Difference between revisions of "Os01g0709500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0709500| Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)| Version = NM_001050569...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0709500|
 
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Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)|
 
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Version = NM_001050569.1 GI:115439508 GeneID:4327824|
 
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Length = 9233 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0709500, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:31239107..31248339|
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CDS = 31239480..31240104,31240188..31240431,31240901..31241302,31241954..31242208,31242700..31243071<br>,31243182..31243286,31243752..31243959|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:31239107..31248339
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:31239107..31248339
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgtttgctgcaggatcctttcctgtcataagccctactccacataaagctgataatgcttctgcgacgaaacatggacgttctggcttacaccatagtcctgcacctgcacctgtaggcttgcctccatctgaaggaaatgcacgaggaaatcctgcgtatgcaccacgtcatccccatgaatatcactcgccttcaaattctccagaacctggtctaccacctgtgaatccgcccgacagtcatgcatttaaaaagcccaagagtttggcaccagcaccccaatcatttccgccaccgcctccgagttcatattgcatggcgttaaattgtcaagatcctctgaccaatagtctccctggaactacatgtctttgtgtgtggccaataaaagttgagcttcgtttaggtatagctttgtacacattctttgcattggtatcagaacttgcacaagatattgcatctggagtgctcatgaaacaaagtcaagttcgtgtaatgggagcaaatgctgcaactgaggacccagagaaaacagttgtccttattgatcttgtgccactgggagaaaaatttgacaaggcaacagcacttttagtatttgaaaggttttggcacaagcaggtcaacataaactctatgcattttggaaactatgatgtgttatatgttacctaccaaggtcttcctccgtcgccaccaacagctcccaggatgaacaatggtcttagcaatgttaatgatccaaggttgcatccacttgctgttgatgtgggaaaccacagagaaacaaaaagcaggggcataattgttataattgttctttcaagtgtctttgcttttattttatgttctggagctgcgttggtaatttgtttcaagattagaaaccgcaaccatttaactgaagagtcacctatgccaccgaagcctgcaggtcctgggtctgcagttgttgggagcaggctaggaagcagacctatttcagcatctccatctttcagctcaagcatagtgacatataaagggacagcgaaaacatttagcttgattgagatggaaagagctacacaaagatttgacaactccagaattattggcgagggtggttttggacgtgtttatgaaggtattcttgaggatggagaacgggttgctgtcaaaattcttaagagggacgaccagcaagttacacgggaatttttagctgagcttgagatgcttagccgattgcatcacagaaacctggttaagttgataggtatatgcacagaagaacatatccggtgtcttgtgtatgagcttgttccaaatggtagtgtggaatctcacttgcacggatcagataagggaactgctccacttgattgggatgctaggcttaaaattgcacttggtgctgcacgtgctcttgcttatttgcatgaagattctagtccccgtgtcatacaccgtgacttcaagtcaagtaacatcttattggaacatgacttcacccccaaggtgtcagactttggcctagcaagaacagccataggtgaggggaatgagcatatttcaactcgtgttatgggaactttcgggtatgttgctcctgaatacgcaatgactgggcatcttctagtaaagagtgatgtctacagctatggtgtcgtcctccttgagcttcttaccggaaggaaaccggtggatattttgagacctccagggcaagaaaatttagttgcatgggcttgtccttttcttactagcagagatggcttggaaacaataattgatccatcacttggaaatagcatcctattcgatagcattgcaaaagtagcagctattgcttctatgtgcgtgcagcctgaggtggatcagcgcccatttatgggtgaagttgttcaagctttgaagttggtatgcgatgaaggcagcgagttcaatgaatcaggaagtttcagccaagatttacatattcaggattctgggattataagtagagcaagcctggatgtggacgtagaacctgttgtatctgctgagctgttcaatgcatcagcacattatgacactcttgatgcatctggttcttttcgacgatattcaagttcaggtcctcttagggtaggtagaaccgggcacaatagggagaggggtttatcaactggtagctcaagcgagcactgtggtacacaaagattcaggatagattcagagtag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MFAAGSFPVISPTPHKADNASATKHGRSGLHHSPAPAPVGLPPS                    EGNARGNPAYAPRHPHEYHSPSNSPEPGLPPVNPPDSHAFKKPKSLAPAPQSFPPPPP                    SSYCMALNCQDPLTNSLPGTTCLCVWPIKVELRLGIALYTFFALVSELAQDIASGVLM                    KQSQVRVMGANAATEDPEKTVVLIDLVPLGEKFDKATALLVFERFWHKQVNINSMHFG                    NYDVLYVTYQGLPPSPPTAPRMNNGLSNVNDPRLHPLAVDVGNHRETKSRGIIVIIVL                    SSVFAFILCSGAALVICFKIRNRNHLTEESPMPPKPAGPGSAVVGSRLGSRPISASPS                    FSSSIVTYKGTAKTFSLIEMERATQRFDNSRIIGEGGFGRVYEGILEDGERVAVKILK                    RDDQQVTREFLAELEMLSRLHHRNLVKLIGICTEEHIRCLVYELVPNGSVESHLHGSD                    KGTAPLDWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL                    ARTAIGEGNEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDI                    LRPPGQENLVAWACPFLTSRDGLETIIDPSLGNSILFDSIAKVAAIASMCVQPEVDQR                    PFMGEVVQALKLVCDEGSEFNESGSFSQDLHIQDSGIISRASLDVDVEPVVSAELFNA                    SAHYDTLDASGSFRRYSSSGPLRVGRTGHNRERGLSTGSSSEHCGTQRFRIDSE</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>8236..8860#7909..8152#7038..7439#6132..6386#5269..5640#5054..5158#4381..4588#gccacaagtccaccgcagcacggcgccctctcctctcctctcctccgtctcccgcctgccgcgaaaccaaacctcgaaaataaaaccaacagtttccctcgcggccgcgcgcggagacgagtagacgacagcgaatcgctgccggtttggggcgcgcgcggatcgcggcggagggaggcaagcctttcggtttggtccgccaccaccaccacggccaccgcgcctccgcctcagcgtccgcgatttttttttttatcttttggttttggatttccccttgtcaaaactggcaggattcttctgcctgcccgagcctgactactgttgggttcgtgctcgctgctcccccacgttttgttttactagtcgccgccgcaccgaatatttttcccacctcgctcgccacgccgccgacacccgccgtccgcttccgcggctgccccgcgcgccggtgctgtgtcgccgggctgcggcggaggagtgccgaccttttcctccggggtgaatgagagagatgtgatcgtggcgaatcccgagctctgccgctgggctgggaggcggggaagggaggacaggagatggggcggcgtggaggaggaggacgagcgggaggcgcgtggattggtggctgtgtacttgcgctcgccgccaccttggtcgtctgcgtgctcgtgatccgtggagctggaggtatgtgcagtggtgtgctctgtgctgtgctggtctgctctgtgggagttttgggggcctccttgttggtctagtttggccaggatcatgcagttccgatcctgaatgctagagtggtttgcttgttagatttttgggttttgagctgccagaacccgagcctgcagcggaagtttcgtactattattaagttttttcacttgggtctctgattcttcgaattggatgggtgattgatgttgaggttgaggacgttgttgtgatttgatgggtgccctgattgtaacatctgctaggatcacagaatattgcagggtctgaagaacatcgccctcttaagcatacgagaaggaataagatggcacgtgtaaattagaaatacagatgcctcaattctatgcacctaaaatttgggggcaggggcgagtgttatgtccatttcgttagctaccttttttatttcctatgacaaatagagtgtttagctgcaaaataaactactgaagcttatttttcagaaggggcataagacagacaaattcaaatggacaaacttttagaacataaatctcggacaaatgctgtaactttgcatgcactatatatgtcaactgataatattttcagttttagttgccatcttattagtttttaacccaaaaatacaatgatcatggacatcactgatcatttttgaccagtcgtattttttgttagcaattcattgttaagttattgcccttgaacaaagctcttgccacttttatattacatttaagctccaaagacaacccattcgttctattatattttggtttctggattatggcttgctatgctgacaaattgttagctattctgttcatgttttgttttcaaaggtttgaagcaatatcatgctcctgccttcgctcgaaaaattcttctttccataacaagcggacatccacaagataacttgaatattgtacttcatccgtcacagttacaaaccccaagactccaaagcttaggtctgaaagttaatggacctataccctgagatgctttcatttttgtttatcatgtcatgtattctgaactatatgcaacttaccatatttattattttctaggactaaatgtaaaaccacctgcagcaactagcagacgtgttaacgtacagcaggaactatatgcaccaagcccaacgatcagccacagaggtacattcagaattatgatttggtttgttatcctatatatatctataaagttcatcgccactaagtgtagtcaatgctatttctctcctctcattaagtcacatcacctcaattatttctagcccttgatgattgatctatggtccaaattatcttcctccttttcttctcttatataaagtcatatcaccttagttttgcctttggatgactaatctatattaccttctttcttttccttctctcatcgagccacatcaccttagttttgtttttgaatgatcaatccatatatgattaaaatttttataaaccatatcatctcaattgtttgtagcttttttattagtcgatcaaagatgaaaattatacaaaatgtagctatattacatgttatttctactaatatcacacaaaactcccgcagcaatgcatagggtttcatctagtttcttgaaattatgttgagaaaaattgttacgttggttttccctgaaagtcgtgtattctaccctagtgggttgctttgcacagatggcttatctcactgtctagtgtctaagcaaactttttttttaaataaaggaagctttatagatctcaaacaattacattgatacaattaatctaggaccactcctggcctctgtataactaattaggatgcgcacgacctataattattgcaaaaaaaaaaagcttcattcaccaccatagcaacacttggaccgtgagaaaggccctccaaaagcgatgcctccaaaagggaatggcaaactaagcaaactgtgctgcctacaatacaacctagtgctccctgtcattcttattagtctccaatcagagaaatatccccatgtatcgagagtccaggccaattgttggttagcttgatgttgaattctatctgcatcaatgttactgtcaaatctaggttgaaaatgatgaaacctttttgcttattcataggccaatctaccctaccttcacatatgatttttccaagttacagtcaaatctaggttgaaatgttttatatctctatcctctccgtaaggcatgcaaccaataagtttgttgtagaaataataataaaaaaagagacataaggtgatgggggcaaaccagcaaacccccaactccctttattattgactagcgttaataatagaatcacatagattctagccaataatcctaaggttactatgccacccataatggaatgaaagacccttgcctactgattcctgctcccctgtggtagcctcatagaccaaaagtagagccagtaggaagtcatctgttatgaatatagcttatattgaataatagccctaaggaggcaatatataggagtacaagagagcgtatatagaaacctatatatgtacaagactatattccttaacaacatgaacaaaacctgtgtaggattagacacttttttgctctagctaatgaaatttcattgcaagattgttataagcaaacaatcatatctattaatgcattccaaaaatagttcttttatgatccactgaaggtaccttctagtgttaacttttgtacttcttgatactccccaaggacataaaaagaactcttacagacacatgatgtacattacctgttgcttgttcatctacttctacaaactttttttatagcgacacatcctatttataaccggcaggctcgtctacttaactttcatcgtgccttcgtccaccaatactcaaagcatctacccccattaatttatccatatatgagaagtatatcccacccattcagaattttatgaaacattaccttagttcatgctgaaattaattccatcaatgtatgacgcaggtcttgctattcctccacttccaacaacttcacccccagttttcccacctcccatcagatcttatcctccacttcctgcaaataagccataccccaatagtatgtctctgaagcaatttttatacaagaactatatattttttatctgcttaccattttcctgtactgaaatatgcaggaccagcagtgtctccagcatcaataatccatcccaccaaccatgggaaggcccatggagttccaattgcagcacattcaaaagaaaggcatcatcattccatgcttgtaaataatacacatggaaatacccatgcaggtccagttgtggcacctccaaagggaaggcatcaccattctttgcctgtaaataatacccgtgtaaaaggtattccaccgactgcacaactaccataatgaacctattgctggtaataaaatgattcatgaagttgtatcgagcaggacctgcctattctccttcaaattctcccagtatccatagaaaacatggcattccagttgctgcacctccaaagcaacattccagcaatttaccaccttcacatcataggccccacaaaggtatgctgacagtaaaaaaaaaaaaagtactcatctcactaaggcaatgtttgctgcaggatcctttcctgtcataagccctactccacataaagctgataatgcttctgcgacgaaacatggacgttctggcttacaccatagtcctgcacctgcacctgtaggcttgcctccatctgaaggaaatgcacgaggaaatcctgcgtatgcaccacgtcatccccatgaatatcactcgccttcaaattctccaggtcagttagacattcttgaaatttctccttttcctttatgttgtctcatttgttctaacctctgcaaatgctccagtcataccccccctaagaacaggccataacatgcacggccttctatttatcatgatgttgaataggattataggacactgagattttgcacggtgatgcaagaattatctctggtatacttgataagagtacggagattgaacttacaccttttattttagtttgcaacccgtcctaccttgctatggtgattaaacacatttggatatgatactaatatttaggtccacaaatttccaccttccactaagtttatctaaatgcaaaagttttatcttctctcaacttatgtcaatcccagtagggccaatttagctcccctgttgcttttataccaatttcaccatataatttgtttttgttattttccatgtcattacgcctatgcagaacctggtctaccacctgtgaatccgcccgacagtcatgcatttaaaaagcccaagagtttggcaccagcaccccaatcatttccgccaccgcctccgagttcatgtatgctacctgaggatactatcttttgtatatgaattcatcaatatatgtgctctatccaatcatgtaagctactcagctgtgatccattcatcttttctatttgccagattgcatggcgttaaattgtcaagatcctctgaccaatagtctccctggaactacatgtctttgtgtgtggccaataaaagttgagcttcgtttaggtatagctttgtacacattctttgcattggtatcagaacttgcacaagatattgcatctggagtgctcatgaaacaaagtcaagttcgtgtaatgggagcaaatgctgcaactgaggacccagagaaaacagttgtccttattgatcttgtgccactgggagaaaaatttgacaaggcaacagcacttttagtatttgaaaggttttggcacaagcaggtcaacataaactctatgcattttggaaactatgatgtgttatatgttacctaccaaggtaagagctatttgtaatttttattgtgtcattatacatattctctttgttaattcctataaaccttattggattttccgatattcgagtaaatccttaattattttgtttattattcaggtcaatcagttcacttcctctgtgtgtgtgtgtgtgtgtgtgagtgagtgagtgagtgaaaccactggcatgatattctttttagccggatcggccaaaggaagaggctgatcaaatttcattaagattgatggagaaaaaaaatagaaattgtaaaagagtacaacaacagtagtctgtcgaaactggtggcaccccagctagctgggtaaccggaaaaagaaaaagggtagggatgggctagagactagtcgccatctcctttcaaaattcctgctgtcctccagacagagatttcatctctaatttcattgacatagtttgttttttagaaagggtcttgatatggttactttcacttattcatacaggtcttcctccgtcgccaccaacagctcccaggatgaacaatggtcttagcaatgttaatgatccaaggttgcatccacttgctgttgatgtgggaaaccacagagaaacaaaaagcaggggcataattgttataattgttctttcaagtgtctttgcttttattttatgttctggagctgcgttggtaatttgtttcaagattagaaaccgcaaccatttaactgaagagtcacctatgccaccgaagcctgcaggtaacaagacattcaatccatgcagtgttgctgtatttatctttattagtcacatattagaaaaggtgtagcaaatgcaatctggtgaaacaatcattgtcattctttccatgactatgggtgagttcgctactggaggtttccaaccgggaacagtgcgcgcggaaaacggagcggttcattagcgcgtgattaattaagtattagcttttttttcaaaaatggatcaatatgattttttaaagcaactttcgtatagaaactttttgcaaaaaacacaccgtttaacagtttaaaaagcgtgcgcgaagaaaacgagaggggaaagttgggaaccggcagtgccgaacacaccctatatccattctgaggccttgttaggattgtttgattattttgtagaaaaccaatccacataaaatgatcattcgttttctagctttcaagaactgagaagttatgtttcatatttgtatggttgaaaagtaatattaccttgaaataatcaaagaacaagagttatatttcatgcttaagtagtgaaagtacttggaacagctttgaccaaatctgaaaggattatatttttgcaaaagttaaaaactgatgctaaattattttcttccatcaatgattgcattggaaatgtaggtcctgggtctgcagttgttgggagcaggctaggaagcagacctatttcagcatctccatctttcagctcaagcatagtgacatataaagggacagcgaaaacatttagcttgattgagatggaaagagctacacaaagatttgacaactccagaattattggcgagggtggttttggacgtgtttatgaaggtattcttgaggatggagaacgggttgctgtcaaaattcttaagagggacgaccagcaagttacacgggaatttttagctgagcttgagatgcttagccgattgcatcacagaaacctggttaagttgataggtatatgcacagaagaacatatccggtgtcttgtgtatgagcttgttccaaatggtagtgtggaatctcacttgcacggtaatattttgttctctttttttttcctctgaacagtttctaaggcatcatttgttactttatcgtgtctattttgcttggagagatgcatcaaaccagtcaagcactttgttgacaagaaattcataattctgccctgtagataatacagctgttgtcgcttataacaaagtcacacatgtgaacactgtgcactaagacatgaaatgtattgtgcactaatctcctgttacattatgtttttttaagggaatcccattacataatgtttcttaagggaattcctttccatcatgttgacaaatacaaacttgcattttataaaattttgacatgtttcatggattcatagtacatccatattctattctccttaataggtgacttttttggccagacataagtattttggccggtccgtaatagctaactagaataatatggttcttttttttaaaattccaagcaggatcagataagggaactgctccacttgattgggatgctaggcttaaaattgcacttggtgctgcacgtgctcttgcttatttgcatgaagattctagtccccgtgtcatacaccgtgacttcaagtcaagtaacatcttattggaacatgacttcacccccaaggtgtcagactttggcctagcaagaacagccataggtgaggggaatgagcatatttcaactcgtgttatgggaactttcgggtaagttttgatctgaaattattatcttactacctgtagttggttaacatcctcaccttaaaaagattatgaactctttttaggtatgttgctcctgaatacgcaatgactgggcatcttctagtaaagagtgatgtctacagctatggtgtcgtcctccttgagcttcttaccggaaggaaaccggtggatattttgagacctccagggcaagaaaatttagttgcatgggcttgtccttttcttactagcagagatggcttggaaacaataattgatccatcacttggaaatagcatcctattcgatagcattgcaaaagtagcagctattgcttctatgtgcgtgcagcctgaggtggatcagcgcccatttatgggtgaagttgttcaagctttgaagttggtatgcgatgaaggcagcgagttcaatgaatcaggaagtttcagccaagatttacatattcaggattctgggattataagtagagcaagcctggatgtggacgtagaacctgttgtatctgctgagctgttcaatgcatcagcacattatgacactcttgatgcatctggttcttttcgacgatattcaagttcaggtcctcttagggtaggtagaaccgggcacaatagggagaggggtttatcaactggtagctcaagcgagcactgtggtacacaaagattcaggatagattcagagtagtcagcttgcaggcttcttttgacgatgtggggctgtgttcattggcttcttttcgcaagccacatttcatattcattgtgaatatctgtgaagagcactgagcaatatcaccagcttctgccgggacaaggaccagttttcgaagagcactgagcaagactgcaagagtaccaacatctcgtcccgtcccgtctctgtttatacagttctagagatctataaagccggttccttttttttagtggaaagtaaagccggttcatcaactgcggttcatcaactgtaaatgttcatgtaccttcccaagtgtagccattcctttcgcatggaaggtaagtgaaatatcagatgaaatgaagggtatttttgcctg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050569.1 RefSeq:Os01g0709500]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:54, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information