Difference between revisions of "Os01g0259400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0259400| Description = Protein kinase-like domain containing protein| Version = NM_001049174.1 GI:115435761 GeneID:4326239| Length = 7800 b...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os01g0259400|
 
−
Description = Protein kinase-like domain containing protein|
 
−
Version = NM_001049174.1 GI:115435761 GeneID:4326239|
 
−
Length = 7800 bp|
 
−
Definition = Oryza sativa Japonica Group Os01g0259400, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
+
Please input expression information here.
−
AP = Chromosome 1:8690809..8698608|
+
 
−
CDS = 8691292..8692410,8692620..8693489,8694502..8696085,8696179..8696238,8696316..8696394<br>,8696474..8696535,8697109..8697184,8697347..8697399,8698161..8698250<br>,8698391..8698438|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008394:8690809..8698608
+
 
−
source=RiceChromosome01
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008394:8690809..8698608
+
 
−
source=RiceChromosome01
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atgaacaacttccacgtctacgaggccatcggccgcggcaagcactcgacggtgtacaaggggcggaagaagaagagcatcgagtacttcgccgtcaagagcgtcgacaagtcgcagcggtccaaggtcctcaatgaggtccgaatgcttcattccttagatcatccgaatgttctgaaattttactcatggtacgaaacctcagctcatttttggttaatactggagtactgcgttggtggagacctaaagggcttgcttgagcaggataagaagctgcctgaaaattctatacatgacttggcttatgatcttgtgaaagctcttcagttcttgcattcacaaggaattatatattgtgatctgaaaccatcaaatgttttacttgatgaatctgggtgcatgaagctgtgcgattttggattagcaaggcgtttgaaagacatagagaagaccaatcctggagatgtgccgcaacctttgaaggggactccatgttatatggctcctgagttgttccaagagggaggagtgcattcatatgcttcagatttctgggcacttggttgtgtattgtatgaatgctattcaggaaggcccccttttgtggctaatgaatttacccagctagtcaaatctataatttcagatcctacaccacctttgcctgataacccctcaagatcctttcaaaatctgatcaattgcttactcatgaaagatcctgctgaaagattacagtggtctgaactatgcgagcatcacttttggaggagcagaatgtcaattattcctttacctcctcagcctgcctttgacaacatggtcgacctttctgctacaccatatttagttgagagaaatggtgataaaccttctagacagtccacaccacccaagccccgtgatggcctacggaagaaggacgaaaattctgctaaggtgttcacccctgttaagaatatgctaagtggtaagaaaaacaatgcaaaaccttcctgtaaggctgatggattgaagggtgtaaatatcctcaggatgtctcgtgtagctaagaggaatttgcagagagaaaaagacaaggagaactacaggcgacaccctacagaagcttctgagaatgatacagaagttaagattgaaaacaatgatatggaacttgattttggtgaaaatccagaaggtgatgcacctgatgacaatgatggatcagacaatcctggatccgcagaagatgaaaaactttccactcaaggcactgatggtaatgaagagaactgcatgagtaatcagatggatatgctcacagatgaaggcccagttaaggctgaaaccatgataaaaactgaacataattgttcagaaaatcttgatgtggtggccactccaccaagtatttgtatgaggaaagcacaacgagcaaagacaacttcaggtgccgcagctggttccgagccatctgacatctctgcagcattctggcatccaacagatcttgctgttaaaccagttatgcctggtaggaaaggagataaagctgtagagacagtccctatgcttccgtttgaagctcttcctgctgttgattatattaagttgccacgggaacaaatgaatgcattcaatagtcagatacttcagagtttaagtggtacttttcaggtttcagagaaacagaatatcatcaaatacctggagatgttaagcatcaattctgatgctgcaaatataatcacaaatggtccaattatgctgttgcttataaaaatgctccgtctgtcaaaaacttcagtattgcgtgtccaaattgcttcacttatgggattgttgatacgctactccactatccttgatatagagctggcaagttcagggatttttaatgcactatcagatggtctaagggacaagcatgataaactcaggcgattctgtatggcaacactaggagaattactgttctacatttctactcaatctgatcaagataccaaagaaatcaatgcccaagaatcccctttgaaggataacagggccacagcttcttggcaggttccaagttctgtaattgcgctggtgtcatcaatcttgcgtaaaggtgaagatgatctagcccagctttatgctttacgaaccattgataacatctgtagccaagggacagattggacttcacgtttcgcttcccaagatgtaatcagtcacctgtgctacatctatagagcaactggtaagcaggagaatacaagacttattgcaggatcttgtttggcacgcttagctcgcttcagctcatcttgtattcatttaatactggagaggctggccttcaaggatatcgcatgcacactcattaaaggcaattcacgtgagcagcagatcagtttgaatcttctgaattcagcactagttaacagccaaatcataccaaccatgaaccgctacattcagtcgttaacagaagagaagcagttggttcctggactcatctctcttattgaacagggaactgatgttctgcgtggcaaaacccttctatttgttgctcttctttgcaagaacagtcgaagatggcttcctcatttcttttgcaatgcaaaactactatcagcagttgatagattgggaaaggagaaggaaggcttcattcatcaatgcacagaagcatttgtgcagttggttgcttcattggtcccaggcatccttgacactgtctctagtgatatacaacaggttatgggaggcaagcgtcatggagctgctactgctttaactggacgagctcatccaaagagcataattcatttgtttcctgttatccttcatcttcttgggagtgtttcattcaatcacagagttgtgacgagccatgtattgcttcagttggcaaatcttatgaaaattttggaagcaccatttcaggctcgggatgattttcaaatgacactattgagggttcttgaggcagccacggaggagccttctgttatacttaatgaacacaaaatattcacaagtcgaatccttccaagcttatccgtcttgtacaagggcaataaagatggtgatgccagattcctatgtttaaagatactgtccgatgtgatgattgtgatcttcagtgactcttcattgacgtctaatgagcaaacagtatctgacctggaaaagatctctcagaagtattttctccccatgtatccatcatttgcagaggatgaagatccaatacctatatatgcccagaaacttctggtaatgctgatggagcatgattatgttaaggtttctgatattctcaatgaagcaacagtatcccggtgctttgaatttttgctaggagatttgtctaatgcaaatgtaagtaatgtcaagctttgctttgcattggcatctgctcccgatatggacaccgacattctttctcagcttcaagttgtcagaagaatagggaacctgctggagtttgtgactgcaaaagatatggatgattttctagaaccaaccttggaactttgcagagcattcattatccggggcatcagcagtgacaaaattgtggccctttccaaagagcccgcactccttgttgatagtgccttcagcatgagcattgctgtcgatcaacaatcatgcgtcatggatatatgcgactttggtggcaacatgggcattttcctcgacctagttggaagttcagatccacatataagcgatttggcatcagactgcttggtgctgttactcaaagcagcacctcgggaggctacggtgggcttgctgaccaatcttcctaaactgagcgttgttctggacctgctgaagcatggcacctgcctaaggctgactcgcctgctgtattgcctggccttctcctgcaggcaatatctagcgcaaggaatgatcgtgtcgatatctttgtcagccttgatgcgagtagaagcactcgtgtcggcattcaagggttcacatgatggctgccttgctgacgccgcctcatatttgggcgctgaactgcagcgtttacctcgctgtggttga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MNNFHVYEAIGRGKHSTVYKGRKKKSIEYFAVKSVDKSQRSKVL                    NEVRMLHSLDHPNVLKFYSWYETSAHFWLILEYCVGGDLKGLLEQDKKLPENSIHDLA                    YDLVKALQFLHSQGIIYCDLKPSNVLLDESGCMKLCDFGLARRLKDIEKTNPGDVPQP                    LKGTPCYMAPELFQEGGVHSYASDFWALGCVLYECYSGRPPFVANEFTQLVKSIISDP                    TPPLPDNPSRSFQNLINCLLMKDPAERLQWSELCEHHFWRSRMSIIPLPPQPAFDNMV                    DLSATPYLVERNGDKPSRQSTPPKPRDGLRKKDENSAKVFTPVKNMLSGKKNNAKPSC                    KADGLKGVNILRMSRVAKRNLQREKDKENYRRHPTEASENDTEVKIENNDMELDFGEN                    PEGDAPDDNDGSDNPGSAEDEKLSTQGTDGNEENCMSNQMDMLTDEGPVKAETMIKTE                    HNCSENLDVVATPPSICMRKAQRAKTTSGAAAGSEPSDISAAFWHPTDLAVKPVMPGR                    KGDKAVETVPMLPFEALPAVDYIKLPREQMNAFNSQILQSLSGTFQVSEKQNIIKYLE                    MLSINSDAANIITNGPIMLLLIKMLRLSKTSVLRVQIASLMGLLIRYSTILDIELASS                    GIFNALSDGLRDKHDKLRRFCMATLGELLFYISTQSDQDTKEINAQESPLKDNRATAS                    WQVPSSVIALVSSILRKGEDDLAQLYALRTIDNICSQGTDWTSRFASQDVISHLCYIY                    RATGKQENTRLIAGSCLARLARFSSSCIHLILERLAFKDIACTLIKGNSREQQISLNL                    LNSALVNSQIIPTMNRYIQSLTEEKQLVPGLISLIEQGTDVLRGKTLLFVALLCKNSR                    RWLPHFFCNAKLLSAVDRLGKEKEGFIHQCTEAFVQLVASLVPGILDTVSSDIQQVMG                    GKRHGAATALTGRAHPKSIIHLFPVILHLLGSVSFNHRVVTSHVLLQLANLMKILEAP                    FQARDDFQMTLLRVLEAATEEPSVILNEHKIFTSRILPSLSVLYKGNKDGDARFLCLK                    ILSDVMIVIFSDSSLTSNEQTVSDLEKISQKYFLPMYPSFAEDEDPIPIYAQKLLVML                    MEHDYVKVSDILNEATVSRCFEFLLGDLSNANVSNVKLCFALASAPDMDTDILSQLQV                    VRRIGNLLEFVTAKDMDDFLEPTLELCRAFIIRGISSDKIVALSKEPALLVDSAFSMS                    IAVDQQSCVMDICDFGGNMGIFLDLVGSSDPHISDLASDCLVLLLKAAPREATVGLLT                    NLPKLSVVLDLLKHGTCLRLTRLLYCLAFSCRQYLAQGMIVSISLSALMRVEALVSAF                    KGSHDGCLADAASYLGAELQRLPRCG</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
−
DNA = <dnaseqindica>6199..7317#5120..5989#2524..4107#2371..2430#2215..2293#2074..2135#1425..1500#1210..1262#359..448#171..218#gagcgccaatctcaaatcgaaatcccgctctctctctctctctctctctccccccccattcctccgcctcaaatcgcaaaccctagccgtcgccgtcgacgagaggtcgacgagaagtcgacgagaagaggaggaggagaagctgctgctggtggtggtggtgctccgccatgaacaacttccacgtctacgaggccatcggccgcggcaagcactcggtaacccccctctccgccttcctctcctcgtcttccctgtgttccccgcgcccccggatccgctcggattgggtgcagatgggtgagatttctgatttgtttttggtgtttttttttttttgggtgcggtggtccggaagacggtgtacaaggggcggaagaagaagagcatcgagtacttcgccgtcaagagcgtcgacaagtcgcagcggtccaaggtcctcaatgaggtgagcgcggcgccgtcgtctccctgctctttcatcagtagtagctggtaggcatgcgccgccgcgattttgggtggggatattttgaatcggagggcttggctcctggcgggcctggttaatttggtccgtgaaatggtccttggagtgatttgatctgcgggtgcctatggatttcccggaagcaaatcgtgatatgatatccaagattgatttgatagtttaagtgactgttttagactgtgtggataccgtggctttcgttaaccgctgttttctgggcatgcagagtgcagagtttccttgtaagctgatgttgtttaaatgggcagaatgttacattgttcgttatatagtatcttgatgtactagtggatcgctatttatttcctgggaaaaagcactttacatgcttaagctgggatgctgtttagattttgatttcctgataatcgtgcgaaacaatctatttcttatagccatttctagagaagatgaaatgaggcaacataagttacatttggtgtgctgtcaaatgttatgttatttggtcaggaatgtaccttctctttgagcaaagcgcttaagggtgaagatcagtagtttagataatattttctggatagaagatgagcacatgttctagtcttcaattaaaaaataatcttttagctagcatggtaagaaaaatagttaatgagcctgaggaatgaggatgtttgcttactccactaatagtacttctgaacttttctttgcaggtccgaatgcttcattccttagatcatccgaatgttctgaaattttactcatggtacgtttctaggggactagtgttgtggtgcaataatggcaagcagttcactttttagaacaataatgacaagtatagtctggcagtttggttgcaatcatcgttattgttcccttaacattgtactacaaaccatacttatgcctgtacctgttgtaccaggtacgaaacctcagctcatttttggttaatactggagtactgcgttggtggagacctaaagggcttgcttgagcaggtatctcgcttgtcagtttaagcagcataccattttctagttcaaagcacgctgtcagctgtttacttgtacaatagcacacgtttgtatttgatttgcatttgcttcatttacaaatatttctctctctctctctctctgtgcatgctgagatgtcttttgtttgctccttaagaaattttttaaaaaaacatgttcattttttttagcttatagctggtactccttccatcccaaaatataacaacttcttcacctacattctcttcttaaccaatcacaaccttcccccatttaatttctctatttactttcttttctcaaccaatcacagcctcccctccccctcaatcttcatacgggcttaaccctaaaacttcttatattttgggatggaggtagtagaatggaaggaaaattcattgtcaaactgacaggttaaaaacttttgctttggctgtctatttatgtacatgtcacatttaagtatgctctaatatgtacccaaatttttagtattttgtgttagtatatttgcatatgaacattttacatttcttcaatgacctgcaggataagaagctgcctgaaaattctatacatgacttggcttatgatcttgtgaaagctcttcagtaaagtttctttccttgtttcattatttctactgtatgatgtgtgaaatcttatttgtcaaaacaatttggactttaggttcttgcattcacaaggaattatatattgtgatctgaaaccatcaaatgttttacttgatgaatctgggtgcatgaaggtacttactggatcaaataattcatacagtgaggcaatagcttgtaactaacgatatatatttctttaattttctagctgtgcgattttggattagcaaggcgtttgaaagacatagagaagaccaatcctggagatgtgagcttccattttccttttgtatctcatttcatttccttgtgtttccatctacatttgattattttcccagcttaatttctcctcgtgtaggtgccgcaacctttgaaggggactccatgttatatggctcctgagttgttccaagagggaggagtgcattcatatgcttcagatttctgggcacttggttgtgtattgtatgaatgctattcaggaaggcccccttttgtggctaatgaatttacccagctagtcaaatctataatttcagatcctacaccacctttgcctgataacccctcaagatcctttcaaaatctgatcaattgcttactcatgaaagatcctgctgaaagattacagtggtctgaactatgcgagcatcacttttggaggagcagaatgtcaattattcctttacctcctcagcctgcctttgacaacatggtcgacctttctgctacaccatatttagttgagagaaatggtgataaaccttctagacagtccacaccacccaagccccgtgatggcctacggaagaaggacgaaaattctgctaaggtgttcacccctgttaagaatatgctaagtggtaagaaaaacaatgcaaaaccttcctgtaaggctgatggattgaagggtgtaaatatcctcaggatgtctcgtgtagctaagaggaatttgcagagagaaaaagacaaggagaactacaggcgacaccctacagaagcttctgagaatgatacagaagttaagattgaaaacaatgatatggaacttgattttggtgaaaatccagaaggtgatgcacctgatgacaatgatggatcagacaatcctggatccgcagaagatgaaaaactttccactcaaggcactgatggtaatgaagagaactgcatgagtaatcagatggatatgctcacagatgaaggcccagttaaggctgaaaccatgataaaaactgaacataattgttcagaaaatcttgatgtggtggccactccaccaagtatttgtatgaggaaagcacaacgagcaaagacaacttcaggtgccgcagctggttccgagccatctgacatctctgcagcattctggcatccaacagatcttgctgttaaaccagttatgcctggtaggaaaggagataaagctgtagagacagtccctatgcttccgtttgaagctcttcctgctgttgattatattaagttgccacgggaacaaatgaatgcattcaatagtcagatacttcagagtttaagtggtacttttcaggtttcagagaaacagaatatcatcaaatacctggagatgttaagcatcaattctgatgctgcaaatataatcacaaatggtccaattatgctgttgcttataaaaatgctccgtctgtcaaaaacttcagtattgcgtgtccaaattgcttcacttatgggattgttgatacgctactccactatccttgatatagagctggcaagttcagggatttttaatgcactatcagatggtctaagggacaagcatgataaactcaggcgattctgtatggcaacactaggagaattactgttctacatttctactcaatctgatcaagataccaaagaaatcaatgcccaagaatcccctttgaaggataacagggccacagcttcttggcaggtcagaaactcaaaatgatgagtatgttatgtctgcatgcttagtaatttatctgcatgttgttgggtcatatgcttaggctatcttatatagtaacctgcagttagaagatcaatggcaagttactggtgctagaaatatctaagagcttttactgattcaatctgattcctgcatggaacgtaggtgccttgctcactgtttatgttatgaagtggaagctccttttggcctcttatgtgtggcgcttgttgggaagtgttcttcgtgggaagggtcatttgaccctttctttgtaaatatttctctcttctcaatggaatgacgcttagttctgcgttttagaaaaaaaaagaagtggaagcttctttcagttgaaagtatatactgcattattgaatttttcacataaccacataatcacactgcccaccttcataactattactataatatatggactaaattatgtttatatacatgctcttttctttgattttgtgtctatgcacatgtttattgttagtcaaacctgtatgattttacagaaaaccacataccaatcctgttcaatggctagcctaatcaggagtgattcaaattacatctatccgttagttttagtgattgtatgtccatgaattgagggtggatctctttgtcaatttctgtttctgcaacttgataaccttgctctcacctataggttgaactttgcctctccaaagggcctgatgaacttaagggacataattccataccaattttctttcaagtgttttaacctgctttccttttaatgactatattcttgtatttgtggaaccatatataggtcagctatgtaatagtgttaatgaattaatgagacctttactttcatatcttactggtcaagtagtatatatatcatatatatatacatacatgtgaggaatccttttatcttgattcacaactatgacattaattattgtgttttattaatgattttactttgcaagttgtgcaggttccaagttctgtaattgcgctggtgtcatcaatcttgcgtaaaggtgaagatgatctagcccagctttatgctttacgaaccattgataacatctgtagccaagggacagattggacttcacgtttcgcttcccaagatgtaatcagtcacctgtgctacatctatagagcaactggtaagcaggagaatacaagacttattgcaggatcttgtttggcacgcttagctcgcttcagctcatcttgtattcatttaatactggagaggctggccttcaaggatatcgcatgcacactcattaaaggcaattcacgtgagcagcagatcagtttgaatcttctgaattcagcactagttaacagccaaatcataccaaccatgaaccgctacattcagtcgttaacagaagagaagcagttggttcctggactcatctctcttattgaacagggaactgatgttctgcgtggcaaaacccttctatttgttgctcttctttgcaagaacagtcgaagatggcttcctcatttcttttgcaatgcaaaactactatcagcagttgatagattgggaaaggagaaggaaggcttcattcatcaatgcacagaagcatttgtgcagttggttgcttcattggtcccaggcatccttgacactgtctctagtgatatacaacaggttatgggaggcaagcgtcatggagctgctactgctttaactggacgagctcatccaaagagcataattcatttgtttcctgttatccttcatcttcttgggagtgtttcattcaatcacagagttgtgacgagccatgtattgcttcagttggcaaatcttatgaaaattttggaagcaccatttcaggtatgatctaagaacttcacgcacggttatgccatgatgaaaaaacatgacgaccacattcattttgtaactgcacttaagtgtcaaatcaatcccatcctttgttttgatgctgcgctgtggctcttgccttaacagttttgcattactactgtattttttaacatatcttgaccttatctgattatttacgtgtcttatacatccaggctcgggatgattttcaaatgacactattgagggttcttgaggcagccacggaggagccttctgttatacttaatgaacacaaaatattcacaagtcgaatccttccaagcttatccgtcttgtacaagggcaataaagatggtgatgccagattcctatgtttaaagatactgtccgatgtgatgattgtgatcttcagtgactcttcattgacgtctaatgagcaaacagtatctgacctggaaaagatctctcagaagtattttctccccatgtatccatcatttgcagaggatgaagatccaatacctatatatgcccagaaacttctggtaatgctgatggagcatgattatgttaaggtttctgatattctcaatgaagcaacagtatcccggtgctttgaatttttgctaggagatttgtctaatgcaaatgtaagtaatgtcaagctttgctttgcattggcatctgctcccgatatggacaccgacattctttctcagcttcaagttgtcagaagaatagggaacctgctggagtttgtgactgcaaaagatatggatgattttctagaaccaaccttggaactttgcagagcattcattatccggggcatcagcagtgacaaaattgtggccctttccaaagagcccgcactccttgttgatagtgccttcagcatgagcattgctgtcgatcaacaatcatgcgtcatggatatatgcgactttggtggcaacatgggcattttcctcgacctagttggaagttcagatccacatataagcgatttggcatcagactgcttggtgctgttactcaaagcagcacctcgggaggctacggtgggcttgctgaccaatcttcctaaactgagcgttgttctggacctgctgaagcatggcacctgcctaaggctgactcgcctgctgtattgcctggccttctcctgcaggcaatatctagcgcaaggaatgatcgtgtcgatatctttgtcagccttgatgcgagtagaagcactcgtgtcggcattcaagggttcacatgatggctgccttgctgacgccgcctcatatttgggcgctgaactgcagcgtttacctcgctgtggttgagccgaagtttggtcaggtgctggcttggttggcattgtgcaagtgatgttcatagggatcataagagagggcctcagccttgtatttcttcaccgtttcttgcaccaagctatgatcatgggttctcaccatccgaagtgatgactgatgaaccatccgattggctgtgtgatcatttatctatatgcaacgtggagctgctgttctttcagtataccatttctggccaaatctggagaggcagcttgtggccaaaacccttcctgtatttcccctgtgccaattttggttggcgtttcatcggttttcagtttctcaccatgtaatgctgtagagtttcatagcccttaaaatcatgtatatttgtacactcccttttactttaccaagcaacggggtggaaatttattgttatgaatgcctgtaaagctctgtgaatctgtgaaccaacaggactatattggagcatggtgctatcaacct</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049174.1 RefSeq:Os01g0259400]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 1]]
 
−
[[Category:Chromosome 1]]
 

Latest revision as of 04:39, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information