Difference between revisions of "Os10g0506200"

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(Created page with "{{JaponicaGene| GeneName = Os10g0506200| Description = Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)| Version = NM_001189302.1 GI:297727734 Ge...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os10g0506200|
 
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Description = Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)|
 
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Version = NM_001189302.1 GI:297727734 GeneID:9267455|
 
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Length = 6874 bp|
 
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Definition = Oryza sativa Japonica Group Os10g0506200, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
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Please input expression information here.
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AP = Chromosome 10:19811578..19818451|
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CDS = 19811578..19811586,19812077..19812124,19812236..19812295,19812369..19812538,19812680..19812752<br>,19812912..19812977,19813068..19813151,19813333..19813410,19813505..19813588<br>,19813945..19814024,19814174..19814231,19814316..19814618,19814744..19814914<br>,19815397..19815587,19815686..19816088,19816344..19816595,19816676..19817173<br>,19817456..19817553,19817697..19817796,19818036..19818181,19818295..19818451<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008403:19811578..19818451
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source=RiceChromosome10
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008403:19811578..19818451
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source=RiceChromosome10
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggagaagccactcgatgagaaggagctggaaaggaagctgaagaaagatcagaaggcaagagagaaggaggagaagaggctcaaggcgaagcaaaaggaggcgattaggctacaggcacaagcagcatctgatgaaacaaagaagagcgacaagaaacaaaagaagaaaggcacaccggatgagaatcctgaggatttcgtcgacccggatactcctgctgggcagaagaagctgcttgcttctcaaatggccaaacaatataatccagctgctgttgagaaatcatggtattcttggtgggaatcatctcaatattttgtagcagatgcgacgagttctaaaccaccatttgtaataatcttgccacctcctaatgtaactggggtccttcatataggccatgcgattacagtagcaattgaggatgctatgattcgctggcggaggatgtcgggctataacgctttgtgggttcctggaatggaccatgctggcatagctacacaggtggttgtggaaaaaaggcttatgcgtgacagaaacctgtcaagacatgatctggggcgtgataaatttctattggaggtcctccaatggaaagatcagcatggtggtaccatattgaaacaattacgtacacttggagcctcacttgattggtcacgcgagtgttttacaatggatgagaagagatcaaaagctgtaacagaagcttttatcagactgcacaaagaaggcctaatatatagggataatcgcattgtgaactgggattgctcacttcgtactgcaatttcagatattgaggttgactattgtgaacttacagaagagactttgttagaggtccctggatgtagcactcttgtccagttcggtgttataataaattttgcttatcctctagaggaagggttgggtgaaattatcgttgcaacaacaagaatagaaacaatgcttggtgatactgcaatagctgttcatcctcaggatgaaagatacaagcgtttgcatggaaaacatgctctccatccctttaatggccggaaactcaaaataatttgtgactccaagttagtggatcccagttttggtacaggagctgtcaagatcacgccagctcatgatcttgatgacttcaacactggcaaacgacataaacttgagttcattaatattttcacagatgatgggaacataaatgaaaacggaggtccacaatttgaaggaatgccacgtttcactgctcgggctgctattattgatgcactaaaggcaaagggtctatacagaggcacagaaaataataagatgcgcttgggccgttgttcaagaactaaagatattgtggagccaatgatgaagccccaatggtttgtcgattgtagtactatggcaaaggcagctcttgatgctgtgaaaactaaaaggatcgagatcattccaatacaatacgagcaagactggtatagatggcttgaaaacatacgtgattggtgtatttcaagacagctttggtggggacaccgtataccagcttggtatgtaacgctagaagatgatgaggagaaagacataggttcttacattgatcactggataattgcaagaaatgaaagtgatgcaatcctggaggcaaagcagaggtatccagggaaaaattataagttagaccaagatcctgatgtgctggatacatggttttcatctggtcttttcccattgtctgtgcttggttggccagacagcacagctgatcttagttcattctaccctacttctgtacttgaaactggactggatatcctcttcttttgggtagcacggatggtgatgatgggaatgctacttggtggtgatgtgccatttcagaaggtttacttgcatccaattatccgcgatccacatggccgcaaaatggcgaagtgcctaggaaatgtcattgatcccattgatgtaataaatggtatatcacttgaagatctcgggaaaaagttggaacatggcaatcttgatccaagtgagttagaaaaggcgaaagaaggtcagaagaaggatttccctaatggcattccagagtgtggtactgatgcccttcgttttgccctgatctcctacacttctcagtctgacaaaataaatctggatatcaagagagtgcacggatacagacaatggtgcaataaactgtggaatgccgtccgttttgccatgaacaagcttggagatcaatacactccaccagcggctattgcgttgtgttctatgccacctctctgcaaatggatactctcagcacttaacaaggctgttggcaagactgtttcatcgatggaagcatgtaaattctccgaggccacatcgtctatgtactcttggtggcagtaccaactttgcgatgtatttatagaagccgtaaaaccttacttcaatcaatctcaagagttggaatctgaaagaggtgcttgtcgtgatacattatggatatgtctggataccggtttgcggttgctccacccgttcatgccttacataacggaggagctttggcagcgccttcctcagcctaaagaggcttgtaggaaagattccataatgatatctgagtacccctcagttgttcaggaatggacaaatgatcaagttgaaaatgaaatggagactgtgttggattctgtgaacaagctaagatctcttcggccacatacagatatacatgaaagacggcctgcttttatgctctgccgtggggtagacattgctgccattattcagtgctaccaggcgcagatttcaactcttgcttctgtttcatctcttaagatactgacagaggatgatccaactccacccaactgtgccacaaatattgtcaacaaagatctatccgtatacctccagctacgaggagctctaaacactgaagctgagcgtgagaagctaaggaaaaagcgagatgagattcaaaagcaacacgacaccttgtcgcagaaaatgaatgcctcaggctatcgcgagaaggctcctcagagcaagcaagatgaggacatgaaaaagattgctgcattactggaggaacttgagatcattagagaagccgaaagtgaactagaatcaaacaactga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MEKPLDEKELERKLKKDQKAREKEEKRLKAKQKEAIRLQAQAAS                    DETKKSDKKQKKKGTPDENPEDFVDPDTPAGQKKLLASQMAKQYNPAAVEKSWYSWWE                    SSQYFVADATSSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWRRMSGYNALWVP                    GMDHAGIATQVVVEKRLMRDRNLSRHDLGRDKFLLEVLQWKDQHGGTILKQLRTLGAS                    LDWSRECFTMDEKRSKAVTEAFIRLHKEGLIYRDNRIVNWDCSLRTAISDIEVDYCEL                    TEETLLEVPGCSTLVQFGVIINFAYPLEEGLGEIIVATTRIETMLGDTAIAVHPQDER                    YKRLHGKHALHPFNGRKLKIICDSKLVDPSFGTGAVKITPAHDLDDFNTGKRHKLEFI                    NIFTDDGNINENGGPQFEGMPRFTARAAIIDALKAKGLYRGTENNKMRLGRCSRTKDI                    VEPMMKPQWFVDCSTMAKAALDAVKTKRIEIIPIQYEQDWYRWLENIRDWCISRQLWW                    GHRIPAWYVTLEDDEEKDIGSYIDHWIIARNESDAILEAKQRYPGKNYKLDQDPDVLD                    TWFSSGLFPLSVLGWPDSTADLSSFYPTSVLETGLDILFFWVARMVMMGMLLGGDVPF                    QKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISLEDLGKKLEHGNLDPSELEKAKE                    GQKKDFPNGIPECGTDALRFALISYTSQSDKINLDIKRVHGYRQWCNKLWNAVRFAMN                    KLGDQYTPPAAIALCSMPPLCKWILSALNKAVGKTVSSMEACKFSEATSSMYSWWQYQ                    LCDVFIEAVKPYFNQSQELESERGACRDTLWICLDTGLRLLHPFMPYITEELWQRLPQ                    PKEACRKDSIMISEYPSVVQEWTNDQVENEMETVLDSVNKLRSLRPHTDIHERRPAFM                    LCRGVDIAAIIQCYQAQISTLASVSSLKILTEDDPTPPNCATNIVNKDLSVYLQLRGA                    LNTEAEREKLRKKRDEIQKQHDTLSQKMNASGYREKAPQSKQDEDMKKIAALLEELEI                    IREAESELESNN</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
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DNA = <dnaseqindica>1..9#500..547#659..718#792..961#1103..1175#1335..1400#1491..1574#1756..1833#1928..2011#2368..2447#2597..2654#2739..3041#3167..3337#3820..4010#4109..4511#4767..5018#5099..5596#5879..5976#6120..6219#6459..6604#6718..6874#atggagaaggtgagtgctcgtataatatactccctccttccctaaatgtttaacgctgctgacttttttaaacatgtttgaccatttgtcttatttaaaaaattatataaaatatgtaaaactatatgtatacataaaagtatatttaacaataaattaaatgatagaaaaagaattaataattacttaaatttttcaaataagacgaacggtcaaacatttttaaaaaagtcaatggtgtcaaacattttgggatggagggagtattagattagaaatttcttgtgggagtgctcgtatgtttgtctggtacgcaagcagtaagattgaatggcttaattaataatacctacagtacacacaatagattaaaaacaaacaatgtagcttgtatttctgcgttagcattgcgctgctttggttaattcctcgcaaaaacagctctttgttttggtctgatgcatttgatatgatgttgtgtgttggtggcttggtgcagccactcgatgagaaggagctggaaaggaagctgaagaaagatcagaaggtactcactctagtaggattgctgttatgtacttctgttaacaattcaaaggaatcgtgtccagttcaccagttgtttggtgtatgaataagtgtgttatgtatgtaataggcaagagagaaggaggagaagaggctcaaggcgaagcaaaaggaggcgattaggctacaggtgttaaaaataatccctgctcagataaatgtgttttactgtcaattctttgtattgatgtggttgtctgcaggcacaagcagcatctgatgaaacaaagaagagcgacaagaaacaaaagaagaaaggcacaccggatgagaatcctgaggatttcgtcgacccggatactcctgctgggcagaagaagctgcttgcttctcaaatggccaaacaatataatccagctgctgttgagaaatcgtaccgcctctcttgctttattcctcgatttaatttattttcaatgaggatatatctttcatatcgttagaaccttaggaattcataacatgaaatttctcacttatctgtccttttttccggtatgttgttttcatgtagatggtattcttggtgggaatcatctcaatattttgtagcagatgcgacgagttctaaaccaccatttgtaatagtaagtccactataatgcaaagagtgcatgattatatatttgtattcaggataaatactttatcatgattactgtgtgagtagtatgtcctatatgaaatacacaattgaagctttatttctacttctcattttgcatttgcaatgtttatttttccagatcttgccacctcctaatgtaactggggtccttcatataggccatgcgattacagtagcaattgaggtatttattgattgattctcctgtttattcattggccatataagcatcagtattgatgtctttttggttgttgcatcgtgaacaattcaggatgctatgattcgctggcggaggatgtcgggctataacgctttgtgggttcctggaatggaccatgctggcatagctacacaggtctgtcatgcatataacatatatatggtatctgtttctaacatataacctctacaggaattattgttaacttgaatacaaattgacttttgctgaaacatcacattgattgttaaccaactttctgttttagtttttaagggtagcaggctttatgtaacaaaatttctcttcatatcaggtggttgtggaaaaaaggcttatgcgtgacagaaacctgtcaagacatgatctggggcgtgataaatttctattggaggtaatcatttttttcttacctattgcatattgtattaacttcacagttagtttcatttttatttatttttttcattcttcaatcttcttggcaggtcctccaatggaaagatcagcatggtggtaccatattgaaacaattacgtacacttggagcctcacttgattggtcacgcgaggtataatttgttttgatttcccctaaggttgtagacagccagaggagagcaccatttatatctaagcaatatattttgttgaataaatatgacaaaactccagacattatggttcagattgcacaaaaccacatgttttttggcatgttgcacataaccaaaggcattatggtcctataattggttaatggtgtggtttagtgaaatcttaataccataatatttgtggttatgtgcgatgtgccaaaactctgagttttgtgcaacttgaaccatacctggggtatataaaatgtattcatatattgttttgctttgttgttaaatagtattgattttcttgcaacttgtttcagtgttttacaatggatgagaagagatcaaaagctgtaacagaagcttttatcagactgcacaaagaaggcctaatatataggtcagtgtcaaaatatcgttgaatgtgtagtttaactttctatatttgttctgcttcagtaattttctattcgaattgtgtgtttcttagtttatgttttcttactgcagcacatcttactttgtaaattctgtatgatttacttgcagggataatcgcattgtgaactgggattgctcacttcgtactgcaatttcagatattgaggtatacgatacttctaatatgattaacattttgatttgttgatgaggaggattgtatttttatgttttgctcgctacttttcaggttgactattgtgaacttacagaagagactttgttagaggtccctggatgtagcactcttgtccagttcggtgttataataaattttgcttatcctctagaggaagggttgggtgaaattatcgttgcaacaacaagaatagaaacaatgcttggtgatactgcaatagctgttcatcctcaggatgaaagatacaagcgtttgcatggaaaacatgctctccatccctttaatggccggaaactcaaaataatttgtgactccaagttagtggatcccagttttggtacaggagctgtcaaggtaagtgtactcactgaaggagtgtctcgtatatcttaattttattttccatacctggattgattatattcatcaatcagcaagctcttatttcttttttctattttgctgttgtttccatacagatcacgccagctcatgatcttgatgacttcaacactggcaaacgacataaacttgagttcattaatattttcacagatgatgggaacataaatgaaaacggaggtccacaatttgaaggaatgccacgtttcactgctcgggctgctattattgatgcactaaaggcaaaggtattattagattatttagttttccatttccttttctaattaattcctcgatggtattgtagtctctcacaatttcagatggtttattatcatgctttttatggaatttattttacatttatcttctctctctctctctctctctttctctctctctcaatggtgcattgatgtattgtcactttgtcactttattagtttctcacaatgaaatactattgttctctatgaaaaacattatgatattgggatactgttgagtgttgctattatgttctgaaagcatctagagtatggttaagctatgaatataccattcagctttgttcttgagttggcatactgattaatcttttagttttatttggaaatttcatcttgttgcctgcttaactatctttcatgtgccaccagtactttcctgtattctattgtcttagaagaaatgccaaattacaatcatttacaccttttcaattaagggtctatacagaggcacagaaaataataagatgcgcttgggccgttgttcaagaactaaagatattgtggagccaatgatgaagccccaatggtttgtcgattgtagtactatggcaaaggcagctcttgatgctgtgaaaactaaaaggatcgagatcattccaatacaatacgagcaagactggtataggtatatcctattttcttttctttaggaaaacataattggtaaatcgcaacattggatagtagaataacccattcacttctactgttctgtggtaacagatggcttgaaaacatacgtgattggtgtatttcaagacagctttggtggggacaccgtataccagcttggtatgtaacgctagaagatgatgaggagaaagacataggttcttacattgatcactggataattgcaagaaatgaaagtgatgcaatcctggaggcaaagcagaggtatccagggaaaaattataagttagaccaagatcctgatgtgctggatacatggttttcatctggtcttttcccattgtctgtgcttggttggccagacagcacagctgatcttagttcattctaccctacttctgtacttgaaactggactggatatcctcttcttttgggtagcacggatggtgatgatgggaatgctacttggtggtgatgtgccatttcagaaggtaatatttaggttatttcattcttaaatagttcttggtcaaatctgttagattctagtgatagtgatagttcagtatgattgccttctaaaattatttgatatcattttaagtttggtaacttagcttttggtccttgtcgaatcatgttaacttttctatgctaaaaatgaatcaatcattaacacgcggttagaaacttcacaagtactagtaatttttaaaccgtgactcatgactgcttatctgtctcaggtttacttgcatccaattatccgcgatccacatggccgcaaaatggcgaagtgcctaggaaatgtcattgatcccattgatgtaataaatggtatatcacttgaagatctcgggaaaaagttggaacatggcaatcttgatccaagtgagttagaaaaggcgaaagaaggtcagaagaaggatttccctaatggcattccagagtgtggtactgatgcccttcgttttgccctgatctcctacacttctcaggtaaattttcccaccagcttttgttgttccttttactgttagtaaaaatttcttgtagtaacatttcttgtcttgttcagtctgacaaaataaatctggatatcaagagagtgcacggatacagacaatggtgcaataaactgtggaatgccgtccgttttgccatgaacaagcttggagatcaatacactccaccagcggctattgcgttgtgttctatgccacctctctgcaaatggatactctcagcacttaacaaggctgttggcaagactgtttcatcgatggaagcatgtaaattctccgaggccacatcgtctatgtactcttggtggcagtaccaactttgcgatgtatttatagaagccgtaaaaccttacttcaatcaatctcaagagttggaatctgaaagaggtgcttgtcgtgatacattatggatatgtctggataccggtttgcggttgctccacccgttcatgccttacataacggaggagctttggcagcgccttcctcagcctaaagaggcttgtaggaaagattccataatgatatctgagtacccctcagttgttcaggtaaatacatacttcgtactgactttggaaaaaaaaatgaattcttctagcttgtaacttttcagagatcagtatggtagagtcctattgcataacgattaaaagcaaaccactgtaaattctagcactataatcaatatatgtaaaaatgatgaagaaatgattaatgcattgtctgcctcagttggagagaccatagatttaagaaattctgcaatcctatgaaaaaaaaaattctgcaatgcctattttgactagaggttttcttttgacggatgacaggaatggacaaatgatcaagttgaaaatgaaatggagactgtgttggattctgtgaacaagctaagatctcttcggccacatacagatatacatgaaaggtatgcttatgttcaccagatgtatattcttttggtgtgcttcaagactgtcacttcctttttatagttttattcttattttgattcataagaatttgttcattttgaagctaataccttctgccctattttcatctggacagacggcctgcttttatgctctgccgtggggtagacattgctgccattattcagtgctaccaggcgcagatttcaactcttgcttctgtttcatctcttaaggtttgctcggtcttatacctctctggctctctcaactcggccactcacctcaagtcactgtttatgaatgccttgttcttgatggataatggcataatttctatttctatttcaattcaattcactcgagttttgtctacagatgtgcttatatttttgctaatatattttatgtctaaaatgcctaaaaagccaaaaaaaaaggagggaaaaaactgattcaaagggaacttttgcagatactgacagaggatgatccaactccacccaactgtgccacaaatattgtcaacaaagatctatccgtatacctccagctacgaggagctctaaacactgaagctgagcgtgagaagctaaggaaaaagcgagatgagattcaaaagtaagtgccctgttaaaccatctgaacataaatttgaacgaaccaatttgaacataaatgaaatttgtagttttgttagtggtaagacgttctatttcccactgtaattgcaggcaacacgacaccttgtcgcagaaaatgaatgcctcaggctatcgcgagaaggctcctcagagcaagcaagatgaggacatgaaaaagattgctgcattactggaggaacttgagatcattagagaagccgaaagtgaactagaatcaaacaactga</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001189302.1 RefSeq:Os10g0506200]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 10]]
 
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[[Category:Chromosome 10]]
 

Latest revision as of 12:48, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information