Difference between revisions of "Os10g0488300"

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(Created page with "{{JaponicaGene| GeneName = Os10g0488300| Description = Vps52/Sac2 family protein| Version = NM_001071446.1 GI:115482635 GeneID:4348958| Length = 10254 bp| Definition = Or...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os10g0488300|
 
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Description = Vps52/Sac2 family protein|
 
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Version = NM_001071446.1 GI:115482635 GeneID:4348958|
 
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Length = 10254 bp|
 
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Definition = Oryza sativa Japonica Group Os10g0488300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
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Please input expression information here.
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AP = Chromosome 10:18943678..18953931|
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CDS = 18944106..18944179,18944501..18944558,18944995..18945090,18945356..18945457,18945986..18946069<br>,18946686..18946766,18947310..18947453,18947600..18947691,18948380..18948461<br>,18949200..18949382,18949742..18949857,18949937..18949995,18950572..18950672<br>,18951432..18951482,18951570..18951749,18952694..18952828,18952910..18952984<br>,18953272..18953329,18953417..18953718|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008403:18943678..18953931
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source=RiceChromosome10
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008403:18943678..18953931
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source=RiceChromosome10
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggtggtcgtccatggacagcgggctgaagactcgtttggtgggtttttctccttcgatgaggacgctgccagtgaggatatgtcattggatggtttggatgaggaacttgaagagcacaaggattatgatgtattgataagtattctagcgaatggtgaaaaacagagagatatggcaaccttggttgaaggcaacctaggccatgctgaacaggatctgattcaagattatgttgaagatagtgacaacctggtattattgcatgatcagattcatgactgtgacattattttgtcacagataggatcacttcttactggattccaggttcacattggttccattaactcagaactaagaagtctccaggagagatccttggatataagtgtcagactgaagaaccgcaagttggttgagacaaagcttgcaaaatttgtcgaagagattgttgctcctcctagtttggtgactgttattatcgatggagagataaatgatggttatgctaaaagtttggaaattttgagcaaaaagttgagattttctcaagttgatcctatgattaatgcatcaaattctctgaaggatattaaaccagaactggaaaggcttctacaaaaggcattatgcaaggtgtccgactatctcactgaattattcttttccatgagaaagcctggaactaatatccagatactgcaacaaaatatggttcaaaaatataggtatctcatcctctttcttagagagcatggatccaaggtctacactgatgttcgtgcaacatatgctgatacaatgaacaaggtgctgagtgcacattttcaagtgtacatagaagcattggagaagctcaagcttgacattggcgtatcaagtgatttgactggatatgacactaatatcattgaccttatatcaaggggaagagagcatttaagaaatcaccgtttcatgttttctttaggtgaacgggcaagcattttgaaggagattgatcgacctggcttggttcctcatatatctgaagtcaatcctgtaaaatacccatatgaagttatttttaggagtatacagaagcttctgatggacactgctagctctgagtatctttttatcaaggcattctttggtgaagaatcattgttttatcaggtttttcaaggaccttttaaagttattaatggacatttggatcatactcttcgaaattatcatgacgcggtatgcctaatgctcatgatctgcataactaggaaacaccagttggttatgttgaacaggcgacttccttgtctagacgcatatttggataaggttctcatctatctctggccacgcttcaagactgtttttgacatgtatcttcaaagcttgtaccggtgtgatacaaaattgttatgggtagatggctcccatccacaccatattgtaaggtgctatgttgagttcacagcatcccttattcaacttaatgctgaatgcggagatggtcagcttgatatgaacttggaacgcttacggctagctgttgataatctacttggtagacttgctgaaaattttgcaaaccccaagacgcaacacttgtttcttctgaataattatgacatgaccatttctgttctgaaggaagccggtgatgaagcaaataaactgcaaagctattttgaagagaagctagaaagtaacatgatatcatttgcggatgaattgcttatggagcatttcaaggatttgataaaatttgtgagaagccgtgtctctgaagaccttattctttatactgaatgcccaagcattgccgatgttgagccaattgtgaagaacttcgccgtgacatggaaaactgctctagagctcatgcacaatgaagttgtaacttcttgcagtaaccttttagctgggatggagattctaaaagcagcaatggttcagctactcaatgactacaacagactctcagaatgtgtgaagataatcccaggaggatcaactctgaacaggaatctggtttctattacatccatttcatatgagatgaggaaatattcaataacactctag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MVVVHGQRAEDSFGGFFSFDEDAASEDMSLDGLDEELEEHKDYD                    VLISILANGEKQRDMATLVEGNLGHAEQDLIQDYVEDSDNLVLLHDQIHDCDIILSQI                    GSLLTGFQVHIGSINSELRSLQERSLDISVRLKNRKLVETKLAKFVEEIVAPPSLVTV                    IIDGEINDGYAKSLEILSKKLRFSQVDPMINASNSLKDIKPELERLLQKALCKVSDYL                    TELFFSMRKPGTNIQILQQNMVQKYRYLILFLREHGSKVYTDVRATYADTMNKVLSAH                    FQVYIEALEKLKLDIGVSSDLTGYDTNIIDLISRGREHLRNHRFMFSLGERASILKEI                    DRPGLVPHISEVNPVKYPYEVIFRSIQKLLMDTASSEYLFIKAFFGEESLFYQVFQGP                    FKVINGHLDHTLRNYHDAVCLMLMICITRKHQLVMLNRRLPCLDAYLDKVLIYLWPRF                    KTVFDMYLQSLYRCDTKLLWVDGSHPHHIVRCYVEFTASLIQLNAECGDGQLDMNLER                    LRLAVDNLLGRLAENFANPKTQHLFLLNNYDMTISVLKEAGDEANKLQSYFEEKLESN                    MISFADELLMEHFKDLIKFVRSRVSEDLILYTECPSIADVEPIVKNFAVTWKTALELM                    HNEVVTSCSNLLAGMEILKAAMVQLLNDYNRLSECVKIIPGGSTLNRNLVSITSISYE                    MRKYSITL</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
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DNA = <dnaseqindica>429..502#824..881#1318..1413#1679..1780#2309..2392#3009..3089#3633..3776#3923..4014#4703..4784#5523..5705#6065..6180#6260..6318#6895..6995#7755..7805#7893..8072#9017..9151#9233..9307#9595..9652#9740..10041#gtctccttctcggacaagcctcctccactcccggcctcccgatcgatcgcgactagttccaagcagagatcatcagcagcaggtgggggccgaccgccttagctccccctccccgccgcctggttctcatctggcgtggtatgcgttgagattttgagtaatttgcaccgctgtgaccgactagggctttttttttgatgatttttctctgattccgttgatggagaggcgcgatgtgttggggattggggaggagcaccttcctttttacggatgggaaagtaattgcgctatccccattgcgagatttgcaggcattatccccattgcggaatttgcagtggttgtttttttgttgttgttgttgttttgatcatttgttggtacaactaagaggaaatgtgaccgcagcaacttgtagcagcggcatggtggtcgtccatggacagcgggctgaagactcgtttggtgggtttttctccttcgatgaggacgctgccaggtactacaatcccagttgctttggagtaataatatgtattgtagttcactgcaattctagttttacttctttttttttttcaatataaattgcttggaataaattggtgtaaatgaccatacatgcaaaaatgctttaatctccaaagggtaattctgtggagcttatattaatgcatgtaagtggcatttagccttaaggtctatcaccaagagaaatcgattctagtacataattagtacctctttctcctgtaatctacattttctgtagttgaagtttcctctaactgttggctgtttgttggaacaaatataacagtgaggatatgtcattggatggtttggatgaggaacttgaagagcacaaggattatgatgtaagtttaatggcctttgatatttctccatctccatctgagtatgagagataactgtatagttaccatactttggacccggcgagagttaccatactttgctcagtgctcacattagcatgctagcttcagtcgcttgtttctgagtatgagaaatagatgtatagttaccatatgtcctgctggatataaagtacttattgtgtcatccttagatattatttgatcatttgttcctgtagacacatttattagtagccacaccttccaacaaaattatgtgtggtattttaaggtaaagaagttagtaatcctgcaccttgtttattaaatacctaaatttaacccttagctcaatttcaacatacaattccatgaaaattctttttccatatgcaatcatatcaaatacaatattcttctctgtgttctccaggtattgataagtattctagcgaatggtgaaaaacagagagatatggcaaccttggttgaaggcaacctaggccatgctgaacaggatctgattcaagtatgtgtttctgaaatctaagcatgtgtttgtatgtctgtacgtgtgaattgtgacttacttatggctaccttctattcagtaattgtgtgacatatctaaagggaaatgatcgcactatgattacatcactgtttgttttttcaccactgagataaccgaactgtgatatattgcatatttcaattcctcatttatgatcttttatacatggatatttgcatagagacatctatgtcttagatatgtgtctttacttctacaggattatgttgaagatagtgacaacctggtattattgcatgatcagattcatgactgtgacattattttgtcacagataggatcacttcttactggattccaggtatagtcttgattacatgtttagtaagtgtataataaatgaaaaaagagttatttatgtgactaacgctaggtttgtgtggtatgtttttggatatatgaagtccttgtgcatttgtatgataaagcagtgcttcattattttttcaaagatcataaagctagaattgtttagtcaaagttgcctcttaaaactgatagcttgttagtctggtttacttggtcatacttgcgacacatttacataatcatgtttacggcattacactatattatggcctagaatacagggagtcaggaatccaactgtcactaaaatacttctgagtcaaatgccatttcttcacgggttatttcattttccttttgctacactaggaacttctgattgacttgagagagtgccatttctttacggattacttaattttcttttgttatgctaggaaatacaagttcaatggtatctagaatgagcttgccactacaataaaatcactgcaatatgtgttaataattcaccttgcaggttcacattggttccattaactcagaactaagaagtctccaggagagatccttggatataagtgtcagactgaagaaccgcaaggtacgaacaatcctatatgggcaccctaggacaaaatactgtatttcatttgtgaaaaaacacttggtgtcttgggggatggccgtccgcattacaaatatagattgaatccaacatgtttcgatgcttcaaaacttcccaaataaataacgagtattctaatatttaaaaaacctgcaaaaagtcaatttcatattcatcctacatgtaaagatccaaaaagataagttatactgctagtgtatgataaacaatcccaattgattgctttttttttaatatttctgggtatctagagagaattttacattcagtttttgcaggtttgtataaattatgtgtctacactcgcacattttttaggaattatttaatcattgcaacgtgctgaattcgataggggacctgggcacccatgggcacaaagctgcattcattaatttgttgagaataattagctcaggaatagctagaattggcttagaaattcagttgatcttttttgcttagacattgagtaataaactcccggttaagcatatttgatgaattgatgtggtttagctttgatgattgtttgctaaatacaatgtgcttactgagcttaaatgtacagttggttgagacaaagcttgcaaaatttgtcgaagagattgttgctcctcctagtttggtgactgttattatcgatggagaggtaaacattggacaaatgactttgttactgtggttttgcagtatgataggttccatttgaatgttgcttgcataccacaagtagaagtactccttccgtctcaaaatataagggattttggtgggatgtgacatatcttcctgttcagattcataatactaggatgtgtcacatcccacaaaaatcccttatattatgggacggagggagtaatacatagtaaagatagtatcacttgcatattaagcacacagacattttgtcaaaacgtggcatgtaggtaatggctacttgctttaattgtacacgattgtccaaggagcacaatattagcaacatcccttcaatttctagaaagattccatgttatttagttctcatcaaattactgtagttcttccaaattgttgtgtgttgtattatccatttattctgctgttttagatatgcattaaaacgccaggtacttgttcaaaaaggctttatccctgaattgtaaatatgctagttcaaatgacttgttattctagtttatttttccagataaatgatggttatgctaaaagtttggaaattttgagcaaaaagttgagattttctcaagttgatcctatgattaatgcatcaaattctctgaaggatattaaaccagaactggaaaggcttctacaaaaggcattatgcaaggttacctcaggaacacactcttgggttgctttattgtgcccagagttaatagaaatctgtttgcattcatcataatttatgcctgttatgcactgcttacgttatgatgcttctcactcttttttctatctcatttaccttttcaggtgtccgactatctcactgaattattcttttccatgagaaagcctggaactaatatccagatactgcaacaaaatatggttcaaaaatataggtacacacgatgggaactcttcttctagacagacaagtatgaattatcttttgtgctattaaccagtggcggacgcagctttaaaatatagatggtgcagagagcggagatgttcactcaataagagcaatcaaacataatacatatcgtattggtagttcattcacataactgcctcaattttttaggtgttcacactttgttatacctaattttaatggcccattactactataagggggtaagggggtcttgagagtgtggggtgacacgagttgtagctgagtcggtcgacccaccctgcctaatgggtagatccgcccctgctattaacgttgtttccggtcatatgaagaatctcattgacggtcttcaatgcttgtctcatacttttccttttgatagaactgtactgttacaccatggagctttcaagcattttatcctttaattatttaatgagtcattttcatgcttcagatctgaaactaatgggatagtagggaaaacaatctaagataaactcattaaacaaattaaaacagtacaaatgacacctgctgcaatgaatgctaacatttctattgtcgtcaaaatttgttttttttttcagacggtcatatcacagttccctctgcattttttgtttatttactacagaagcaaattgttgctgaaatggtttcaggtatctcatcctctttcttagagagcatggatccaaggtctacactgatgttcgtgcaacatatgctgatacaatgaacaaggtaatgccctgtgattttccacggctacaggaacgggtaaggaatttgactagagtttttcaaaaatcgagatgtctctggtgtcggcttgtgttgttaggtacctggagatcacagatatgttgaacaacattaccttagtggctgcaccactggaagcctggaaaaactagttggagacaaactaagagttcctttgtttttcatgtttttttttgtgtgtgtgtgcattgacttaaaactaaaacttctatgttggtggtttgcatggcagaactgcagctagcctagccatcacttattgtccttctgcaatccctcaatatgttcgctgctcttttctgctttggtatcaatgtgtcaatgaaagtgatgtaaggagacttctaaaagtacaccgtcatctaatctactagtacgatcataagcctgttacaagttggtgaattgttagaactgtgcattcatttgcatcacaacaacatattggattaacgagatcctttggttctaaaattgtagataatcgtgaattccaacatattaaagaaggataatcaaatcagtacttgatgcattacccttgtatcagtgggtaaattggtcatgtctatctgcttctgtcaaatccattgcaatttactagaactttgctgcatcagttgttaagttagttggtcatgatctttgagtcctcagctgttttgcatttgccttcttgtgtttttgtcaaggtaggtgctgagtgcacattttcaagtgtacatagaagcattggagaagctcaagcttgacattggcgtatcaagtgatttgactggatatgacactaatatcattgaccttatatcaaggggaagagagcatttaagaaatcaccgtttcatgttttctttaggtgaacgggcaagcattttgaaggtacatcaatatggtacagtgtatgttgattaacaagtttacctagatgcagacacacgtgttggaatccaagtcagtttcatgtccaatgtaaaaaaaaatagacatatgaaatactactcaaaatacagaatgggtgtcggaaatccgacttgaattcatggtatcctatctggcaaaaaacaatttgtacaagggtatcttggtcacctgggtggaatatttcatcctcatctgtattctatttacagaagctttatgattttttttcaaatgcaaattactgcatcatgctgagctaggcctctgggctttattaaggagttctatttatagatcttgtatgtctcatttttcaggagattgatcgacctggcttggttcctcatatatctgaagtcaatcctgtaaaatacccatatgaagttatttttaggagtatacagaagcttctgatggacactgctagctctgagtagccacttaactgatctgcaatcaaataccgagtatggtcatattactaacagtttccttttaaacatattttccaggtatctttttatcaaggcattctttggtgaagaatcattgttttatcaggtttttcaaggtaaccatttattgtttatgttttgtttgaattttcttaatttgtttagaggagacattttttttatttcattaggggcataagcctcagtggcttctttcaaacattaaacgttctggaaacaccttcccacaaaacagaacagaatcagttaatcaatatatgatgagtaatcataagagtctaaagaaactatataaagaagttttgaacacaaattatataaagaagtaaacaatttgctatatctgaaatacatgcgagccttcattcatttctccctgctcttaggattgattgtctcggtaagaatattgtgcaccaaattgctgaagaaatgttcctgttatttacaatggcacattttcattttatttcatgtttcctacacacaaacaaaaaaactgccaaagtagctttaatgtttctttcaattgactaatttcgaaactgtgcatctgatgttcattatgtccttttctttgctgtgtttcatacttgcattacattttaacaagaaaattagcattatatggcatgtactatagatgatgtggaaaaattacttactttcaggaccttttaaagttattaatggacatttggatcatactcttcgaaattatcatgacgcggtatgcctaatgctcatgatctgcataactaggaaacaccaggtatgaaggcatttgcagttttctcttttatggataaagactgaactacttgataaaaattagtagaagaagacatgcaggatggtctcatgttatgaacttatgatgttactctacccccatcgtaattacatatatcctttggcatccgcctttcatggttcctattagtttgtcttttttactgaaaaccataatcaaaactagattgtgaatataacatggatttgaacttagtattttaaattggcatggtattaagatatccaccaagatggagaaagcgaatagatgatgatcaattctgtagcactcgaaatatattgcttcaatatacaaattcatttgtatatagttctgctattctttataattataggactacatccttcggacaatcaacttggtagagcaaacagaggacttacatttaattcaacttgtaccattaggcaaccaggaagtgccaattgaatgccatttttgctatgaacaaaacattttcttgaagtaacaaattgcgacacaaacattactgttttagtggcacaaattttagttgctataaactccatttcataaataatgaaatcagtgaagcttttgctgtaggacaatgttcctcttgttccctgatttcagttgctaatttacgatgctcaacttttggcaatatgtggattttttgataaattaaatgtatggaatatgatataacatgagtatcccctcccccctctcacgtttttgctatttcagttggttatgttgaacaggcgacttccttgtctagacgcatatttggataaggtgtgtaagctgtaagggagcatcattgtgtcaaaataacttactaactctgttctcaaatttagttctctgctgtgtttgctttaggttctcatctatctctggccacgcttcaagactgtttttgacatgtatcttcaaagcttgtaccggtgtgatacaaaattgttatgggtagatggctcccatccacaccatattgtaaggtgctatgttgagttcacagcatcccttattcaacttaatgctgaatgcggagatggtcaggtcagttgaattacataaacatattgattctgttgtaccattggatcccccaagcgttcttttaatttatgttgatacaagaactgcgtatccaaatattgataaccaagaactgcgatcgaccacgcatagcgggggttgttttggtgctaggctctactcttagtgatttgtgtttgtgtgttagcgcgtggtgcttggacgtgcaccttggtgcactgttgtgttttttcttgtaactttttctgcttcttaatacattcggatggcctccttcggccttcccggtgaaaaaaaaaattgataaccacaatattcatttgatatcaaaatcgttgatcatcaaatttccaatgttactgctatcttaatgaatcacatgcaatttctttgtgtgttcctaataaataataataataataatttttgttccaccatgatctcttgctgacataagttctggattggttgagaaataccaatccaaatatgattcacaatgttccattctgttactggaatttattggtttaaggtattgtctattttttttccagttttctagcattgtggacatatatgatggctggcacaagaaatcatggcacttgtcattagctccttgtaggcatgtgtactaaagtagtgcagatagtttgcaccaaagccaaccacacaatttttttaggagtgccaaatgtcagacaaatggcaaacttattcaaggataagaattttagtacctctgatgcaattcagtaaaatggattttgtatcatagccgtggaatatctttttcagtgcaaacagtaattttggtacagtattttttctgtgcaaacagtagatttttttccaatagcttgtttggttcttctattcttcgaaataatctggatatactccatttttatatgatattaagtatcatattatttatgcagcttgatatgaacttggaacgcttacggctagctgttgataatctacttggtagacttgctgaaaattttgcaaaccccaagacgcaacacttgtttcttctgaataattatgacatgaccatttctgttctgaaggttggtctcttgcctctatcttataaatatacatggcaatccctccagttttggggtgtttactgtagctactaattgcaggaagccggtgatgaagcaaataaactgcaaagctattttgaagagaagctagaaagtaacatgatatcatttgcggtaaacatatcatatcatgccattttttatctgcaactgttgtgtaacagtttattactattgtattgctctagcaggggctagtttaaaccagctcctatggtgaaatcccagctgtactggaacttggttagaaaacaccaaattacaaccagcaaatagctggttatgagttatgacccttttgtgacactatttctaagtttctttttgaaaatattaaatatataaataagaattgatattataatggatttcattttcttacatattttgcttgactacaggatgaattgcttatggagcatttcaaggatttgataaaatttgtgagaagccgtgtctgtaagttgcacaaaactgaagcaagtttatgcaaatgctgtcattcacaagaatatcaagaaaataaaattgtttttcgttctttagctgaagaccttattctttatactgaatgcccaagcattgccgatgttgagccaattgtgaagaacttcgccgtgacatggaaaactgctctagagctcatgcacaatgaagttgtaacttcttgcagtaaccttttagctgggatggagattctaaaagcagcaatggttcagctactcaatgactacaacagactctcagaatgtgtgaagataatcccaggaggatcaactctgaacaggaatctggtttctattacatccatttcatatgagatgaggaaatattcaataacactctagtaattgttatgatgtccaagcaatttttggaacagatgaaaaacaaacagcgctgatagtttcgatccctatcttcacaagcaagagaaaagcgcaacacaaaattatataattttgaacattctgtgctttgttttatggattgtaccttcacggcttcactgaaattttctgatcaaataatacttgacaacaatgatctgcttgcagttt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071446.1 RefSeq:Os10g0488300]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 10]]
 
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[[Category:Chromosome 10]]
 

Latest revision as of 12:47, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information