Difference between revisions of "Os01g0657100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0657100| Description = Similar to Mycorrhiza-inducible inorganic phosphate transporter (Fragment)| Version = NM_001050294.1 GI:115438958 Gen...")
 
 
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{{JaponicaGene|
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The rice '''''Os01g0657100''''' was reported as '''''PT11''''' in 2012 <ref name="ref1" /> by researchers from Switzerland, Denmark, Japan, USA and Philippines.  
GeneName = Os01g0657100|
 
Description = Similar to Mycorrhiza-inducible inorganic phosphate transporter (Fragment)|
 
Version = NM_001050294.1 GI:115438958 GeneID:4324187|
 
Length = 1760 bp|
 
Definition = Oryza sativa Japonica Group Os01g0657100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os01g0657100''''' '''<=>''' '''''OsPT11,PT11,OsPht1;11,PHT1;11'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Function===
|
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* '''''OsPT11''''' is a member of the '''''PHOSPHATE TRANSPORTER1 (PHT1)''''' gene family in rice
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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* The '''''OsPT11''''' lineage of proteins from mono- and dicotyledons is most closely related to homologs from the ancient moss, indicating an early evolutionary origin.
AP = Chromosome 1:28481040..28482799|
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* By contrast, '''''OsPT13''''' arose in the Poaceae, suggesting that grasses acquired a particular strategy for the acquisition of symbiotic Pi.  
CDS = 28481040..28481577,28481670..28482799|
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* Surprisingly, mutations in either '''''OsPT11''''' or '''''OsPT13''''' affected the development of the symbiosis, demonstrating that both genes are important for AM symbiosis.  
GCID = <gbrowseImage1>
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* For symbiotic Pi uptake, however, only '''''PT11''''' is necessary and sufficient.  
name=NC_008394:28481040..28482799
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source=RiceChromosome01
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preset=GeneLocation
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You can also add sub-section(s) at will.
</gbrowseImage1>|
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GSID = <gbrowseImage2>
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==Labs working on this gene==
name=NC_008394:28481040..28482799
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* Department of Plant Molecular Biology, University of Lausanne, CH-1015 Lausanne, Switzerland
source=RiceChromosome01
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* Department of Chemical and Biochemical Engineering, Technical University of Denmark, DK-4000 Roskilde, Denmark
preset=GeneLocation
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* University of Bern, Institute of Plant Sciences, CH-3013, Switzerland
</gbrowseImage2>|
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* National Institute of Agrobiological Sciences, Agronomics Research Center, Tsukuba, Ibaraki 305-8602, Japan
CDNA = <cdnaseq>atggcggacgcggacgggggctcgaacctggcggtgctggacgcgctggactcggcgcgcacgcagatgtaccacatgaaggcgatcgtgatcgccggcatgggcttcttcaccgacgcctacgacctgttctgcatctccacggtgtccaagctgctcggccgtctctactaccagcccgatggctcgacggacagtaagccaggcgctctgtccaagaccgccaacaacatggtcatcggcgtcgcgctcgtcggcacgctcatgggccagcttgtcttcggctacttcggcgacaagctcggccggaagcgcgtctacggcgtcaccctcatcctgatggccgcctgcgccatcggctccggcctgtcgttcggcagctcgcgcaaggcagtcatcggcacgctgtgcttcttccgcttctggctcggcttcggcatcggcggggactacccgctgtcggccaccatcatgtccgagtactcaaacaagaagacgcgcggcgcgttcatcgccgcggtgttcgccatgcagggcgtcggcatcatcttcgcggggctcgtgtccatgatcgtctctagcatcttcctcacctacaacaaggcgccgtcgtacaaggggaaccatgacctctcgaggcagatgcccgcggctgactacgtgtggcgcatcgtcctgatgatcggcgcgttcccggcgttggcgaccttctactggcggatgaagatgccggagacggcgaggtacacggcgatcatcgatggcaacgcgaagcaggcggcgaacgacatgcagaaggtgctgtcgatcgagatagaggccgagcaggagaagctggccaagttcaacgcggccaacaactacccgctcctgtcgatggagttcgcccggcgccacggcctgcacctcatcggcacgacgaccacgtggttcctccttgacatcgccttctacagccagaacctgacccagaaggacatcttcccggctatgggcctgatcagcggcgctgccgaagtcaacgctctcacggagatgttccagatatccaaggcctcgttcctcgtcgctctcctcggcaccttccccggctactgggtcaccgtcgctctcatcgacaagatgggcaggtacatgatccagctgatcggtttcttcatgatgtccatgttcatgctggcgatgggcatcctgtacgactacctcaaaacccatcacttcctgttcgggctcctgtacgcgctcactttcttcttcgccaacttcgggccgaacagcaccaccttcgtgctgccggccgagctgttcccgacgcgcgtgcgctccacctgccacgccatcagtgccgcggcgggcaaggccggcgccatcgtcgcggccttcggcattcagaagctcacgtacaactctcaagtcaaaagcatcaagaaggcgctcatcatcctctccatcaccaacatgctcggcttcttcttcacgttcctcgtcccggagaccatgggtcggtcgctcgaggagatctccggcgaggacggcaacaccggcgccggtggcggcggcgcccctgccgctgccaatgccggcgttggcgtgagcgcttcggatgtgagcagggacgagaagttccctgcttcaagcaccgaatggcagacatccatgcacgcatga</cdnaseq>|
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* Department of Plant Biology and Plant Sciences, University of California, Davis, California 95616
AA = <aaseq>MADADGGSNLAVLDALDSARTQMYHMKAIVIAGMGFFTDAYDLF                    CISTVSKLLGRLYYQPDGSTDSKPGALSKTANNMVIGVALVGTLMGQLVFGYFGDKLG                    RKRVYGVTLILMAACAIGSGLSFGSSRKAVIGTLCFFRFWLGFGIGGDYPLSATIMSE                    YSNKKTRGAFIAAVFAMQGVGIIFAGLVSMIVSSIFLTYNKAPSYKGNHDLSRQMPAA                    DYVWRIVLMIGAFPALATFYWRMKMPETARYTAIIDGNAKQAANDMQKVLSIEIEAEQ                    EKLAKFNAANNYPLLSMEFARRHGLHLIGTTTTWFLLDIAFYSQNLTQKDIFPAMGLI                    SGAAEVNALTEMFQISKASFLVALLGTFPGYWVTVALIDKMGRYMIQLIGFFMMSMFM                    LAMGILYDYLKTHHFLFGLLYALTFFFANFGPNSTTFVLPAELFPTRVRSTCHAISAA                    AGKAGAIVAAFGIQKLTYNSQVKSIKKALIILSITNMLGFFFTFLVPETMGRSLEEIS                    GEDGNTGAGGGGAPAAANAGVGVSASDVSRDEKFPASSTEWQTSMHA</aaseq>|
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* Department of Ecology and Evolution, University of Lausanne, CH-1015 Lausanne, Switzerland
DNA = <dnaseqindica>1223..1760#1..1130#atggcggacgcggacgggggctcgaacctggcggtgctggacgcgctggactcggcgcgcacgcagatgtaccacatgaaggcgatcgtgatcgccggcatgggcttcttcaccgacgcctacgacctgttctgcatctccacggtgtccaagctgctcggccgtctctactaccagcccgatggctcgacggacagtaagccaggcgctctgtccaagaccgccaacaacatggtcatcggcgtcgcgctcgtcggcacgctcatgggccagcttgtcttcggctacttcggcgacaagctcggccggaagcgcgtctacggcgtcaccctcatcctgatggccgcctgcgccatcggctccggcctgtcgttcggcagctcgcgcaaggcagtcatcggcacgctgtgcttcttccgcttctggctcggcttcggcatcggcggggactacccgctgtcggccaccatcatgtccgagtactcaaacaagaagacgcgcggcgcgttcatcgccgcggtgttcgccatgcagggcgtcggcatcatcttcgcggggctcgtgtccatgatcgtctctagcatcttcctcacctacaacaaggcgccgtcgtacaaggggaaccatgacctctcgaggcagatgcccgcggctgactacgtgtggcgcatcgtcctgatgatcggcgcgttcccggcgttggcgaccttctactggcggatgaagatgccggagacggcgaggtacacggcgatcatcgatggcaacgcgaagcaggcggcgaacgacatgcagaaggtgctgtcgatcgagatagaggccgagcaggagaagctggccaagttcaacgcggccaacaactacccgctcctgtcgatggagttcgcccggcgccacggcctgcacctcatcggcacgacgaccacgtggttcctccttgacatcgccttctacagccagaacctgacccagaaggacatcttcccggctatgggcctgatcagcggcgctgccgaagtcaacgctctcacggagatgttccagatatccaaggcctcgttcctcgtcgctctcctcggcaccttccccggctactgggtcaccgtcgctctcatcgacaagatgggcaggtacgtacgaaccgtataaacatggacacttgatgcaaatgcaatcgatgcgaacatacacgaaatgaatgaattcatggtcacatatgcaggtacatgatccagctgatcggtttcttcatgatgtccatgttcatgctggcgatgggcatcctgtacgactacctcaaaacccatcacttcctgttcgggctcctgtacgcgctcactttcttcttcgccaacttcgggccgaacagcaccaccttcgtgctgccggccgagctgttcccgacgcgcgtgcgctccacctgccacgccatcagtgccgcggcgggcaaggccggcgccatcgtcgcggccttcggcattcagaagctcacgtacaactctcaagtcaaaagcatcaagaaggcgctcatcatcctctccatcaccaacatgctcggcttcttcttcacgttcctcgtcccggagaccatgggtcggtcgctcgaggagatctccggcgaggacggcaacaccggcgccggtggcggcggcgcccctgccgctgccaatgccggcgttggcgtgagcgcttcggatgtgagcagggacgagaagttccctgcttcaagcaccgaatggcagacatccatgcacgcatga</dnaseqindica>|
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* Plant Breeding, Genetics, and Biotechnology Division, International Rice Research Institute, Metro, Manila, 1301 Philippines
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050294.1 RefSeq:Os01g0657100]|
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}}
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==References==
[[Category:Genes]]
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<references>
[[Category:Japonica mRNA]]
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* <ref name="ref1">
[[Category:Oryza Sativa Japonica Group]]
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Yang SY, Grønlund M, Jakobsen I, Grotemeyer MS, Rentsch D, Miyao A, Hirochika
[[Category:Japonica Genes]]
+
H, Kumar CS, Sundaresan V, Salamin N, Catausan S, Mattes N, Heuer S, Paszkowski
[[Category:Japonica Chromosome 1]]
+
U. Nonredundant regulation of rice arbuscular mycorrhizal symbiosis by two
[[Category:Chromosome 1]]
+
members of the phosphate transporter1 gene family. Plant Cell. 2012
 +
Oct;24(10):4236-51. doi: 10.1105/tpc.112.104901. PubMed PMID: 23073651; PubMed
 +
Central PMCID: PMC3517247.
 +
</ref>
 +
</references>
 +
 
 +
==Structured Information==
 +
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]

Latest revision as of 13:37, 28 October 2016

The rice Os01g0657100 was reported as PT11 in 2012 [1] by researchers from Switzerland, Denmark, Japan, USA and Philippines.

Annotated Information

Gene Symbol

  • Os01g0657100 <=> OsPT11,PT11,OsPht1;11,PHT1;11

Function

  • OsPT11 is a member of the PHOSPHATE TRANSPORTER1 (PHT1) gene family in rice
  • The OsPT11 lineage of proteins from mono- and dicotyledons is most closely related to homologs from the ancient moss, indicating an early evolutionary origin.
  • By contrast, OsPT13 arose in the Poaceae, suggesting that grasses acquired a particular strategy for the acquisition of symbiotic Pi.
  • Surprisingly, mutations in either OsPT11 or OsPT13 affected the development of the symbiosis, demonstrating that both genes are important for AM symbiosis.
  • For symbiotic Pi uptake, however, only PT11 is necessary and sufficient.


You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Plant Molecular Biology, University of Lausanne, CH-1015 Lausanne, Switzerland
  • Department of Chemical and Biochemical Engineering, Technical University of Denmark, DK-4000 Roskilde, Denmark
  • University of Bern, Institute of Plant Sciences, CH-3013, Switzerland
  • National Institute of Agrobiological Sciences, Agronomics Research Center, Tsukuba, Ibaraki 305-8602, Japan
  • Department of Plant Biology and Plant Sciences, University of California, Davis, California 95616
  • Department of Ecology and Evolution, University of Lausanne, CH-1015 Lausanne, Switzerland
  • Plant Breeding, Genetics, and Biotechnology Division, International Rice Research Institute, Metro, Manila, 1301 Philippines

References

  1. Yang SY, Grønlund M, Jakobsen I, Grotemeyer MS, Rentsch D, Miyao A, Hirochika H, Kumar CS, Sundaresan V, Salamin N, Catausan S, Mattes N, Heuer S, Paszkowski U. Nonredundant regulation of rice arbuscular mycorrhizal symbiosis by two members of the phosphate transporter1 gene family. Plant Cell. 2012 Oct;24(10):4236-51. doi: 10.1105/tpc.112.104901. PubMed PMID: 23073651; PubMed Central PMCID: PMC3517247.

Structured Information