Difference between revisions of "Os02g0649700"

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(Created page with "{{JaponicaGene| GeneName = Os02g0649700| Description = Peptidase M41, FtsH extracellular domain containing protein| Version = NM_001054119.1 GI:115447608 GeneID:4330159| L...")
 
 
(2 intermediate revisions by 2 users not shown)
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{{JaponicaGene|
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This gene encodes ATP-dependent zinc metalloprotease FTSH 7, chloroplastic, homologue of AtFtsH7. It is a predicted gene base on homology comparison.
GeneName = Os02g0649700|
 
Description = Peptidase M41, FtsH extracellular domain containing protein|
 
Version = NM_001054119.1 GI:115447608 GeneID:4330159|
 
Length = 6155 bp|
 
Definition = Oryza sativa Japonica Group Os02g0649700, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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Please input expression information here.
AP = Chromosome 2:27043137..27049291|
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CDS = 27043333..27044217,27045333..27045398,27045492..27045626,27045737..27045802,27045884..27046069<br>,27046145..27046231,27046353..27046466,27046542..27046666,27046743..27046851<br>,27047666..27047791,27047879..27048199,27048514..27048637,27048773..27048897<br>|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008395:27043137..27049291
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source=RiceChromosome02
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008395:27043137..27049291
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source=RiceChromosome02
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atggcctccgcctccgccgccgccgaaaccctcgcggcggcgtcgctccccgtcgcgtcgccttcgcggtcgctgctgcggccgctccccaggagagcgtccgcgggaggcggctgctccgcgtccgtacgaatctccgccgtgccgccgcgggggctcgggttcgcggtcgtccagcgccgcgtcctccgccgcccgccggcggcgcgcgccaacgtcgagcgcgaaggggacggggccgaagcgtccgggccaggagaggcgtcgtcctcctcctctggagatggggaccgcgacggggcggcggcggcggcggaggcaggaggtgatggcgccagcacgagcaccacgagcgcggccgcgacgcctccgcagccgccctcatcgaagaggggggagaacaagtggcggcggaagctgattaagggcggaggcgttgggcggtggctttgggagcccatagttcaggggagggaaatggggttcctcctgctccagcttgggttcgccatattcgcgctccgaatgctgcggcccgagatcgcgctgcctggctcagagccccggccacagacaacgtacgtcagcgtcccatacagcgacttcctggcgagcatagacaagaaccaggtgaagaaggtcgaggtggacggggtgcacatcatgttcaggctccgtcctgaggttgaggcccgtgcaatggagcagccacaggtgcagcgtggaacagattctgttgctgataatgctggagttccaaggcgaattgtcttcacaacaacacgtccagtggacattaagacaccatatgaaaaaatggtggagaatagtgttgagtttgggtcgccggacaaaaggtctggtggcttgctcaattcggctttggtggctcttatttatgttgtattaattgctgtagttctgcagcgattgccaataagcttttctcagcattcagcaggccagctgaggaatcggaagaattcaaactctggtggggccaaagtttcagaaagtaccgatatagttacatttgctgatgtggctggagtagatgaggccaaagaagagctggaagagattgtggagttcctaaggaacccagaaagatatattcgtcttggtgcgcgacctccacgaggtgtcttgttggtgggccttccaggaactggaaagacgcttcttgcaaaagctgtcgcaggggaagctgaagtcccattcataagttgctctgcaagtgaatttgtggagttgtatgtaggcatgggagcagctcgagtgcgtgacctatttgctagagctaaaaaggaatctccttcgattatttttattgatgagattgatgctgtggcaaaaagccgtgatggccgttatcgtatcgtcagtaatgatgagcgagagcagacactaaatcaattactcacggaaatggatggatttgacaccaactcagctgtcattgtacttggagcaacaaaccgagcagatgttttagatcctgccctccgacgccctgggagatttgaccgtgtagttatggttgaagctcccgacagatttggaagagaatctattctgaaagttcatgtgagcagaaaggagcttccgcttggtaaagatgtagatcttagtgacattgctgcaatgacaactggttttactggggcagaccttgcaaatttagtaaatgaagctgctttgttggctgggagatcaaataaagaaatagtggaaaaaattgacttcatctgtgcagtggagcgctctattgctggcattgagaaaaagcatgcaaagctgaagggtaatgaaaaggctgttgttgcacggcatgaagttggtcatgccgttgtgggaactgctgtagcaaacctattgccagggcagccacgtgtggagaaattgagtatattgccaaggtcaggtggtgcattgggctttacatacacccctcccacaacagaagatagatatttgctctttgttgatgaactgcgtggacgtctagtaacacttttgggtggaagggcagcagaggaagtagtactgtcagggcgtgtttctactggagcacttgatgacataaggcgtgccactgacatggcatacaaggctgtagcagagtatggtcttaatcagcgcataggtccgatatcggtggcaacattgtcaaatggtgggctagatgaatccggaggctctccatggggaagggatcagggccatctagttgaccttgtccagcgggaagtaaaagcccttcttcaatcagcccttgatgtcgctctttcagttgtccgtgctaatcctacagttttggaaggccttggagcatatttagaagagaatgaaaaggttgagggcgaggagcttcaagagtggctcaagtcggttgttgcaccaaaagaattgacctcatttataagaggaaagcaagagcaggttcttcagctggaagcaggctcctag</cdnaseq>|
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==Structured Information==
AA = <aaseq>MASASAAAETLAAASLPVASPSRSLLRPLPRRASAGGGCSASVR                    ISAVPPRGLGFAVVQRRVLRRPPAARANVEREGDGAEASGPGEASSSSSGDGDRDGAA                    AAAEAGGDGASTSTTSAAATPPQPPSSKRGENKWRRKLIKGGGVGRWLWEPIVQGREM                    GFLLLQLGFAIFALRMLRPEIALPGSEPRPQTTYVSVPYSDFLASIDKNQVKKVEVDG                    VHIMFRLRPEVEARAMEQPQVQRGTDSVADNAGVPRRIVFTTTRPVDIKTPYEKMVEN                    SVEFGSPDKRSGGLLNSALVALIYVVLIAVVLQRLPISFSQHSAGQLRNRKNSNSGGA                    KVSESTDIVTFADVAGVDEAKEELEEIVEFLRNPERYIRLGARPPRGVLLVGLPGTGK                    TLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFIDEIDAV                    AKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRF                    DRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAA                    LLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVAN                    LLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVV                    LSGRVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGSPWGRDQ                    GHLVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSV                    VAPKELTSFIRGKQEQVLQLEAGS</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
DNA = <dnaseqindica>197..1081#2197..2262#2356..2490#2601..2666#2748..2933#3009..3095#3217..3330#3406..3530#3607..3715#4530..4655#4743..5063#5378..5501#5637..5761#gccggcctcgcctcggcctctgccttcctcatctctccccctctctctctctctctctctccctcctcctcctcaccccgacccctccccgccgattcctccctcctccacgcgcgcgcggcgcggcgcagcgagcgctctccgattcttccggctccgagggattagggttccgggggggcacgcgtccgctgacatggcctccgcctccgccgccgccgaaaccctcgcggcggcgtcgctccccgtcgcgtcgccttcgcggtcgctgctgcggccgctccccaggagagcgtccgcgggaggcggctgctccgcgtccgtacgaatctccgccgtgccgccgcgggggctcgggttcgcggtcgtccagcgccgcgtcctccgccgcccgccggcggcgcgcgccaacgtcgagcgcgaaggggacggggccgaagcgtccgggccaggagaggcgtcgtcctcctcctctggagatggggaccgcgacggggcggcggcggcggcggaggcaggaggtgatggcgccagcacgagcaccacgagcgcggccgcgacgcctccgcagccgccctcatcgaagaggggggagaacaagtggcggcggaagctgattaagggcggaggcgttgggcggtggctttgggagcccatagttcaggggagggaaatggggttcctcctgctccagcttgggttcgccatattcgcgctccgaatgctgcggcccgagatcgcgctgcctggctcagagccccggccacagacaacgtacgtcagcgtcccatacagcgacttcctggcgagcatagacaagaaccaggtgaagaaggtcgaggtggacggggtgcacatcatgttcaggctccgtcctgaggttgaggcccgtgcaatggagcagccacaggtgcagcgtggaacagattctgttgctgataatgctggagttccaaggcgaattgtcttcacaacaacacgtccagtggacattaagacaccatatgaaaaaatggtggagaatagtgttgagtttgggtcgccggacaaaaggtctggtggcttgctcaattcggctttggtaaggcactacagctgaaaaataaatttgttatacgtgtggtatttttaggctggatatcttagtatagggaaagcaataatcacatcagaacatagatagggaagaatgcagtatagcatgtagaatgatggttattgtaggactggtgtggtgttgagttttgaaatggagagatcaattagttgcagtgacttatgcaaactagttattttgtggcttatagcactatatacagcatacttaccactggccagccatgaaggagaagaaaatgctgtgtgtttaactgtttactattagcatgaaggctcgagatatttgcaactgcgtgagagcatataattcatgttagtttcaacttatggaaaatcagaagcatcattgctcaatttgctaacagaagactcagaaatcacatattccatggtgtttggtgatagttgaaatgatgttttatagacatggtagttcagagttaaaagtttactatatttgtgccctggtcacagataagccgattattacaagaacataaattatagtcagttgcatatcacaaaaaatcctcgcatcaatatgccaaataaatcttcggatatgacctgaaataatggaattatctgaggattcatgtgggtatttctacatgcagttgtaatattacgcagtagattgagtttctaacctgacttcaaatgcaaattgaaagcacaacttttaacattaagactttaaaatcactagtacttttcttcgttattatcatattcccctcgtcccttcatccttgtgaactcttcattcatcaccactgttgtataccttgaatgagaaaacaggatggaatgatttatggattggttcacacgaaaaactgaacttccagttgaatgttggaacttacagatcaatgaattaatggggttttgttaaaacttagtatggcaaaatggaatcctaagtagaaaataggttacagagcataccatttatctgagacagcactgttttgctgtttcattttgttcctaacttcttctttattagaaatatacagctctctctcctagctgcgtttttttgtcctaaccatgcccttattttttttgcaggtggctcttatttatgttgtattaattgctgtagttctgcagcgattgccaataagcttttctcaggtactgatgaatgcacttcattacttcaatcaactaatgaacatactcggttatatctttaatagatataatatagtttcttgtgtatatcagcattcagcaggccagctgaggaatcggaagaattcaaactctggtggggccaaagtttcagaaagtaccgatatagttacatttgctgatgtggctggagtagatgaggccaaagaagagctggaagagattgtggtatgtgttttatgctcaatgttactggtatatgcagttatccactgatattatgccttatctgttgactcgaggggaataagctagttatatcttaatcttatgttcaggagttcctaaggaacccagaaagatatattcgtcttggtgcgcgacctccacgaggtgtcttgttggtcagttctgcagtcatttaagtaatgatgaatgttgctggactagagtttttgtactatgatgtaattcattatttacaggtgggccttccaggaactggaaagacgcttcttgcaaaagctgtcgcaggggaagctgaagtcccattcataagttgctctgcaagtgaatttgtggagttgtatgtaggcatgggagcagctcgagtgcgtgacctatttgctagagctaaaaaggaatctccttcgattatttttattgatgaggtaacctactgtttgaggacaaaaatctagttttatgtgcttaaatgtgtgataactaattgcatttctttgtagattgatgctgtggcaaaaagccgtgatggccgttatcgtatcgtcagtaatgatgagcgagagcagacactaaatcaattactcacggtattgatagtaaagagtcctttaatcttgtgattctgactatattttactcacatacacacatctttagttggggtccaattgaattatcttcgtgttaattttctctgaatctacctaggaaatggatggatttgacaccaactcagctgtcattgtacttggagcaacaaaccgagcagatgttttagatcctgccctccgacgccctgggagatttgaccgtgtagttatggtaaattgatcttctcaataaaaaaaagtgatactggatctctgttgtctgaggtcatagatatttatgtgataggttgaagctcccgacagatttggaagagaatctattctgaaagttcatgtgagcagaaaggagcttccgcttggtaaagatgtagatcttagtgacattgctgcaatgacaactggttttactgggtgagaattcttctgctcctttttaataagcatgcagcattttcagttgatttgacattctttttacactatacagggcagaccttgcaaatttagtaaatgaagctgctttgttggctgggagatcaaataaagaaatagtggaaaaaattgacttcatctgtgcagtggagcgctctattgctgtatgttcctttatctcaaattcgtttgctattattgtttgctaaggtcattttatacaaggaaatttcgtctgcttggtttcttatttctatcctagttttcttaaccgatttacaagaatatgtggaatggcaacttatacaagacaaatatctagatatccattttgaaactattcttgacttgtctctcccaattctgcttttgtagtataggtaataaagctgccagtgcattatgtccactaaatgcgttcggtttcttgcaatgaatttatgtctatttccacccttgctggtagtcaaattttttaaagtttttgaaataccgttcaacttgtgagttttttgatagattttggggccgtttggtagggctccaactcctaaatttaattccaagagttgggtctgaagtggatttgtggagctgcctaaacccagcttcacctctctagttcattttgtgagagcactccagccagctccactccattcattggtggagctgaaactgtttggttgggctccagctctaggagcggtggagtttgagctagagatatgccaaacaggccctttatggattttctttatttgataatggggacgccataaggtcatatatgatgttactgtcctcattcttttcctacatgctgtccattgattcagcactgaaggaatggcccttttgttgatccttgccctagttcaatattgttatggaagatgtatctgttccagctgttagagtagacattgttttacttccacattgtttcctggaaactaactggaattattttcttagggcattgagaaaaagcatgcaaagctgaagggtaatgaaaaggctgttgttgcacggcatgaagttggtcatgccgttgtgggaactgctgtagcaaacctattgccagggcagccacgtgtggaggtttgaacgcaagcaactatcgatagaacagtttaagaaaatgttcgtcttgggcttacattttagtgttgttcttttttccaccagaaattgagtatattgccaaggtcaggtggtgcattgggctttacatacacccctcccacaacagaagatagatatttgctctttgttgatgaactgcgtggacgtctagtaacacttttgggtggaagggcagcagaggaagtagtactgtcagggcgtgtttctactggagcacttgatgacataaggcgtgccactgacatggcatacaaggctgtagcagagtatggtcttaatcagcgcataggtccgatatcggtggcaacattgtcaaatggtgggctagatgaatccggaggctctccatggggaagggatcaggtctgtctcaaaatgtccctactcctttacttgaattttttatttggaatttggacattttcgcgggtacttttttttttaactttttagaaagtcaagttcttttttagaaagattacccgtctttgtccttgcctacgaatcagtccacattttgaacaaattttacgaacagaagctctttttttcatgtttccgtattcctttattaaactatgaatttactcttttggaaaaaaaaaagtctctttgcctgacaaatgcgtaagctaccatctgcatgtattgtgctcacactgcaaaactaatgacagggccatctagttgaccttgtccagcgggaagtaaaagcccttcttcaatcagcccttgatgtcgctctttcagttgtccgtgctaatcctacagttttggaaggccttggagcatatttagaaggtaaaaaactagaccaaattatcaggttgcatatgttattgtggctctcctttctatgatgggttttgcttcattagattaaaaatgaaaactgtttaacctatgcataacggctttcttctctaccccattcagagaatgaaaaggttgagggcgaggagcttcaagagtggctcaagtcggttgttgcaccaaaagaattgacctcatttataagaggaaagcaagagcaggttcttcagctggaagcaggctcctagcactatacattggtctcgtagaatcaattaattaatttaacacaagtagctccaacagtttaaactgtacaagttctgaggtacgcaactcacgcccaagccaagacccttgtgatgctgtatatatctatgtgccgctccacgacccttgactacaggtctaccaggaatgattcatagcgagttgtaaaccccggagtattgtaagttccttcggtttcctcgtttgccgttggatgttgtttatagattaggcgggtggtacacatgtaaaagaatattcgtttttcttctgtgttctttctctttctgttcatcctgcggaaggaattttttgttacattgtcatcttggcaaatattaataggaataattcatatacgtcgttgatcct</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054119.1 RefSeq:Os02g0649700]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 2]]
 
[[Category:Chromosome 2]]
 

Latest revision as of 06:44, 14 May 2015

This gene encodes ATP-dependent zinc metalloprotease FTSH 7, chloroplastic, homologue of AtFtsH7. It is a predicted gene base on homology comparison.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information