Difference between revisions of "Os01g0719100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0719100| Description = Similar to PGPD14 protein| Version = NM_001050616.1 GI:115439602 GeneID:4324695| Length = 5405 bp| Definition = Ory...")
 
(References)
 
(10 intermediate revisions by 3 users not shown)
Line 1: Line 1:
{{JaponicaGene|
+
The rice '''''Os01g0719100''''' was reported as '''''OsRZFP34,''''' in 2014 <ref name="ref1" /> by researchers from China.  
GeneName = Os01g0719100|
 
Description = Similar to PGPD14 protein|
 
Version = NM_001050616.1 GI:115439602 GeneID:4324695|
 
Length = 5405 bp|
 
Definition = Oryza sativa Japonica Group Os01g0719100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Gene Symbol===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
*'''''Os01g0719100''''' '''''<=>''''' '''''OsRZFP34,RZFP34'''''
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
===Function===
|
+
* '''''OsRZFP34''''' is an important regulator of the response of heat and ABA treatments in rice plants.
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
+
* '''''OsRZFP34''''' may increase stomatal opening and function in transpiration cooling when rice plants are exposed to high temperatures.
AP = Chromosome 1:31721191..31726595|
+
* Overexpression of '''''OsRZFP34''''' may result in increased water loss even under drought treatment
CDS = 31721737..31721841,31722098..31722203,31722290..31722381,31722509..31722591,31723049..31723089<br>,31723161..31723204,31723295..31723372,31723463..31723555,31724235..31724322<br>,31724410..31724588|
+
* '''''OsRZFP34''''' may be a good candidate for understanding the signaling pathways for transpiration cooling.
GCID = <gbrowseImage1>
+
* '''''OsRZFP34''''' may modulate several genes to control stomata opening.
name=NC_008394:31721191..31726595
+
 
source=RiceChromosome01
+
You can also add sub-section(s) at will.
preset=GeneLocation
+
 
</gbrowseImage1>|
+
==Labs working on this gene==
GSID = <gbrowseImage2>
+
* Department of Life Sciences, National Central University, Taoyuan, Taiwan
name=NC_008394:31721191..31726595
+
 
source=RiceChromosome01
+
==References==
preset=GeneLocation
+
<references>
</gbrowseImage2>|
+
* <ref name="ref1">
CDNA = <cdnaseq>atgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagctaagataaatgtggaggaacatgctctagtttctctgttgtctgatgagaagtacgcaactgaaaagaccgaagatgtggaccctgatgattatgagaaacttgaggaagggataatgcagtatgggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgccacaatgaaacaaagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacggcaagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatgtttcaaaacagcaatatcattgcaatggttgtggaatatgcagaattggtggcaaggagaatttctttcactgctcaaaatgcggatgctgttattctatagtattgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgagtacctttttgaatcaaccaatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatggaggagcactgccaatttgcttgcccgctttgctctaaatctgtctgcgacatgtcgaaggcatgggagagattggacgaggaactagcaacgatatctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgccagatctga</cdnaseq>|
+
Hsu, Kuo-Hsuan, et al. "Expression of a gene encoding a rice RING zinc-finger protein, OsRZFP34, enhances stomata opening." Plant molecular biology 86.1-2 (2014): 125-137.
AA = <aaseq>MGAMDVQLESTAVQHGQAKINVEEHALVSLLSDEKYATEKTEDV                    DPDDYEKLEEGIMQYGCAHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDAVKRHEL                    PRHEVQQVICSLCGTEQEVRQVCISCGVCMGKYFCEVCKLFDDDVSKQQYHCNGCGIC                    RIGGKENFFHCSKCGCCYSIVLKNSHACVEGAMHHDCPICFEYLFESTNDVSVLPCGH                    TIHVKCLREMEEHCQFACPLCSKSVCDMSKAWERLDEELATISDTCDNKMVRILCNDC                    GATSEVQFHLIAHKCQKCKSYNTRQI</aaseq>|
+
</ref>
DNA = <dnaseqindica>4755..4859#4393..4498#4215..4306#4005..4087#3507..3547#3392..3435#3224..3301#3041..3133#2274..2361#2008..2186#caaagcgctctctctctctctctctctctcgcatcgcgcgcagccttcctcatccccgtcctgatccactccacctccctaatccacagcgcgcgccagaggaaatccggcgccggtcgaggcggccgcgccgcgccgccgtcacgcccagcccactcgattcggtcgcgtgtgcgctaggaagttcgtcatacgcctcgcggttttcacttcgtgtgtttttcttttaaatttttacctgtgcttcgtttaaagcctctcttgatcttaggtatagctttgctcgatctgattataggtatgttgtatgtttctggtctcccgtgattgcgcgtggattgtgattatgactaatttgcttgatctgaatatctgattgtggtggtggtgtgtgtgtgtgtgtgtctgatttgtctgatctgttgtggattattattgtatgatttaccgtggttttatgttgtttatatataagcgtttgccatgagtctgattaattgtattgttgcggtttttcctaggtgtcatactgtcatgctcgatttttacaaggtttagtgcaaactgatagatgatgtccatccccaaaactccgtctaccagtattggttcatgtgcgagcacacgggatagttcgagttcctgtttgatattgattcgctggcgctggttgtttggttggtttattagctagagttgtttgtgtgcaaaggtgggatcatggttgcaaaggcatattgatgaatgacgattcataagcgtggaaagcaatctctgtgcaaggggttattaggattctttgtgcgtattcactctaaaccgatagtcttgtattgctatcagcaccacgttatctatttcctaaccaatgttttctgcatatggactctgcattttgcttcctctccttgtaccacacccagtaccctatgtttgtgcctctcccatggtccatctctcctgttaaaaaaataaaaataaaaataatagaatagaaaaattctagaccaaatacagggaagaaaataaattttgtcaggcaagagagcgacgaggcgatggggaacttattacttttctggacaaatccttcaatttgcctcatctatatcaatggaattgggaaagcagtggactacttaccatgtattggctactaatttccaccactccttgccagagaattgggaaagtgaattctcttatgcaggttctgtcagagtattgtaccagtcattgagatgactgtattcagtagagaagttttgtagataggttaaatttcaggtacaaaccaatgaagtaaaaaagtcttagtatgatggatgtgagaggctcaagaagttccctgattggagaagcaaaggaataagttttttatatggatgtgctatggattttaattaaaagaatggagaagtttcttttgttgaagatgaagctgttggcagctggaggtaggctcccttatgatctaacgtcctaagtaacgacgtatctgattggtgtaagctaataaccaaagccttatcatgaaaccgtcacgcttgtttttttcttttttctttttcttcttgtttcctggcatttgatgctgttacgtgttcctcttgccagagaatgggggtggacaccacagtaagtttgatgcagatggacactgttcgaattgcttgggaactcttccatggaatctggatggataccttattgagtagtaaatttcttaatacagctcgctatccagatagtgctagctgtgattgtttggtgatcaatctattgggattgtgccgactggagctgttcgacattgctttggtcttttgttgatttgcctggagttcggcagtatacagcaaccctggagtgcatgcagtggtttcctcattttttaggacctgactgcattctgtagtgagaactatcctgctaaatgcataatacttgcaggtgttttctgttgtattggcaacgtgatagtttttgtggtgcaaaacattcaagatgggcgccatggacgtacaacttgagtctactgctgttcaacatggacaagctaagataaatgtggaggaacatgctctagtttctctgttgtctgatgagaagtacgcaactgaaaagaccgaagatgtggaccctgatgattatgagaaacttgaggaagggataatgcagtatgggtatgttttttttttttgttctctggttaggcgttcttgataagctccttaagtgccaacaagtttgtgcttaatgtactatgtcaggtgtgcacattatcgaagaaggtgccgcattcgagctccatgttgcaacgagatttttgattgtcggcattgccacaatgaaacaaaggtatggttttcgagttgatgtggaagtgcaatagttaaaaagtatgtactcttttatccatactttcctaggtggttttgatgtaggaatagtcagttactcacaaaggctttgattaactgctgttcatattaatgcatatgtttgaagagcactagtgagtataaaacgtttcctttaaaaaaatcaaatagtgagcataaaatggtttaaaaaaacctaacaatgttctgatcattaactcattttatagctggatatgatttagaaatcagataaatggtatggttgtgacataaaatgaagacacagaatagaactactaaactgctgccagccgtccattatgactttggattatcatccatctgtaacagttgaaatctgttgtattttccattcttacattgaaacagtaatttgatgtatttgcttatgggctgttacatgtacacgacttatttgtattgtaccagcaatttgttggcaactataatatatccttttgttcttttcctggtgaaatatctgaatcgtcactgttttggtttatactgcatacttggaccttccttgggcagttcccaagctgaactatacaagtatctattctttatcatggtattaactgttggtttaaaaatgtggaaagttgttgacatccaaactgttttgacagaattcaattaaaattgatgctgtgaagaggcatgaactcccacgccatgaagtgcagcaggttatatgctcgttgtgtggcacggaacaagaggtacagctgagctatccttgttgcttgcattgtaacattattaattatctggcatctagtgtaatcacgataactcttttatgttaccaggtacggcaagtatgtatcagttgtggtgtatgcatggggaagtacttctgtgaagtgtgcaagctctttgatgatgatgttagtaagaagaataactattttgattgccttgtctatttgtaataagtagataggaaagcataatgacacttctttctacaatgtcaggtttcaaaacagcaatatcattgcaatggttgtggaatatgcaggtttgcatctcttttttgttgtgcaatcaatatgaactggaaaatatacttacattcgactatgtttgcagaattggtggcaaggagaatttctttcactgctcaaaatgcggtaatgcctcttgtctccaacgttgcattccgaagtactataatttaacatagcgccatttaaggaataaggattcttttagtccctgaactcttaattgatgggaaaaggatactgattgatataatgagagatcttgtttatgctacttttcccgatagagatatatgcatcatgcatgggttgtatggacttctgctatgataagattgcagttttttttcccaaaattttctctgttatacactgtatattactagatgaatatcctctacctttctggaagtctactaagatcttgcatcgttaacgttgactatttaaccctgttagctgaactagttcaaaccctcacttgaattttatgacttgatttctattatttatatgcatatgaatgaattttgctagtcacttctcttgatttgtgttcacctttgttatctgtttcatgcaggatgctgttattctatagtattgaagaacagtcatgcatgtgttgaaggagcgatgcatcatgactgtccaatctgctttgaggtaggcattcactgttcttttatgaatggttatatgcagcatactgtggattatattgttgatgagtgacttatcaccttgttttcaagttgtttcttgagtgctgatcttgttacacatatttcagtacctttttgaatcaaccaatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatggaggagcactgccagtaagtcaatccttcttggccctttgtttactatttgtaatgatattatgagtggttgattttgacagcttaaaattgatgctcagatttgcttgcccgctttgctctaaatctgtctgcgacatgtcgaaggcatgggagagattggacgaggaactagcaacgatatctgacacctgtgacaataaaatggtaatgctctcttctctgctcttctgttgtcagtaggaactaaggaaaccatcgaatgttgtagaaaggtgttctaacttctacaccaatatgctatcatatgcttgcccttaggcatgtcgataaagtaacttgaagtatcatggagaattgtatttgcctcatgtcagaaatctgagtcttacctgcctgaatttcatccaaatgttgagtttgttgacacttgctaatttggttcctttgcattaccctgaaggtgcgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgccagatctgaagtggcgaagttttgatgtgattcattttgtatgggaagagagccctgggggatgctcattttgcaacacaaatcccgctaacgcctctgggaatctgatgagctctcggtcgttttcttgctcattggatgcctcagccgaggcaaatcactcgcatctgaaattcatctatgaagtggatgctgttccctcctgtgttcaatttattacctcaccatgtcgcagactcagagtcctgttcagcttaagtttctactagcactagccgagataataagtgcacgtctactcaagcttctgggcataaatggtggctagcttgtgtgttatggtgtgtacttgttgagtctcgggcaaacactgtaacggttagtggcatagtattacttcttgctcgtgtgcgtgtgtagtaggatggcggattgcaggacgtgggtgttatttactggtaggaactgtggtacttgcagtagccaccatttctcatgttcaatgccggtcccatatgccggtcttgttcagttcctataccttgctcggttgag</dnaseqindica>|
+
</references>
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050616.1 RefSeq:Os01g0719100]|
+
 
}}
+
==Structured Information==
[[Category:Genes]]
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 04:20, 8 October 2016

The rice Os01g0719100 was reported as OsRZFP34, in 2014 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os01g0719100 <=> OsRZFP34,RZFP34

Function

  • OsRZFP34 is an important regulator of the response of heat and ABA treatments in rice plants.
  • OsRZFP34 may increase stomatal opening and function in transpiration cooling when rice plants are exposed to high temperatures.
  • Overexpression of OsRZFP34 may result in increased water loss even under drought treatment
  • OsRZFP34 may be a good candidate for understanding the signaling pathways for transpiration cooling.
  • OsRZFP34 may modulate several genes to control stomata opening.

You can also add sub-section(s) at will.

Labs working on this gene

  • Department of Life Sciences, National Central University, Taoyuan, Taiwan

References

  1. Hsu, Kuo-Hsuan, et al. "Expression of a gene encoding a rice RING zinc-finger protein, OsRZFP34, enhances stomata opening." Plant molecular biology 86.1-2 (2014): 125-137.

Structured Information