Difference between revisions of "Os01g0691600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0691600| Description = Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2)| Versio...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0691600|
 
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Description = Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2)|
 
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Version = NM_001050471.1 GI:115439312 GeneID:4325640|
 
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Length = 8162 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0691600, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:30301430..30309591|
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CDS = 30301539..30301554,30301661..30301771,30301899..30302067,30303429..30303651,30303736..30303792<br>,30304306..30304449,30304527..30304607,30305614..30305701,30306167..30306504<br>,30306599..30306674,30306762..30306955,30307434..30307597,30307668..30307749<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:30301430..30309591
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:30301430..30309591
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggccggcggcgacggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccgtcgaggtcgattgacgagaccgccgaactggactacaccgatgacgtcgatgacgacgtccgcgatgccgatagggaggtgaagaagagggacttcaccaagctagagctgaagccggatcacgcgaacaggccgctctgggcctgcgccgatggccgcatcttcctggagacgttttcgcccctatacaaacaagcctacgatttcttgatcgctattgcggagcctgtttgcaggccagaatccatgcacgagtacaatctaacaccccactcactatatgctgcggtctcagttgggcttgagactagcactataatcagtgtcatgagcaagctctccaagactaaactgcctcgtgaaataattgattttatccatgcatcaactgccaattatggtaaagtgaagcttgttctgaagaagaatcgatattttgtggagtctccattccctgaggttttgaagacgcttctgaaagatgatatcatttgcagagcacggatatctcctgaggattccgttggggcaccttcatttactattagcaaaacagctggtgaaatggctagtggccatgaggacttattagatggaatggaactggctgctgcaactgaagacaaggaaacacattcttttgaaattgatccttctcaggttgagaatgtgaagcagcgttgcttgccaaatgcactgaacttccccatgctggaggagtacgattttagaaacgacacagtgaatccagatttggagatggaattaaagccccaggcacgcccaaggccatatcaagaaaagagcctcagcaagatgtttgggaatggcagagcaaggtcaggcattattgtgttaccttgtggtgctggcaagtccttggttggtgtatctgctgcatgtcgtatcaagaagagttgtctatgtttggccacaaatgctgtatcagttgatcaatgggcatttcagttcaagctttggtcaactataaaagatgaacatatcagccgttttacatcagataacaaggagaaattccgtggaatggccggtgtagttgtgactacatataacatggttgcatttggaggtaaacggtctgaagactctgagaagataattgaagaaattcgaaatagggagtggggcttgctcctaatggatgaggtccatgttgttcctgcacatatgttcagaaaggtcatcagcattacaaaatctcactgcaagcttggtcttactgctacacttgtgagagaggatgaacgcatcactgatttaaattttcttattggaccaaagctgtatgaagcaaactggttggatttagtgaaaggtggatttattgcaaatgtgcagtgtgccgaagtttggtgtcccatgaccaaagagttctttgctgagtatttgaaaaaagaaaattcaaagaagaagcaggtcctctatgcgatgaacccaaacaaattcagagcttgcgagtttctaattcgattccatgagcaacaacgtggggacaagataattgtgtttgccgataatctatttgcactaactagctacgcaatgaagctccgtaaaccaatgatttatggttccacaagccatgttgagaggacgagaattctgcatcaattcaagaacagctcagatgtgaatacaattttcctttcaaaggtgcagtaa</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MAGGDGDRARAPKRHKSSAPSRSIDETAELDYTDDVDDDVRDAD                    REVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPES                    MHEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVL                    KKNRYFVESPFPEVLKTLLKDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLD                    GMELAAATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMEL                    KPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNA                    VSVDQWAFQFKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEK                    IIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFL                    IGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQVLYAMNPNK                    FRACEFLIRFHEQQRGDKIIVFADNLFALTSYAMKLRKPMIYGSTSHVERTRILHQFK                    NSSDVNTIFLSKVQ</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>110..125#232..342#470..638#2000..2222#2307..2363#2877..3020#3098..3178#4185..4272#4738..5075#5170..5245#5333..5526#6005..6168#6239..6320#ggcgacgagaagacgaaactgccccgtgcgccgccaacatctcccctctccggctaccgccgccaccgcgccgccgcgctcctcgctcctcgctccagggcttccggccatggccggcggcgacggtgaggaagcaaaccctaagcggcaccatccccggcaccggcgcccccccgttctgtcctatataccgcatctcccttacaccgttcccccctctcccctctgcaggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccgtcgaggtcgattgacgagaccgccgaactggactacaccgatgacgtcgatgacgacgtccgcgatggtaacaccgcgcgctcgaatccgccctaaactcaccgcccctcccccaatgtatgagggtttgcacggaacattgaactgattggggatttttgttttgtgggggttggaactttgattcggtgcagccgatagggaggtgaagaagagggacttcaccaagctagagctgaagccggatcacgcgaacaggccgctctgggcctgcgccgatggccgcatcttcctggagacgttttcgcccctatacaaacaagcctacgatttcttgatcgctattgcggagcctgtttgcaggtcaacttcagtcacctctagcctcaacattaaccttagtaccttaattgcatagtaggtttggactttcctgagactgaaattgcatccaccaagtggagtttagtccaaatctcaatatcttatacacttagaagccactaagttattgttaattctctcttatcttgtgaagtcacatcatctcaactgtttttagtttttttttcctttttgtggtttatcaaaggttcagattgtgctcaagcacaaagcaaaacctcctagctacaaaacaaaccacctcacatttcatgtttagcattttggtatgcaaatttcctgcagcattcatggggttccatctatgtggttgatttcccccaaaattagcatggtttcagcattcatgttggaataggcttgtttttgtcatgcagtgaaacagaagttgaatttagtgatattatcttcattgagagctgtggggatcatatcatattctgagggtttcactactttatcttttagggactttggtactgccatgtgattactcaatttgattttctgtgaaccacttggatataatttgtttagaataggttaatttgtttggaatttgaggggaaaaccaatggtttgtaatggaactaaccatgtattacttgaaaatggtgagcacagctatgtgataggcatatcattgtgccattagattgtttgaatagatttaatatgccccatgtggctatctagaacctagaaagtatactgacatatataagttgcaaccaagttgatgaccccagcatgacttcaagagagcataaccattccgttgttactgtcaaagtaaattctagccttctaggattctttagtttgagtgatgggatggtgggttaaggagattattagtcctttttttcttaagttaagatgggactgagtttgacctgaagtctttctgcaaaacaaaatgatgcctatactccgatggacgagatgatcaaattggtcgtcttttttatttgaacttcttttgaaatactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatctcatacatttgcataaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaatggagggagtatatgtgcatggttgagtgcctgaaatgtattactttgtcaaagggtttctgattttccgttaaactatttgattttgacctttggtggtgcaggccagaatccatgcacgagtacaatctaacaccccactcactatatgctgcggtctcagttgggcttgagactagcactataatcagtgtcatgagcaagctctccaagactaaactgcctcgtgaaataattgattttatccatgcatcaactgccaattatggtaaagtgaagcttgttctgaagaagaatcgatattttgtggagtctccattccctgaggtcataccatacttccgtgattaaaaaatattcttttttgtctattattttctatttatgtgagctgcgatatctcatctccaggttttgaagacgcttctgaaagatgatatcatttgcagagcacggatatctcctgaggttattcatctgttttgtgcacttgaatagaattcttatggcaatatactagtagcaaagtcgtgccttcctacccattatcttatgcgagctctagtctgtctggtgttactacattgtctgcgtgaaaccatcgtgtaacttctatcaatgcaagctgatttctatgttgttatctaaggccctgtttgattcagcttaggattattataatctggattattaggagtaagctgaaacaaacaagtagattattatgatagattattataatctgtaagccatattactataatctaataatctcctctggaggagctttttccagattattgggtggctaaagacccactaccctcagatgccttcaataatctagagaaacaaacaactcgcagcttattttatgttagcttattataatctagcttagagtaatccaatttaataatctagattacaataattttaagctgaaacaaacagggcctaagtccattctaatttatccaggattccgttggggcaccttcatttactattagcaaaacagctggtgaaatggctagtggccatgaggacttattagatggaatggaactggctgctgcaactgaagacaaggaaacacattcttttgaaattgatccttctcaggtcatgcatttacttcaattagaatctcacgaaaaattttcggtgatggagactgatgtttaattcatgtcatgcaggttgagaatgtgaagcagcgttgcttgccaaatgcactgaacttccccatgctggaggagtacgattttagaaacgacacagtaagttctttgcatatcaagagacatgcataatttttagtccgtataatcatattgtccatgcaattggtctgtattgaaccagagaaaaccacaatgggggctgacccaactttgcctcgtcaaaattttaaaaaacaatttttacctttgcacccatggaatttctcccaccaccacttctgctatacaagatattgtacataccaattcaatgggggctagttctttttttgctacaccaaacataaatgctataagcaaaacaaaaacttctaagcaatagaagtgtttatttactgtattgttatctctagacattgcacagcgatgtattaatagagaagatccaacttcatatatatggataatgaaaagtaagcttttagattgcagaatcacagatgttcaggcttagtttggtggtgctgaaaacaactaacacatgttttctgatgtatatagtgcagctaaacatattattctaaaagaagggtagtccaatattgaaatcaaagaatgattcgaaatctggagcatcggaacacatctttaggagcccagcagaatgagcatatatacctcagaaatgaattccatgtcaaaatcaattaatatttttggtacattacatgacagctctcattagtgtatactgtaaaaaaactctcattagtgtgcaaagcctttttttttaattaaatccatatataagagtaagagaaaaaacagttcattaagctttgcttagagcattttctgttttttagcatttcgtttttggtaaaacttgtatatccaacacagcacaactagatacgacatcgttgaccctatttccacttgaaaactgtggtattcttaagaatcaaaatatatttacttcttatgttagtaggaaccttacagtattaccattttgtggttatgcagctgtttaggggcatgaccatgtacatatatttgctatattattcagaattaaaatctgatgtcttaattgtaggtgaatccagatttggagatggaattaaagccccaggcacgcccaaggccatatcaagaaaagagcctcagcaagatgtttgggaatggtaactttattatgcaatttgcacatgaatattgaatttgtaaatttgaacaactggtaaataactgcaaaccgatatgaagtttgggaacgttaattttcaaatgactttgagtctttaagtatgctgtttccttgccggttttacctaatcacgtactgattcacatccagatctaatgacagaacaaacgcgtagtgttacagtaataagaaaattagaatatcctagtaaaaatgttgtcagtattgtttgaagtgtaggaactaaagggatgtggtggggaactgtgtttaccaagagtgaaaactaaaattgctagtggcagtcctcttgcttgtgtcgttaattagcaatttattcccttcatttgctatttttcacttcaaattttcattaacttacaaggacttaacagattatatgcttctttcctcattgaatattttttttatgattttacaggcagagcaaggtcaggcattattgtgttaccttgtggtgctggcaagtccttggttggtgtatctgctgcatgtcgtatcaagaagagttgtctatgtttggccacaaatgctgtatcagttgatcaatgggcatttcagttcaagctttggtcaactataaaagatgaacatatcagccgttttacatcagataacaaggagaaattccgtggaatggccggtgtagttgtgactacatataacatggttgcatttggaggtaaacggtctgaagactctgagaagataattgaagaaattcgaaatagggagtggggcttgctcctaatggatgaggtgggatatccattagtgatatttgaggtgtttaatattaaatatttcaggtcttcacacatgtccatgttcttctttttatttgtgtttgcaggtccatgttgttcctgcacatatgttcagaaaggtcatcagcattacaaaatctcactgcaagcttggtcttactggtcagtttcgatttatatccctacatatgattttaccattcacttttatgtaggtattctaagtaactcagattactgtaactgcagctacacttgtgagagaggatgaacgcatcactgatttaaattttcttattggaccaaagctgtatgaagcaaactggttggatttagtgaaaggtggatttattgcaaatgtgcagtgtgccgaagtttggtgtcccatgaccaaagagttctttgctgagtatttgaaaaaagaaaattcaaagaagaagcaggtgaatctttattgaagttcctcgatatgccttttccatattaagattcatgtctttatttttgcaatataaagtccacatgttccaatttctagtatagctttttgtgatactccttccatttagaatgtaaaatgttttgctattgttattagtcaaaacttctttaagtttgactaagttcataaataactaaagacgtagctatattttcaacaccaaacaaataatattataaaattatattcaattgtggatttaatgaaattaatttggcattgtgaatcttattacattttttctatatataaacttgatcaaacttggagaagtttgacttaggagaaaaccaaatcatcttacattaaaatgttggttttcttgtgctttgtacatgccagacatgaatttattggtcaatgtgcttgtttatcaaatcttgtcatcttcgaggattgcactaaccctggcctatcaggtcctctatgcgatgaacccaaacaaattcagagcttgcgagtttctaattcgattccatgagcaacaacgtggggacaagataattgtgtttgccgataatctatttgcactaactagctacgcaatgaagctccgtaaaccaatgatttatggttccacaaggtgattctcattttatacagatgtttgtgttccattagttatatgcttatatctgcttgaaaacattcagccatgttgagaggacgagaattctgcatcaattcaagaacagctcagatgtgaatacaattttcctttcaaaggtgcagtaactgatattctgattcaaaacatacttttgtaaattcaaccatcatcatcttaactgcatatctactgtcacttaggtgggtgataactcgattgatattccagaagcaaatgtgatcatacaaatttcatctcatgctggttcacggcgtcaagaagctcaacggttgggacgtattctcagggcaaaggtaaaatggattgaatctgatgattagttcatggaacagaatgatgttaccatgatacttctctttgtatctaaaattcatcataaaatgttaatgctttttatataataaggattagtgagaaaaataaaatgcatgatggatcaaactaatattgttcttatataattctggctgaagatatcaagcatgctcacatttgcttaaatgtttttaaagcttgttggaatctgtaactatttaatttgattttagtatacaagttatatatgtaataatttattatcgtgttgtaaatacagctctggaatctgaaagaatagttttgtgtaaaattagttgcagtatgttatatgctagttatgactaaggaatcacgtgtccaatcagatgatggaagcattagatctcaaactgctgcagtcatgttctaagataatactttctattgaaatgtcattggatcttgataattactgtgacatcagggtaagcatcaagacaggatggctggtggaaaagaagaatacaatgcgttcttctactctcttgtatcgactgacactcaggtgagtctcaccactgtgtctcttttggcatatcaattttcttgtttgtgaaatccaccaacaatggcgatttgtcaaaagtcaaaactgtatatgaccatgactttttttttattcatgcaggagatgtactactcaactaaaaggcaacaatttcttattgaccagggatatagcttcaaggtaaacttgcgagcttctatatgttgaaaaaaatcgattgtttggcttgattcctactgtaacatttcatttaccaggtgatcaccagcttgccgccacctgaagaattacctaacctgaaatattacacacttaatgatcagcttgaacttttggcacaagtaggtgttttctgtacctgttgtttgtaagctgctacttctttatttctaattgtgcaagcttgcttgtaaactcacttcgccacttaaaccagttgctgagtgcaagggatgacatgattggcattgagcacttggaagaggattctgatggcaaggctcttatgaaagcacggcgatctgctggatcaatgagtgccttttctggatcggggggaatggtctacatggagtacaggtgcttcttctttccgcttatatttcgtttttacgtcaattatttgatttcattattctatttactcaattctaacttgtgagctcttttcatccagcactggtaaggggaaggctggagcttccaagaaaccgaaggacccttcaaagaggcattacctgtttaagaagcgttatcaatgatcttgataaccggcgttgtttccttcctttgcctatctcatctgcaaaaatactgaatacgagttatggttaaggaattccaatgattaacgtggagtgggggaggttcccattagcgcatcgaccagcatttttgttaacttgccgagatatttgcatcaacatccaacggcaataagcacttatttggtcgcacgcccttgtgtttgctaatgagaaaaaacttggcatttgccttggtcctgaagatgtaaatactgttgatgcaaatacttctgtaaggcttatatgacatctagttattttccggacgtgaacgc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050471.1 RefSeq:Os01g0691600]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:53, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information