Difference between revisions of "Os02g0762400"

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(Created page with "{{JaponicaGene| GeneName = Os02g0762400| Description = Cyclin-dependent kinase inhibitor family protein| Version = NM_001054739.1 GI:115448848 GeneID:4330816| Length = 163...")
 
(→‎Gene Symbol)
 
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{{JaponicaGene|
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The rice '''''Os02g0762400''''' was reported as '''''KRP1''''' in 2006 <ref name="ref1" /> by researchers from Belgium.  
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GeneName = Os02g0762400|
 
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Description = Cyclin-dependent kinase inhibitor family protein|
 
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Version = NM_001054739.1 GI:115448848 GeneID:4330816|
 
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Length = 1638 bp|
 
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Definition = Oryza sativa Japonica Group Os02g0762400, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os02g0762400''''' '''''<=>''''' '''''KRP1,OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI'''''
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Function===
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
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* Kip-related proteins ('''''KRPs''''') play a major role in the regulation of the plant cell cycle.
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AP = Chromosome 2:32998172..32999809|
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* '''''KRP1''''' plays an important role in the exit from the mitotic cell cycle during rice grain
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CDS = 32998231..32998662,32998763..32998827,32998933..32999142,32999311..32999392|
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formation.
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GCID = <gbrowseImage1>
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===Phenotypic analysis===
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name=NC_008395:32998172..32999809
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* Phenotypic analysis revealed that overexpressed '''''KRP1''''' reduced cell production during leaf development.
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source=RiceChromosome02
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* The reduced cell production in the leaf meristem was partly compensated by an increased cell size, demonstrating the existence of a compensatory mechanism in monocot species by which growth rate is less reduced than cell production, through cell expansion.
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preset=GeneLocation
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* Furthermore, '''''KRP1''''' overexpression dramatically reduced seed filling. Sectioning through the overex-pressed KRP1 seeds showed that KRP overproduction disturbed the production of endosperm cells. The decrease in the number of fully formed seeds was accompanied by a drop in the endoreduplication of endosperm cells, pointing toward a role of '''''KRP1''''' in connecting endocycle with endosperm development.
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</gbrowseImage1>|
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GSID = <gbrowseImage2>
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You can also add sub-section(s) at will.
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name=NC_008395:32998172..32999809
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source=RiceChromosome02
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==Labs working on this gene==
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preset=GeneLocation
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* Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University,B–9052 Ghent, Belgium (R.M.B., L.D.V., L.S.L.N., V.M., G.T.S.B., D.I.); and CropDesign NV, B–9052 Ghent, Belgium (A.P., A.-M.D., J.D.W., R.P., W.F.B., V.F.)
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</gbrowseImage2>|
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==References==
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CDNA = <cdnaseq>atgggcaagtacatgaggaagttcaggggggccacgggggaggagttggccgccatggaggtcacgcaggtggttggcgtccggacgaggtcgaggtcggcagcggcggcgggcgcgacgacgacgaaggtgaaggcggcgtcggcggcgtccaccaggaggaggaaggcgctgctgccgacggcggtcgtggggactactcgccgtgacggcgggagctgctacctccagctgaggagccgcatgctgttcatggccccgccgaggccggcgccggccgcgagggctccggttgtagcggaggcggcgggttccgggaacggagcggcggcgcatgcggcggctggcctctcgcgttgctccagcacggcgtcgtccgtggacgcggcggctcaggacaggagcctcgcgtgccgctccgacgtcgcggaggcaggcagcgagcatgtcccggagggctccgcgagcgactcggcgagcggccgtgaccgcgagaggagagaaacaactccatcaagctttctccccggagaggtgagcgatctggagtcggatctggctggaggacagaagcgcagccgtccactaccttctgcggcaacagcctcagcacagcaagccacgcggccgaagattccgccggccgccgagatcgaggcgttcttcgcggcggccgaggaggctgaggccaagcgcttcgccgccaagtacaacttcgacgtcgttcgcggcgtgcccctcgacgccggtcggttcgagtggactccggtggtcagcagccgaagctga</cdnaseq>|
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<references>
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AA = <aaseq>MGKYMRKFRGATGEELAAMEVTQVVGVRTRSRSAAAAGATTTKV                    KAASAASTRRRKALLPTAVVGTTRRDGGSCYLQLRSRMLFMAPPRPAPAARAPVVAEA                    AGSGNGAAAHAAAGLSRCSSTASSVDAAAQDRSLACRSDVAEAGSEHVPEGSASDSAS                    GRDRERRETTPSSFLPGEVSDLESDLAGGQKRSRPLPSAATASAQQATRPKIPPAAEI                    EAFFAAAEEAEAKRFAAKYNFDVVRGVPLDAGRFEWTPVVSSRS</aaseq>|
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* <ref name="ref1">
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DNA = <dnaseqindica>60..491#592..656#762..971#1140..1221#agggaaacggccaaagaaggcgacggcggcggcgcaggaggggcgcgcacgcggcgcagatgggcaagtacatgaggaagttcaggggggccacgggggaggagttggccgccatggaggtcacgcaggtggttggcgtccggacgaggtcgaggtcggcagcggcggcgggcgcgacgacgacgaaggtgaaggcggcgtcggcggcgtccaccaggaggaggaaggcgctgctgccgacggcggtcgtggggactactcgccgtgacggcgggagctgctacctccagctgaggagccgcatgctgttcatggccccgccgaggccggcgccggccgcgagggctccggttgtagcggaggcggcgggttccgggaacggagcggcggcgcatgcggcggctggcctctcgcgttgctccagcacggcgtcgtccgtggacgcggcggctcaggacaggagcctcgcgtgccgctccgacgtcgcggaggtgagggaatcgaaaccctagaattcgaattcgaaaaatgatcccagatctctaatcaccggttgctgaagcgtgcgtgctttttggtgatgttctacaggcaggcagcgagcatgtcccggagggctccgcgagcgactcggcgagcggccgtgaccgcgagaggtgggagaattctccctcatttccggcaaattcttctgaattatgcgttctgacatgcccctgacgccgaatcaccctcgatttttcaaaattttcaaattccaggagagaaacaactccatcaagctttctccccggagaggtgagcgatctggagtcggatctggctggaggacagaagcgcagccgtccactaccttctgcggcaacagcctcagcacagcaagccacgcggccgaagattccgccggccgccgagatcgaggcgttcttcgcggcggccgaggaggctgaggccaagcgcttcgccgccaagtaagtatatacagaatttttaccgctcgctgtaacatctagtaaaagttactgcgcgccctagctagcttcgttcttcttctccgatgctcgcgcgtggcgtgaatttgccgctgctgccggcgagcaagataattaacgtgcgtgcgcttcttcccatggccgcaggtacaacttcgacgtcgttcgcggcgtgcccctcgacgccggtcggttcgagtggactccggtggtcagcagccgaagctgaagcgagcgtgcagattaagcggaagctagaaaggaaggtacaggggggcgccgtgtagaaagggaaggcgagctagagagaggagaagaagaagaagaaaagatgctcatccaaagggaataaactggaaaagtgggagactacaaaaaaagaagcattatagcctaacaaccaccgattcgactcttttttctttcacattttctttgcatttttactcttactgtgtactagaaagtagtagcagtagtaaactagtaattcgtcccagtatttatcagaggtttatctcgataggaatagatatattatccccttactgtaattgcctccatcttgtatttggatggaaattaaatttactgtacagcagcagcagctgttctgcaagtttaagttaaccatcaccgttttatt</dnaseqindica>|
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Barrôco RM, Peres A, Droual AM, De Veylder L, Nguyen le SL, De Wolf J, Mironov
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001054739.1 RefSeq:Os02g0762400]|
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V, Peerbolte R, Beemster GT, Inzé D, Broekaert WF, Frankard V. The
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}}
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cyclin-dependent kinase inhibitor Orysa;KRP1 plays an important role in seed
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[[Category:Genes]]
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development of rice. Plant Physiol. 2006 Nov;142(3):1053-64. PubMed PMID:
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[[Category:Japonica mRNA]]
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17012406; PubMed Central PMCID: PMC1630760.
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[[Category:Oryza Sativa Japonica Group]]
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</ref>
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[[Category:Japonica Genes]]
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[[Category:Japonica Chromosome 2]]
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</references>
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[[Category:Chromosome 2]]
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==Structured Information==
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]

Latest revision as of 02:19, 24 February 2017

The rice Os02g0762400 was reported as KRP1 in 2006 [1] by researchers from Belgium.

Annotated Information

Gene Symbol

  • Os02g0762400 <=> KRP1,OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI

Function

  • Kip-related proteins (KRPs) play a major role in the regulation of the plant cell cycle.
  • KRP1 plays an important role in the exit from the mitotic cell cycle during rice grain

formation.

Phenotypic analysis

  • Phenotypic analysis revealed that overexpressed KRP1 reduced cell production during leaf development.
  • The reduced cell production in the leaf meristem was partly compensated by an increased cell size, demonstrating the existence of a compensatory mechanism in monocot species by which growth rate is less reduced than cell production, through cell expansion.
  • Furthermore, KRP1 overexpression dramatically reduced seed filling. Sectioning through the overex-pressed KRP1 seeds showed that KRP overproduction disturbed the production of endosperm cells. The decrease in the number of fully formed seeds was accompanied by a drop in the endoreduplication of endosperm cells, pointing toward a role of KRP1 in connecting endocycle with endosperm development.

You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology, Ghent University,B–9052 Ghent, Belgium (R.M.B., L.D.V., L.S.L.N., V.M., G.T.S.B., D.I.); and CropDesign NV, B–9052 Ghent, Belgium (A.P., A.-M.D., J.D.W., R.P., W.F.B., V.F.)

References

  1. ↑ Barrôco RM, Peres A, Droual AM, De Veylder L, Nguyen le SL, De Wolf J, Mironov V, Peerbolte R, Beemster GT, Inzé D, Broekaert WF, Frankard V. The cyclin-dependent kinase inhibitor Orysa;KRP1 plays an important role in seed development of rice. Plant Physiol. 2006 Nov;142(3):1053-64. PubMed PMID: 17012406; PubMed Central PMCID: PMC1630760.

Structured Information