Difference between revisions of "Os02g0671100"

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(Created page with "{{JaponicaGene| GeneName = Os02g0671100| Description = Protein of unknown function DUF295 family protein| Version = NM_001054233.1 GI:115447836 GeneID:4330275| Length = 26...")
 
(→‎References)
 
(4 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice '''''Os02g0671100''''' was reported as '''''MAIF1''''' in 2011 <ref name="ref1" /> by researchers from China.  
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GeneName = Os02g0671100|
 
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Description = Protein of unknown function DUF295 family protein|
 
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Version = NM_001054233.1 GI:115447836 GeneID:4330275|
 
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Length = 2620 bp|
 
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Definition = Oryza sativa Japonica Group Os02g0671100, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os02g0671100''''' '''''<=>''''' '''''MAIF1, OsFbox104,OsMAIF1'''''
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Function===
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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* The rice '''''MAIF1''''' encodes a protein with a F-box domain.
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AP = Chromosome 2:28135712..28138331|
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* Growth restraint in plants is an acclimatization strategy against abiotic stress.
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CDS = 28135729..28136862|
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* '''''MAIF1''''' is involved in multiple signaling pathways in regulating root growth.
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GCID = <gbrowseImage1>
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* '''''MAIF1''''' plays the negative role in response to abiotic stress possibly by regulating root growth.
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name=NC_008395:28135712..28138331
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===Expression===
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source=RiceChromosome02
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* MAIF1 expression is induced rapidly and strongly by abscisic acid (ABA) and abiotic stresses.  
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preset=GeneLocation
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* MAIF1 expression is also induced in root tips by sucrose, independent of its hy-drolytic hexose products, glucose and fructose, and the plant hormones auxin and cytokinin.
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</gbrowseImage1>|
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===Phenotypic analysis===
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GSID = <gbrowseImage2>
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* Overexpression of '''''MAIF1''''' reduces rice ABA sensitivity and abiotic stress tolerance and promotes rice root growth.
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name=NC_008395:28135712..28138331
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===Subcellular localization===
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source=RiceChromosome02
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* The '''''MAIF1''''' protein is mainly localized in the plasma membrane and nucleus.
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preset=GeneLocation
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</gbrowseImage2>|
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You can also add sub-section(s) at will.
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CDNA = <cdnaseq>atgggggagccgccggggaagaccgggcgacgtgacgcgggcgggacggcgccggcggtggaagaccggtggacgcagctcccgccggagctcctcccgctcatctgcaagaagctgccggactcggccgacttcgtgcgcttccggacggtatgcagcgcgtggcgcgacgccgccccgttgtccgacgtcccgccgcagctgccgtgggtcgtcgagcgccgcgggtccgcgttccaggcgagggcccatttccgcttctactcgcctagctccgggaggacgtacggcgtccgtggctacggcggccgctcctggctcgtcatgggcggcgcgtgccaggagcacctcgtcaccaccgtggacctctccacgacggcgctgtacaacccgctcaccggggagcgcctcgcgctgccccccgcgccgtacccgcagtggcgccacggcgtcgtccacgtcgtggccgccggccgccgccgcggcggcgctcccctggtggtgaacgcatccacgaggacggggcacttcgggtactgccgccagggggataccaagtggaccctggtcgacgggcgccaggacatgggccaccgcgcgtaccacggcgggcggttctacgtcaacacaaacgcgcaggagacgctggtgatcgacgcctccaccggcgccgtcgagtccgtcctgccgccgccgccacgctcggccgacgccggtgccggcgtctcctgcggggactacctggtggagtcgcgcgggaagctgatcagggccgtgctgttcccgcgcgacggcgtggtgaccacgtcggccgaggactactacctcaacgtgtatcagctgcaggaggacgggaaggccgccgccgcgtgggccaaggtggagagcgtcggggatagcgtgctctttttcgacaagcacgggcacgggttctcgctggagcccaacggcgccgcggagctgaagcgggattgcgtctacttcatgcacgagaagcggacatggctggacgccggggagtacaggttcctttgtcggtataacatggagaccggagaggtcgatagagttgtgtcgctgcccgacacgttcggggacacctgggttgtccccggattgtgcccctctgaataa</cdnaseq>|
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AA = <aaseq>MGEPPGKTGRRDAGGTAPAVEDRWTQLPPELLPLICKKLPDSAD                    FVRFRTVCSAWRDAAPLSDVPPQLPWVVERRGSAFQARAHFRFYSPSSGRTYGVRGYG                    GRSWLVMGGACQEHLVTTVDLSTTALYNPLTGERLALPPAPYPQWRHGVVHVVAAGRR                    RGGAPLVVNASTRTGHFGYCRQGDTKWTLVDGRQDMGHRAYHGGRFYVNTNAQETLVI                    DASTGAVESVLPPPPRSADAGAGVSCGDYLVESRGKLIRAVLFPRDGVVTTSAEDYYL                    NVYQLQEDGKAAAAWAKVESVGDSVLFFDKHGHGFSLEPNGAAELKRDCVYFMHEKRT                    WLDAGEYRFLCRYNMETGEVDRVVSLPDTFGDTWVVPGLCPSE</aaseq>|
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==Labs working on this gene==
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DNA = <dnaseqindica>18..1151#aactaaaacctcgtggaatgggggagccgccggggaagaccgggcgacgtgacgcgggcgggacggcgccggcggtggaagaccggtggacgcagctcccgccggagctcctcccgctcatctgcaagaagctgccggactcggccgacttcgtgcgcttccggacggtatgcagcgcgtggcgcgacgccgccccgttgtccgacgtcccgccgcagctgccgtgggtcgtcgagcgccgcgggtccgcgttccaggcgagggcccatttccgcttctactcgcctagctccgggaggacgtacggcgtccgtggctacggcggccgctcctggctcgtcatgggcggcgcgtgccaggagcacctcgtcaccaccgtggacctctccacgacggcgctgtacaacccgctcaccggggagcgcctcgcgctgccccccgcgccgtacccgcagtggcgccacggcgtcgtccacgtcgtggccgccggccgccgccgcggcggcgctcccctggtggtgaacgcatccacgaggacggggcacttcgggtactgccgccagggggataccaagtggaccctggtcgacgggcgccaggacatgggccaccgcgcgtaccacggcgggcggttctacgtcaacacaaacgcgcaggagacgctggtgatcgacgcctccaccggcgccgtcgagtccgtcctgccgccgccgccacgctcggccgacgccggtgccggcgtctcctgcggggactacctggtggagtcgcgcgggaagctgatcagggccgtgctgttcccgcgcgacggcgtggtgaccacgtcggccgaggactactacctcaacgtgtatcagctgcaggaggacgggaaggccgccgccgcgtgggccaaggtggagagcgtcggggatagcgtgctctttttcgacaagcacgggcacgggttctcgctggagcccaacggcgccgcggagctgaagcgggattgcgtctacttcatgcacgagaagcggacatggctggacgccggggagtacaggttcctttgtcggtataacatggagaccggagaggtcgatagagttgtgtcgctgcccgacacgttcggggacacctgggttgtccccggattgtgcccctctgaataagatgtgtcccggcgatgttgttggtttttcggtgtttcttgtagttttttctccttgaattttcattgaaaaattaaatagatgcatttagttgctctgggtgaatgattggtctttgaaaaatgagagaggtcttgggttgtgtgtgtcacacaatcacatgcattttccattatgtttaataaaatttaatttgtgtgtctaactttttgtggctttaacatatttttattggtctgataaaaaaaatgatgtttgcaaatagtggtggtcgtggtataaaaaacaacttttttatggtgcacatttttaccaaacaaattatagctcgtgtacttaccatgttttatctgtgagctagttgagaaaatataatttgtgtcatgcttttaaagatatttcacttcacacacatgaatctgtcaaaagtgctagtgttgttagtgtgacaacttacctatcagttcattactccctctgtttcacaatgtaaatcattttagcatttcccacattcatattgatgttaatgaatctagacatatatatccatctagattcattaacatcaatatgaatatgaaaaatgctagaatgacttacattgtaaaaccgaggaagtaataagctaatcccaagaaagcaaataactttcgtgtatattcgatcggttcatattatacttaggctcatacaatgtatcgaccaattatattgttggtgttgtagtagaaatatgtttctgtcagtttcactttgcttgtgttgttcgtggtatcaacctagctattttgtgttggtattatagcaaaaatatgtttttaccaattttgctttacatgtgttgtttctttgtactgaacccacgtgccaatgcattctactagaatgtgatgaagaaatttcaatatcatgaataggtttctctcacaatacatcaatgtgtactaactagaggaacacaggaaggccaccacggtgtgggccaaggtggggagcattgaggaccgcgtgctattcctagacaagtaggggcatgggttctcgctagagcccaacggcgcgtcgggactaaggcaggattgcgtctactttatgcatggacgtggctggattccgaggagtacaagttcctttatcggtatagcatggaggacagaaaggttgatagagttgtgtcgctagtccacacgtttagggacacctgggttgtccctagattgtgtccctccaaataagatgcgtcccgacagcgtcgttggtttttgcggtgctccttgtagttttttctccttgaatttccattcaaaaattaggaggatgtgcttagttgctccgggtgaatgattgtcctaacaaacatggataaattttgggttttgtgtgtcacacaacaataagcatcaaattacatgtatttcccattgtgttgaataaaatttgatttgtgtgtctttttttgcagtatt</dnaseqindica>|
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* State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054233.1 RefSeq:Os02g0671100]|
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* National Plant Gene Research Center, Beijing 100101, China
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}}
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* Graduate School of the Chinese Academy of Sciences, Beijing 100039, China
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[[Category:Genes]]
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* Present address: School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China
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[[Category:Japonica mRNA]]
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* State Key Laboratory of Rice Biology, National Rice Research Institute, Hangzhou 310006, China
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[[Category:Oryza Sativa Japonica Group]]
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==References==
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[[Category:Japonica Genes]]
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<references>
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[[Category:Japonica Chromosome 2]]
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* <ref name="ref1">
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[[Category:Chromosome 2]]
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Yan YS, Chen XY, Yang K, Sun ZX, Fu YP, Zhang YM, Fang RX. Overexpression of
 +
an F-box protein gene reduces abiotic stress tolerance and promotes root growth
 +
in rice. Mol Plant. 2011 Jan;4(1):190-7. doi: 10.1093/mp/ssq066. PubMed PMID:
 +
21059694.
 +
</ref>
 +
 
 +
</references>
 +
 
 +
==Structured Information==
 +
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

Latest revision as of 01:17, 24 February 2017

The rice Os02g0671100 was reported as MAIF1 in 2011 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os02g0671100 <=> MAIF1, OsFbox104,OsMAIF1

Function

  • The rice MAIF1 encodes a protein with a F-box domain.
  • Growth restraint in plants is an acclimatization strategy against abiotic stress.
  • MAIF1 is involved in multiple signaling pathways in regulating root growth.
  • MAIF1 plays the negative role in response to abiotic stress possibly by regulating root growth.

Expression

  • MAIF1 expression is induced rapidly and strongly by abscisic acid (ABA) and abiotic stresses.
  • MAIF1 expression is also induced in root tips by sucrose, independent of its hy-drolytic hexose products, glucose and fructose, and the plant hormones auxin and cytokinin.

Phenotypic analysis

  • Overexpression of MAIF1 reduces rice ABA sensitivity and abiotic stress tolerance and promotes rice root growth.

Subcellular localization

  • The MAIF1 protein is mainly localized in the plasma membrane and nucleus.

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China
  • National Plant Gene Research Center, Beijing 100101, China
  • Graduate School of the Chinese Academy of Sciences, Beijing 100039, China
  • Present address: School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China
  • State Key Laboratory of Rice Biology, National Rice Research Institute, Hangzhou 310006, China

References

  1. ↑ Yan YS, Chen XY, Yang K, Sun ZX, Fu YP, Zhang YM, Fang RX. Overexpression of an F-box protein gene reduces abiotic stress tolerance and promotes root growth in rice. Mol Plant. 2011 Jan;4(1):190-7. doi: 10.1093/mp/ssq066. PubMed PMID: 21059694.

Structured Information