2027#2404..2534#2619..2663#2754..2851#3085..3192#3280..3336#3805..3879#gggcaccaggaaggcggagagagaagaagttttccgcatcgcgaccgcgcggacgaggcaggctggccgtcggatcgggctgaccgcgtctcgtttagaaatatcctcgtgacttctcctcctcctgagtcgtcgtcgtcgtggtggtgctcgtcctcctcggcggcggaggcttcggggggcgggagatccgggcggcggagatggcgaagggagggggggcgctgctgccgatgtccgcggaggcggggaagggcaacgggggcgggggcggcggcggcgacgatgccgcgctgttcaaggggtccgccatgacgcggcgcggcgcggtcgccgcgctctcctacatggcctgctccggtacgttcccccgatccgcgccgcttcttcttcttcttcttctctgatgcgtcggctgggtctcgggatgcggtcgtcgttagcgagaatttgagggtggcgtctcgtgatgcggctgcgaatttggggggtagcgcgtggttggggttcctgcgggttcagctcacgaatttgtactactactaggtgacttttggtttcagttttggtcgttaattcagttggattcgattatctttgggaagagggccggttggttgacttgtgtccaacaacttcagaaaaaaaagttcatccattttggcattacacgcaaagtacatgctgcgtggtgcttggaaattcgtgggggtttcacttgacggatgtgttccgggggtctgggaggctgcttgcatcttcaacattaaatactaggacaggaggtgctaagtggtcagcggctgtacaaacatcattatgtagtaattactgtcagcgtttcagtgaaaatctacaaggataataaccttttagaagagaaaaactgcgtttggtgaaaattctgaaacttttgtttcgggtttggccatgatggcagatctgcgaagcaatcaaaatcgatagagatctctgagatgcagatagcatgtcgatgataggttgaaaacctggtgatgattgagttgagaatccaatattatgccacttagttgtccaacacagatagtcagctaggtggtgttcttatgaaacagggattagtcacttaatttcacatacggacatcttgttttcgttctttctacatttgttttcatttttcagatctcaggtatcattttactaactttggcaacttttcaatccgcagtgttgctagtgatgtttaacaaagcagcactgtcttcatataatttcccctgtgcaaatgtcattacgctccttcaggtacttctcatgtccccttggatggactctggaaagtctggctttgctgttatgttgtgcaagtgtgcattacacatttacacatgaataacttgcttgtagtctaggagataaactgtaggatagcataatcaaaacattacatattcgattttatctaatcaaagaacattctgaacttccgacccttacttgagcatctgcttagcaatggatattgctaaaggtcttttcatacctttatttgatatcactgttgatgaacttcttgatgcatatatgtaatctgctgctcgcatctcctgcctctttttttttttgacacttaataaacatgtgcagatggtgtgctcaacaggccttctttatgttctgaggcggctaaagataatttcatttacaaatagcgagccatccgtgccttctgatgcgttattcttcgttccgttcagaatactgttgcgtactacacctctttctttggcttatttactctatatggtatgcttctttcttcacttataatacatttattaaatacacttagtcgcatgtattctatttgaattgaatcctgagtaatgttttccatcatggtaaaagttagcttcaatggaatctgtgcgtggagtcaatgttccgatgtatacaacactgaggcgcacaacagtagtctttacaatgacaatggagtatttcttggcaaaacagaagcatacgccacctataatcggcaggtacatgtctataaaaatgatttttccttttttttactgtattataaattcgtaatattctcagaatagtctgacgtgctagtaactaatgtaagcttccttttgtcatatgctttcttatttatttctatatattatttccatcttttggaaaccctgaaattattagtctatcccagtgaactagcaattagtatctgttgctgttttttgttttctgtagcctattgctaactgttgtacctgtatttttgtagcttgaaataaggttgcagttgtagcacttgttttcttacgctaaaaatttccagaacattgttatgttctgaatatgccatattttactttctgattttttttaccatgggtttgtcagcgtggctttgattgtatttggagcatttatcgctggagctcgagacctgtcgtttgatgctcgtgggtatgctattgtctttgtggccaacattacaacagctgtttaccttgctactataaaccgtataggtaacatttcattttcagttttgccacatacaatcccattctaaactacatagctttctaaccagcagttttgttttgttttaggaaaatctagtggtctaaatagcttcggcctgatgtggtgcaacggtattattttgatgacctgtttcatattcataatatccagattaaaccatatttgccttagcattcatatcctatccatttggattccaggacttgtctgtgggccttcagtactttttctgacatatattcagggtgacctgaagaaggctatagaatttccctacctctattcccctgggtttcaggtacagatttcacagaaccatggtcatcactgatcttatttgtgcaatatctaccctccttttatctgtaatgtttttagacacctaaagattccagcacttctgggtgcaccatttttttaaaaaaagaaaaacacaatcatgcctgttcacttcagtggaggagtgacacatccaacttctgttattcttcagaaagctatcaatatcatatgatgttattccgattgtaggcggtgctgctattctcatgcatgctagcttttctgctaaactacactatcttctggaatacaatcctgaattctgcactcacacaatcgatgtgtggtaatttgaaggtataacagcctgcatccagttccttccactccaccaaacttgcaagttgttttttagtgtcctttcatatttacctttttctgcaggatttcttcaccgtcggaattggctgggttctgtttggtgggcttccttttgatctggtgagttaaatgtagtgtttgtttaggatggaaagaagatttgtctccttttccacgcgtgctttccgaactactaaatggtatgattttataaaatttcaaaaagttgctttaaataaccatcttaatctattttttaagtttaaataattaaaattcaattaatcatacgtcaatggctcaacttgttttacgtatcttctcaatcttcacttttcaggaaaacaagttgagccattgacgtatgattaattgaattttaattatctgaacttgaaaaatagattaatatgatttttttaaacaactttcctatataattttttttgcaaaaacacacaccatttagcagtttgggaagcgtgcgcgtgaaaaactagcagttttctcccccttctgcccggaacaaacacacccttaagtcttcagtctttccctgaataatgaccccaaactttcttatggcagcttaatgttatcgggcaaggtcttggctttcttggctctggcttgtatgcctactgcaagatcaaagggaagtagatacggatgtccagtgggggtctgaaggagagtagatattgaagtttattttggaggggccaatgtgccatactgaagtagagttcgtgctgtttgctcctgcatatgggagagaaattttgtaggttttcctgtatgtatttaacacttcagtcctcctgaatacaatttcgagtgaacagccattgtttt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053957.1 RefSeq:Os02g0614100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
| |
| − | [[Category:Japonica Chromosome 2]] | |
| − | [[Category:Chromosome 2]]
| |