|
|
| (5 intermediate revisions by 3 users not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | The rice '''''Os02g0664000''''' was reported as '''''OsGPX3''''' in 2013 <ref name="ref1" /> by researchers from Brazil. |
| − | GeneName = Os02g0664000|
| |
| − | Description = Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx)|
| |
| − | Version = NM_001054194.1 GI:115447758 GeneID:4330235|
| |
| − | Length = 2634 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os02g0664000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | [[File:124-Os02g0664000.png|right|thumb|427px|'''Figure 1.''' ''Glutathione peroxidase proteins (OsGPX1, OsGPX2, OsGPX3, OsGPX4 and OsGPX5) are localized in mitochondria, chloroplasts and cytosol.<ref name="ref1" />.'']] |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | ===Gene Symbol=== |
| − | |
| + | *'''''Os02g0664000''''' '''''<=>''''' '''''OsGPX3,GPX3''''' |
| − | Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
| + | ===Function=== |
| − | AP = Chromosome 2:27816631..27819264|
| + | * The OsGPX gene family is induced in response to exogenous H2O2 and cold stress. |
| − | CDS = 27816631..27816888,27817199..27817275,27817965..27818026,27818165..27818283,27818694..27818861<br>,27818955..27818987|
| + | * Silencing the mitochondrial '''''OsGPX3''''' gene impairs normal plant development and leads to a stress-induced morphogenic response via H2O2 accumulation |
| − | GCID = <gbrowseImage1>
| + | * Post-transcriptional knockdown of '''''OsGPX3''''' affects root and shoot growth |
| − | name=NC_008395:27816631..27819264
| + | |
| − | source=RiceChromosome02
| + | ===Expression=== |
| − | preset=GeneLocation
| + | * '''''GPX''''' gene expression is mainly regulated by exogenous H2O2 |
| − | </gbrowseImage1>|
| + | |
| − | GSID = <gbrowseImage2>
| + | ===Subcellular localization=== |
| − | name=NC_008395:27816631..27819264
| + | * Subcellular localization analysis showed that GPX proteins are mainly localized in plant cell organelles |
| − | source=RiceChromosome02
| + | |
| − | preset=GeneLocation
| + | You can also add sub-section(s) at will. |
| − | </gbrowseImage2>| | + | |
| − | CDNA = <cdnaseq>atgccgtctcgcaccgccccgttcatctctcgcctccggctcctccgaaccgccgccgccctctccccgttctcgtcctccgcgccgccgcggcacagcccccgcatcctccgcgctatccctgtcggtgcgcctcacccgccgcgcgtctccgcagccgtctcgccgctggtccgtccggtcgccgccgggttcgcgctgttcagcatggccaccgccgcctcctccgccgcatccgtccacgacttcaccgtcaaggatgcaagtggcaaagatgtggacctgagcaccttcaaggggaaagtcctccttatcgtcaatgttgcatctcagtgtggcttgaccaattccaactacacggagctgagccagttgtatgagaagtacaaggaccagggttttgagatccttgctttcccatgcaaccagtttggtggacaggaacctggcactaatgaggagattgtccaatttgcttgcacccgcttcaaggccgagtatccaatttttgataaggttgatgttaatggtgacaacactgcacccatctacaagtttctgaagtccagcaaaggtggtcttttcggtgacaatatcaaatggaacttctccaagttcttggtcgacaaagaggggcgtgttgtggagcgctatgcgccaactacttctccactcagcatggagaaggacatcaagaagctgcttggaagttcttaa</cdnaseq>|
| + | ==Labs working on this gene== |
| − | AA = <aaseq>MPSRTAPFISRLRLLRTAAALSPFSSSAPPRHSPRILRAIPVGA PHPPRVSAAVSPLVRPVAAGFALFSMATAASSAASVHDFTVKDASGKDVDLSTFKGKV LLIVNVASQCGLTNSNYTELSQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFAC TRFKAEYPIFDKVDVNGDNTAPIYKFLKSSKGGLFGDNIKWNFSKFLVDKEGRVVERY APTTSPLSMEKDIKKLLGSS</aaseq>|
| + | * Department of Genetics, Federal University of Rio Grande do Sul, RS, Brazil |
| − | DNA = <dnaseqindica>1..258#569..645#1335..1396#1535..1653#2064..2231#2325..2357#atgccgtctcgcaccgccccgttcatctctcgcctccggctcctccgaaccgccgccgccctctccccgttctcgtcctccgcgccgccgcggcacagcccccgcatcctccgcgctatccctgtcggtgcgcctcacccgccgcgcgtctccgcagccgtctcgccgctggtccgtccggtcgccgccgggttcgcgctgttcagcatggccaccgccgcctcctccgccgcatccgtccacgacttcaccgtcaaggtctgcactgcctcctgccctcctcaaaacttggacacccctttcccctctggtgatttggtcccctttcagcagcgagagactgaagctttatacccataccccatacccctctgggggaaagtatttgcacatcgatgcctccgtgatgctgctacgattcggcccttttgggacttcttaagccaatatctttttggttttagctgcagatttttttacccaaatctttggaggttttctacaagctgttatactgcttgaattgtgatcctaatgtttaaaggactatgctttttggtgtttgcaggatgcaagtggcaaagatgtggacctgagcaccttcaaggggaaagtcctccttatcgtcaatgttgcatctcagtggtaccaattattaccaatccctcacctccacagtgtctacgttttaattttgtaaacttggaaattattctagaatgcataatgtgatttatctttttcatgttgaaatgttccatgaacaacgaaaccttggaaccctagtactgcgttatcaagcgcttaagttgaatgatatgctcatttgatgcctaatataatgtatattttcgatcaaacttccattcatgttgcaaagtaaagatgccgaatttatatggtttcatatggaacacattcgagtttctatctaggccatatgagacaaatcgaaatttgaagtattgttctgctaaatgaaactttaaaaagagccatggtagtgtttgtcccggaggatcagcctttgcatgtagattatcgatatatggaaaaaataataatctggtcagcaggtaagttggttttagctggacaacaggatgttgatctcttgccaattggaaagtttgtgcagattgtcataccattaactatttttctatttgcgtctcatcctccttgtgttaagggatacatgttctttagaggacggccattttttttttactaattttaaagaccaatgagatgcagatataataaaataacatacaaactgatatcattatcctcaaattaagaaatcttgttgctctctgtcattgttgcagtggcttgaccaattccaactacacggagctgagccagttgtatgagaagtacaaggaccagggtgagtgttagatgcatctcatcatttgttccctcattatgaaatctctcttgtgcgctgaattgctcatatgttctttcatttggagtttatgaccaaccaattgctaatgtcattgtcaatttgatttgacgacaggttttgagatccttgctttcccatgcaaccagtttggtggacaggaacctggcactaatgaggagattgtccaatttgcttgcacccgcttcaaggccgagtatccaatttttgataaggtaaatttgggcacattataccactacctcttgcatttttgcactttttttttcatttatctttcaagcggaaagaaacaactaactcaagtatatgttcaccttccagagccgtcataatattttaaaggaaattaatcccattccgaaagtgttccctttcatatgtagcctgtgatgtatttccagatacttgtctagtacttaaaaggaaattgatcaagtccatgaagtttttatccgattcttatgcatttcgtatgatgtatgcgatcgataagcctgataccagttttatcctttcatttatcacaagaaagaatcatggatgtttataatgtgatgatcaattgatttttattgtttagagaggtgagatctagaagttctaactaccattatcttaataggttgatgttaatggtgacaacactgcacccatctacaagtttctgaagtccagcaaaggtggtcttttcggtgacaatatcaaatggaacttctccaagttcttggtcgacaaagaggggcgtgttgtggagcgctatgcgccaactacttctccactcagcatggaggtaaatcccgagctccaagtgggtgtaatttgagttccatctcatcaagcttccttgccttcacttacagcgattgctttaatcatattacagaaggacatcaagaagctgcttggaagttcttaaaaccttaccgccggcgccaccagatgcactgctgcgttgcattgagcacttggaacttccaataatgttgtaataaaactgtgcttggaattgctgtattttcatttgcgtagccctgctgtgtaatgtataaagtattaacgtgtaatgaaattggcttactgcatcactttgcccctttattgaaatattatctcctgtatctgtgttcgttattgagacctgcgactgcgatgagcaagttttgacgtgtaacgtgtactcgttctatctgtgc</dnaseqindica>|
| + | * Biotechnology Center, Federal University of Rio Grande do Sul, RS, Brazil |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054194.1 RefSeq:Os02g0664000]|
| + | * Department of Botany, Federal University of Rio Grande do Sul, RS , Brazil |
| − | }}
| + | ==References== |
| − | [[Category:Genes]] | + | <references> |
| − | [[Category:Japonica mRNA]]
| + | * <ref name="ref1"> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | The mitochondrial glutathione peroxidase GPX3 is essential for H 2 O 2 |
| − | [[Category:Japonica Genes]]
| + | homeostasis and root and shoot development in rice |
| − | [[Category:Japonica Chromosome 2]] | + | </ref> |
| − | [[Category:Chromosome 2]]
| + | </references> |
| | + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]] |
