Difference between revisions of "Os01g0503400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0503400| Description = Similar to OsNramp1 (Integral membrane protein)| Version = NM_001049674.1 GI:115436797 GeneID:4324486| Length = 1094...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0503400|
 
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Description = Similar to OsNramp1 (Integral membrane protein)|
 
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Version = NM_001049674.1 GI:115436797 GeneID:4324486|
 
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Length = 10949 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0503400, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:19110867..19121815|
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CDS = 19111243..19111536,19113329..19113424,19113609..19113734,19114050..19114154,19114434..19114604<br>,19115044..19115113,19115433..19115614,19118032..19118141,19119088..19119192<br>,19119272..19119350,19119457..19119497,19119754..19119832,19121355..19121549<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:19110867..19121815
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:19110867..19121815
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggaggagggggcgaagatcgggagggagcacgagcagcagcagcagcagcacgggagggtgaacggtagcgggagggtcgcggccgtcggtggcggcagcggcggtggcggggacgagattgagattgaggtcgccgcagccgcaggggcttcgccgtcgcggcaacacggcggtctgcacggcgatgtccaggcacccacttggaagagatttcttgcacatgttggtcctggatttgttatctccatcgcataccttgatcctagtaacttgcagactgatttggtagctggatccagccacagatattcgttgctatgggtactcctatttgggttcatatttgtgttgactgtacaatcattggcagcaaatttgggtatcattacaggaaggcacctcgctgagttgtgcatgggtgaatatccaaagtatgtcaagtactgcctatggttactagcagagcttggtgttattgctgccactataccaggagttttaggaactgctttagcctacaacatgctactccacatccctttctgggccggtgtcctagcatgtggggcatgcactttcctaattctcgggttacaaggatatggggctcggaaaatggagttcactatatcagttcttatgttggtgatggctacttgcttttttatggaacttggcaaagttaatcctcctgctggtggggtaattgaggggctttttatcccaaggcccaaaggggattattctacttcagatgcggttgctatgtttggttctcttgttgttccgcataatctcttcctacattcttctttggtgctaacgagaaaaatgccatatacttccaaaggacgcaaggatgcttctacattcttcttgcttgagaatgcattagctctgttcattgcactacttgtaaatgtcgctattgtatcaatatctggtactatatgtgccaacaatctctcatttgccgacacaagcacgtgcagcagtctaacattgaattcaacttatgtactactcaagaatattttgggaaaatcaagttcaactgtgtatggtgtggccttattagtttctggacagagctgcatggtggctacgagttatgctggccaatacatcatgcagggcttctccggaatgagaaagtgcatcatatatcttgttgctccttgtttcaccttattacctagtttgataatttgcagcattggtggtactttacgagtgcatcgaattatcaacatagctgcgattgtactatcatttgtgctgccgtttgctctaattccactcattaaattcagtagcagctgcacaaatataggaccatacaagaatgcaacatctattatccgaatcgcgtggatactgtcattggtgattattggaatcaatatttatttcttctgtactagctttgtcgcttggcttgttcatagcgaccttccaagggttgttaatgcaataattagcagccttgttttccctttcatggcagcctatattgctgctctgatctacttggctttcagaaaagttaacctttcagatccattccccaccaattcagtttctggtgagattgaagttcaacacatacaaatacaagagaagcaggaagatttaggtgtacatttatga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MEEGAKIGREHEQQQQQHGRVNGSGRVAAVGGGSGGGGDEIEIE                    VAAAAGASPSRQHGGLHGDVQAPTWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSH                    RYSLLWVLLFGFIFVLTVQSLAANLGIITGRHLAELCMGEYPKYVKYCLWLLAELGVI                    AATIPGVLGTALAYNMLLHIPFWAGVLACGACTFLILGLQGYGARKMEFTISVLMLVM                    ATCFFMELGKVNPPAGGVIEGLFIPRPKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLT                    RKMPYTSKGRKDASTFFLLENALALFIALLVNVAIVSISGTICANNLSFADTSTCSSL                    TLNSTYVLLKNILGKSSSTVYGVALLVSGQSCMVATSYAGQYIMQGFSGMRKCIIYLV                    APCFTLLPSLIICSIGGTLRVHRIINIAAIVLSFVLPFALIPLIKFSSSCTNIGPYKN                    ATSIIRIAWILSLVIIGINIYFFCTSFVAWLVHSDLPRVVNAIISSLVFPFMAAYIAA                    LIYLAFRKVNLSDPFPTNSVSGEIEVQHIQIQEKQEDLGVHL</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>10280..10573#8392..8487#8082..8207#7662..7766#7212..7382#6703..6772#6202..6383#3675..3784#2624..2728#2466..2544#2319..2359#1984..2062#267..461#gggttttgagagagggaatgggttaggtgagtgctgttcctgcccccaagccgacgactttcgtcctcgatgcttgcgtcgcatctcgaatacaccgagtgtacgttgggagaagtacagatatgcagagggatcgcggagttgacccgtattgcatgcaggcagctgctgcttttcttgcggcaaccggagctggtgctggcctcgccaggttcaggttaatggtcaaccaccaccaccactagttgcgctactgagacagagcaatggaggagggggcgaagatcgggagggagcacgagcagcagcagcagcagcacgggagggtgaacggtagcgggagggtcgcggccgtcggtggcggcagcggcggtggcggggacgagattgagattgaggtcgccgcagccgcaggggcttcgccgtcgcggcaacacggcggtctgcacggcgatgtccaggttagtttgttcttcttcctttcttcctcctctgctaggctgcctgctgtcaatttcttcttctctcctgctgtccgcacaagtaggaagcaaaccatgtgtagcacgattgcctcagccaattcagacatctgaggaatatccgtttgattgatttctgaaatgaatatgtacggttgatgatctctatgtactctgctttgtaaaattagcacagacttttcctcaaacggggatagaaacaggcactaatcaaaatttctgataacaatgaggacttttggctttgctagaatattttgtataggaaatctgttggctcgaccgtagatcgtatcatctcttcgtctggttacaaaataatagaccctttttgtggtatattacttagttttgccatggtttgattattcttcgagtagttggcaaggatgttttcttgcaataatgattatcaaccgacatcggttaggcatgtttctcttgggcttcaatttaggagtaagccgtattccccaaaaaaaaatttaggagtaagccaattcaactcactcgcgtattgccgagttgagattttagtgtcattcctttcacgttggtgtagctgactttgtattatgacttattctacaatatgctatcaacaaatgttgtgttctacaaaataccatcgacgaacatgaatttcacaatataatatcagacaatggcttttctttccttttataccgtcatttgtcagtgacatgttcttttctctatttagtgccgcaaaagtacagttcacccctactataacatgggttcaacaaaaattgcgagggtgtctcggtcttgcaagtggtagaaaacaagagtaatctttggtgttccgcaggagctttggcacttcaaaagctcctcagtgggatggctaacctaggcagttagcgctcctcggtgtggtcttgggtgcgtgggtctcggtgggagggctcgggtcctcctactttgtaaatattttctactttgttttttcttccccttaatgaaatgaaacacaattctcctacgttttcgagaaaaaagaaagaaaagaaaaaaaccattttattatcatgatctttcatagagttaaacaattatcgatcgtaaacttcaaaaccatgaagtatatacccttgaacttgtatttcattcagttttcaactttggcccaaatttagagttgctttgattaacatggctctaatgtggcaatctagctcaaggatcaaacaattcttgaatttttaaaattagatgtcttccaaattttagaaaaatatttcacttgtagttctctgatatatgcattacctacataaaagattaactggttagggaaaaactaatgtttaaaacagtgtaaaaccatctattacaagacaattgaactttattccaccagggaaaaaatatttaagttgtaaatactgcaacatgcaactttttttttcagaactttttgagtccatttagtaatttatatctgtgagagcaggcacccacttggaagagatttcttgcacatgttggtcctggatttgttatctccatcgcataccttgatcctagtaactgtaagtcccctttgtccttcaatcttccttggactagaactatgcctgtctctgctcaccagtttgtgtccatccatccatgcatggtgagaaaaagacatttttaagtcataaatggctttggtaaattcaacaataggatcaaggaacatggatggataccactagaattcctaggcaggacatgctcatataccaccgttttctttttctagtactaatatattgaactacttcactttgaaaattggaacagtgcagactgatttggtagctggatccagccacagatattcggtataaagctctcaaaatttctgtggaatattatgttatacatttttgtcaattgattgtagatttgccatctcacttctccttcattcatttttaaaattttcagttgctatgggtactcctatttgggttcatatttgtgttgactgtacaatcattggcagcaaatttgggtatcattacaggtgaaactaactacccatattatcaagctggtgacaaaaatacatgttctatgaaacttaccatataaatatattgtaggaaggcacctcgctgagttgtgcatgggtgaatatccaaagtatgtcaagtactgcctatggttactagcagagcttggtgttattgctgccactataccaggaggtatgtatcagtatttgttgtttgtctttgctttctataaaagttgaaatactatttttacttgttacttggaaaaatagtatcctcttttacagcatatttgttgtccatgtataaaccatgggggtaatccataaattaggttaatattttgaatgaacttccttgtgcagagtttgttttattgaattataaatttaatagagctattcaataactacggctggtggttgagcaataggttgtaagcgaactgaaattttgtgtttcatcaacatctgtagcatgttgctttatgtttggtttattcttcttggcatggaaaacttgtaaataagtgatcatggctttgtccatctctgggtgcagtggccgggataataaaatattccattatctaaaatattgatgattattgcatataactctaattatattttgaagatagaaacaccaatagtgtggtttatgagaatgttactctcacggtatagggtttccatgtgtttatcttgctttatttcttaatcaaatactcccactggtcacataaatcaatttggacatgtgctaagtcaaactttcaaaactttaaattgtcatatttctttctaaatagatttgttgtggaaagttccttatagtattatattgctggtttataataaatatattgtattagaaattaccatctaatgttgcactatggagaccatgtcaatgtccaagataacatgtttatgtaactggtgggagttattttcttgtgtgccagttaacttatctatcttgatcacattttttataatctatttcttgacataggcttacaagatctgcactatacactacagttctcctttataaatcttacagaactttacagttttatcttctgtatttaaattcttcaaggttcatggtgctttctgtggtctttgtgcagttttaggaactgctttagcctacaacatgctactccacatccctttctgggccggtgtcctagcatgtggggcatgcactttcctaattctcgggttacaaggatatggggtaagaatttttctctgcttataaaataaaaaagagtaaattacactagcggtccttaaacttgtaacgaggtttcacttaggtccacgaacttgcaaaacgagcatcgagatctctaaacttggtttaatgtatcatcctagtccaaagcatcgtttgactgtggtcttgcctacgtggcatgccatgtggacgatgacatggattttttaaaaaaaatttctcccttctgccactgacaggtactggcagggcctctcttaccttacttttccctcactttcgccggcgaccgaagcggcgacgggcggggtggccgacgagaaaggagcagcgcgcgggagccggccggcgggaggagaggagcggcgcgtgtgcgcgggcgccggccgacgggaggagaggagcggtgtgcgtacacgggcggcggccggagaggataggagcagcacgggcacgcggggggaggtgtcgccgaccacgcccggggaggggtcgccgactgcggccgtgcgtgccaggggaggtgttggccatggagcgcgcgagctcggtggcggagatgaagccattgccgccgccggcctacccgccccctagctaaccttgccggccggctgccccgcttcgacccgcctgtcacccgcttcggtcgccggccgcccgtcccactcagtgttgtggatgacggaatacggatgtcggacggagagggtaccgctaaacgattaatcggagtacggatgagtaatcggaatttgacggaaatttaatgttttggacaaatatatgtacataactcataaatcataatagcttattatttttgacagataaatgcatataactacatatatacctactattcttaaataaaaataaggataacatgacattaactcgacataaaaatatggtagattggatttgaaagaggtttagatgaaaagaactaaccatagacttgcaggttgtagcggtaggaatgagctgcgaggattttgggattgcaaacgacgttctgttagctatatagtgctaggttacataactaatgggccagtatagttatcgtggcctggctgggcttgccttgtcacgtgattaggcccgtttattcggccgattagtcggatacggccgattagtcgctaatgatggtgattatacatcctgaaatgactaatgtacaccgttttgctaaaacgtgacggagaggtcagcgccaccattttgacgtccgaatatacagccgtaccaaccgttatccacaacactggtctcacttaattggccgaagagagaggatagagaggaggggagagtagtgaggccctgacaggctgtcagcggcagaagggagaaaaaaagaaggaagaagggagaaaaaataaaaaaaaatacatgtcatcgtccacgtggcatgccacgtaggcaagaccacggtcaaacgaggctttagaccgggatgatacattaaactaagtttagagatctcgatgctcgttttgcaagttcgtgaacctaagtgaaacctcgttacaagtttaaggaccgctagtgtaatttactcaataaaaaaacacaattaaggagctcactaaatatgatattttcaggaaaaaagtaaaggaaaattttgtcaacggtgaatgtccacttttcatatttgtcactaattcttgtgacttcttgttgattctactcttccatcaagccacatttccccacattcatcagcctgcactatcactgccctccgtgaatcttctgcttcctccctctccacctgcattagccaggaccttttccttgaaggatggagaaaatggaggataacgccattgtgctgtgaagcatccaaatatggaggaacttgtcagcgttgactggtggtggaggtggaggtagagaaagctgatgtgagcgtagagaatgtgaaagaagacgagggagaaaatacactgcagaagacagtggcaaaatagtcagttgacagacaatggtttttgactgaatcagccagaacctccatggcataagcaaaatgtggcttgatagaagtggcataaacctgatctcacaaaaataaatggtatgtgtgagaagtggacattcactaatggaatatgcaaaattgtacttaaaataatttccgctaaaaaatatatacaaaatattcccattcattctactgtccgaaataactatatactatctgagataaataatactggcattcatttcagatagttgaatgaatgggaatttcgatgagagagagatcacacattttttttttttggtatatagtttttgtacattatttccaccttattaacattatgaaaggtaaaatatgttttagattgtatcagccagcagattgacatgcatatcatccttttaatttgtaggctcggaaaatggagttcactatatcagttcttatgttggtgatggctacttgcttttttatggaacttggcaaagttaatcctcctgctggtggggtaattgaggggctttttatcccaaggcccaaaggggattattctacttcagatgcggttgctatgtttggttctcttgttgttccgtaagtatcactcccacattaaatgattttaatgattatcttagaactatgattatacttttgtctctgaaaattcaaatgaattttctttttcattgccactactttttagttgtacatcattattttcatttttttttcaattagttaacgattataattcaggttttactaatttaaaagttatatatctgttatataaaaaaaaaacctttgaaaggtctttcacactctttaaaaggtattattgtggctaccccgtcagatgtaaagcaaaaggtatatttcactaacttgctctgttcttttataacattaggcataatctcttcctacattcttctttggtgctaacgagaaaaatgccatatacttccaaaggacgcaaggtaaaaggatattttttatgttaaaattaaaattaatttttaacctctggaataggctacttctttttacttttttctctaaactgatgttgattttgtctgtccagtgccccttagtatatgggctataattctataccagtacctctagattattcattttcgtatgagacatagcatatttgaacaaaagttttcgtttactttcatgttattattgaggaatttcaaccatgaatgaataagcatatataacatgaaaaactctatttttaagtacaatgaactctacctaataatttcagtatttcagtattctatagaaagtctatgacaatcctcaaaaggaggtttttttttccctttttctagctctttatatttctgttcaaacagtcattatttcttcgtaatataatttgaattcactttcttgcaggatgcttctacattcttcttgcttgagaatgcattagctctgttcattgcactacttgtaaatgtcgctattgtatcaatatctggtactatatgtgccaacaatctctcatttgccgacacaagcacgtgcagcagtctaacattgaattcaacttatgtactactcaaggtttgtattcaatagaacacttttaggatgtcattgaccttacatttgaaaactataagccttagggggttctgacttctgacagtattttagtattgtggagctaaatagcaatactgaacgtgtagcaatacatgcagtaatcttactgtatacatgtttcacaactaaaaggaaacaccaggccacaaaattatataaacggaaacctaaactagtaaagtgtaccattttactagttcttcctcattctctatctttgatatgtttgtgatgcagaatattttgggaaaatcaagttcaactgtgtatggtgtggccttattagtttctggacagagctgcatggtggctacgagttatgctggccaatacatcatgcaggtacatttacctaattactggagtagattagattagggcctcaaggataaacctagtagtacataccttcagaagatgtatcatctcaatattaccaaataatatttcgagctaattgcatgcctactgaatttgaaatgtaactttgcttagaaaaattgaaatgtaacttctgtgttaaaatatttagttacaactggtaatagatagaaatctggccaagctctagtttcatatcagtatccaaatggggattttctgtatttttttcctccctaaatttcttcatgcaagatttaccaaatgttgttacagggcttctccggaatgagaaagtgcatcatatatcttgttgctccttgtttcaccttattacctagtttgataatttgcagcattggtggtactttacgagtgcatcgaattatcaacatagctgcggtaatttctcttgataatctcttcttatcaactaacataagctaggtataggcacaatgacacaaaaattcaaacaatgttgaataaaacatattatatttcactaataggaactttaaaatccatagattaaacgagtgtaataattatgatatgttctgtaatgtgattttttgtgatgcagattgtactatcatttgtgctgccgtttgctctaattccactcattaaattcagtagcagctgcacaaatataggaccatacaagaatgcaacatctgtaagcttgctaaaacagtttttactattcaatttgtttatgacatactctatctgtttggttatactagtcattttggacacgatcatagtccatttccattacataactttcatttagtttgtatgtataattatgtcctagagaatttatgatatatatataacatgaaaaatatcttttacgagaaatctaaatgcccttatgtatgttagcggataattgtaaattaagaaaaaagatatttttgtgctagatgtatgtaggatcgtacactacaaattattgtatgatacactcttaccagggcatctaaaagttacagatggaacaataaaaaaccaaaatgttagaaccttatttgcccctaaaagttgatatgcacgtccctcattctctcagttacatgtgggtccaagctcaacatgtgaatgtgccaagggcaaataagcactcatggaaaggaatacagtgcagtgggttggccttgaccaaccaaatttcttcaacctccccactgccacttacacaattcatttcacttttgtgaccagctattgctgtacatatgtaaataacttatacgccttacttaccactggtaactatacaactctaaagtagtttgtgctgggaaaaaacactaattagcagactcttttcctcttttctaaacagttgtaaatagaagctataagcatgatagtccccttttcatgaacatttttcttttgtgcacatacccccatttcctcagtgtccactttgcattgagtttgacacacaatatttccccagcttctcttattgataaattgatgtccctgctgctatttttatgtgccaacatgtaaaccataaaatcattggataaataataattagcatctctcatatatatataatatatttttccacttaataacatgccaatgctttttagaaaaggggtgcaaatacgagctagtgtatagatggcaacagaaagaaaaaataatgttagattctagttccagccaggtatatctttatttgcataaaatggagttggtagacagtggtgattgttggttcttccctgtctgatactctatggttgaaatatatttgcaaatctatgtctttcattcatatcaaaatgatttatgggtaattctttcatagttatactcttagaatgaaacactatatcaactagggaccaaatgtagcaacatataatttaattactttgttatgatagtctaagaactactatatggctatccatgtgtagagttctggtgtatcaagtctaggttcatgtgcatgttggaacatgggcgttacatatatcccattgtaagagtgaatatatgagatttgaaatctcaactagaactgtaggctgatcacgaatgcatgttactatgttagagctttcaatttgtaaaattacctcatagcatggtgtttcagtaaacattggagtatataattatggttcaaattctagagtgagagtaatttcaaggtagtaacgtttcttgttgtgttattatattctgcatccatatttttagacaatggttttacttcaaatgaatcacagttacttgaagaattatttccatttaattactagataatcggaaatcttcaacataatttgcattattgcatagaataacttttacttcctcaataacaccatagttttcattattccctgtgttgtcttaaaatggcatacatttgtcatcaaattgaactcattcttcttaactcttgggaattttactcttttatgtagattatccgaatcgcgtggatactgtcattggtgattattggaatcaatatttatttcttctgtactagctttgtcgcttggcttgttcatagcgaccttccaagggttgttaatgcaataattagcagccttgttttccctttcatggcagcctatattgctgctctgatctacttggctttcagaaaagttaacctttcagatccattccccaccaattcagtttctggtgagattgaagttcaacacatacaaatacaagagaagcaggaagatttaggtgtacatttatgaatagaaaaggtaacaccgtccatgtgattcttctctggacatgcatcaagtatttagcatatactgaaattgggacttcaattcatttgaagatgtatatagctcaaagcctcgaaatcatttagaaacattctagctagcaaccgtatgttcagtacaattaggcatatagcaaaacttttctagtcataggtgttgtcctttcgttaattgctcatcaaataaaattctcttccacgccatagattcaaatgtgtgacgaactttactataggtatatggcaaaatgcatggaacaatggtcagatgccctgttttgcaaatatgttttttaacataatggaattcattctggcctttacttcgtagaagttgc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049674.1 RefSeq:Os01g0503400]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:44, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information