|
|
| (One intermediate revision by one other user not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | Please input one-sentence summary here. |
| − | GeneName = Os01g0836400|
| |
| − | Description = SAC3/GANP family protein|
| |
| − | Version = NM_001051266.1 GI:115440902 GeneID:4327459|
| |
| − | Length = 9684 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0836400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Function=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | Please input function information here. |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Expression=== |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| + | Please input expression information here. |
| − | AP = Chromosome 1:37601127..37610810|
| + | |
| − | CDS = 37601460..37601513,37603081..37603896,37604033..37604557,37604860..37604958,37605949..37606052<br>,37607109..37607286,37607362..37607832,37607971..37608111,37608878..37608937<br>,37609401..37609531,37609653..37609818|
| + | ===Evolution=== |
| − | GCID = <gbrowseImage1>
| + | Please input evolution information here. |
| − | name=NC_008394:37601127..37610810
| + | |
| − | source=RiceChromosome01
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | ==Labs working on this gene== |
| − | GSID = <gbrowseImage2>
| + | Please input related labs here. |
| − | name=NC_008394:37601127..37610810
| + | |
| − | source=RiceChromosome01
| + | ==References== |
| − | preset=GeneLocation
| + | Please input cited references here. |
| − | </gbrowseImage2>|
| + | |
| − | CDNA = <cdnaseq>atggcggcccagggcggggaggcggctgccggatccgacgccaagcccactgcgggcacaggcatggagcagccaagtccatctccatatcaaccttcagcttctgatcatcatttgtggtcttcttcgactggtgctccctggaactattcaatgaataactctaaccaaaacacagtttattatgacccacaaagggatgtgtcagttccaggatctactgaaaatgtgacaagtggtgcaactcatgtggtccaatcagctatgggcattactggtgcaactgattcttatgctccttactcgaattctgttcaacccggttacaatgctccacagtatccaaactattactataactgtccacaaagtacaaatgaatcttctgttcaacaaggagtagatcaaagttcaggtgctgcttatcagcctcttacttcatttcagaattcaggatcttatgttggtcctacaagtaacacatattataatgctggtgctcatcagactgcaccgggatatgctaccagcaacaattattatcaaagcaattcctggactggcggaagttctggagataatcatgtacaatcatatcagagctatactccatcagatactaatgcagcccagagttctagttcactacccaacaattcttaccattatcatcagcagtataatcaatggccttattattatgatcagtccgcaccaagttctggtggtcctgcagttgctgtcagcagtgtttctgatgcaaacactgccagcgtcagttctggttatgtttatccgagcacccaaccacctccaccaggcactacatggagaagtgatgctggtgcaactgctgtccctcccccgcaggcaccaggaaccccagtgtttcaaaatcagcatgtcaaccaggcagcaggtcccccagggtatcaaaaccagtatgtcaaccaggctccaggcaccccaggattccaaaaccagtatgttaaccaggcaccagctgtcccaggatttcagaaccagtatgctaacctagcaccaacatatcaaccgggcactacatactatagtcagttaccactaagtaaccaagcagatcaacagaaggcttcacgttggcagggtccaatttcaaacgtttcttcagtcaatcatgtttctgaaagttctcaaccaacttttcagggttctgcgacatcagatgctctcagggtaaacaaaatccagatcccaacaaatcctcgaatagctccaactcttcctatggcaatgcccaaagtagagaagagaaatttagaagctgattcatcaaaaaagcctgcatatgttagtgtcgcagtgcaaaagaatgatgtgaaagcagctcaagatggtcacgaagctgtaacgcagggatcaatccctgtttcgcttcgtacttatgttgggcggaatgtttcccgttgcaaggatgatgcccagaggtctgccgtgcagaacatcttgaaagagataatcaccaaggcaactgctgatggtatccttcatactaagaactgggacattgagccactggttcctttgccagaaaacattacaagcacaaatttgacaagctctgcaaaggatttgagccccttctccttctcaacttctaggaggagccctagtagacgtgcaaaaagcaggtgggaacctgttgtagaagaaaaggttgcaaataaggtggaattgatttccaaagaatcagcaaagaccaatacctacaatagttcagaaacaactaaaagagcgggtagaagttgggatattgggaagtttctccaatcccgtcaggctcctttaagtcaatataatcagagacctagtaaaaagaagcggattggtggtaactcaagtctaactgaaaatggaaatgtttcaagtgacagtgataaggagcaggatctgacaaaatattatgctaatgcaatcacaatagcaaattcaccagaggagaagaaacgccgggagcatagatccaagcgttttgaacgtagtcagggtgctgcatcctcaaaatctaggagctctgttccagataaggatggaacatccaatacatatgctaggagatctatgccaatgcttcttagcagaagtaatggagatgatgttagcttcgctgtggaggatttggattgggatgcactgactgtcaagggaacatgtcaggaaattgagaaaagataccttcgtcttacatcagcacctgatcctgccacagtaaggccagaagatgttttagagaaagctcttcatatggttgaaacatctcagaagaattatctgtataaatgtgaccaactaaaatcaattcggcaagatcttactgttcagaggattcagaacgagctgactgtcatggtttatgaaactcatgcgcgcttagcacttcaatctggagatttacctgaattcaatcagtgccaatcgcaactgaagagattatatgcagaaggaatcaaaggctgtcatttcgaattctctgcttacaacttgttgtgtgtcatgttacactctaataacaaaagagacttgctttcttcaatggcaagcttgccaaaggaagccaagcaagacagaactgtcaaacatgctcttgcagttcattccgctgtttcatctggaaactatgttctatttttcaaattatacaagaccgcacctgacttgaattcttgtcttatgggtaaatatgatctccctctctctgtaatttga</cdnaseq>|
| + | ==Structured Information== |
| − | AA = <aaseq>MAAQGGEAAAGSDAKPTAGTGMEQPSPSPYQPSASDHHLWSSST GAPWNYSMNNSNQNTVYYDPQRDVSVPGSTENVTSGATHVVQSAMGITGATDSYAPYS NSVQPGYNAPQYPNYYYNCPQSTNESSVQQGVDQSSGAAYQPLTSFQNSGSYVGPTSN TYYNAGAHQTAPGYATSNNYYQSNSWTGGSSGDNHVQSYQSYTPSDTNAAQSSSSLPN NSYHYHQQYNQWPYYYDQSAPSSGGPAVAVSSVSDANTASVSSGYVYPSTQPPPPGTT WRSDAGATAVPPPQAPGTPVFQNQHVNQAAGPPGYQNQYVNQAPGTPGFQNQYVNQAP AVPGFQNQYANLAPTYQPGTTYYSQLPLSNQADQQKASRWQGPISNVSSVNHVSESSQ PTFQGSATSDALRVNKIQIPTNPRIAPTLPMAMPKVEKRNLEADSSKKPAYVSVAVQK NDVKAAQDGHEAVTQGSIPVSLRTYVGRNVSRCKDDAQRSAVQNILKEIITKATADGI LHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPVVEEKV ANKVELISKESAKTNTYNSSETTKRAGRSWDIGKFLQSRQAPLSQYNQRPSKKKRIGG NSSLTENGNVSSDSDKEQDLTKYYANAITIANSPEEKKRREHRSKRFERSQGAASSKS RSSVPDKDGTSNTYARRSMPMLLSRSNGDDVSFAVEDLDWDALTVKGTCQEIEKRYLR LTSAPDPATVRPEDVLEKALHMVETSQKNYLYKCDQLKSIRQDLTVQRIQNELTVMVY ETHARLALQSGDLPEFNQCQSQLKRLYAEGIKGCHFEFSAYNLLCVMLHSNNKRDLLS SMASLPKEAKQDRTVKHALAVHSAVSSGNYVLFFKLYKTAPDLNSCLMGKYDLPLSVI </aaseq>|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | DNA = <dnaseqindica>334..387#1955..2770#2907..3431#3734..3832#4823..4926#5983..6160#6236..6706#6845..6985#7752..7811#8275..8405#8527..8692#actcgtccccctccgccgcacccgccgacccctcctctctcgtccccggcccgacggaggtggaaaaaaaaaagaaaaagaaaaaaaaactcaaaccgccgcactcgcacatccggctcgccatagtccccctcttctccaacgaaatcttcgccgtgtcaacccgcgcctccgatttctccagcttttctttcccgggattgcgcgcgtgctccctcccgctcgatccggctccgcttgcccgtgctagccgcggactcggggggtggctctcacctgttgtgaggccgctagggtttcagctcgagctctggagccgtagggcgccgggatatggcggcccagggcggggaggcggctgccggatccgacgccaagcccactgcggtatgcttcctctgctcctgattcggcgtcagtccctagcttgtgagttgtgaggcctctgccgccgcatccttttggagttgtgattatttcctgcacttgcgcggtgtgattcgcctctgctttgggttaggatgcagtgggtggtatccataatctagttgattacttcagtgttttctgcttgggcgtgttgccttgagaaacttaggtttagtgcaacggttggatatctagttgtagccggtggaagatgtttagggatgttttttttttgctaatttacttgttcacgaatttaggaaaaccaaggactgaaatagtcgaagtaggttgatgccatatattacaatgttgttgtttactactacctccttccccaaatgtttgacgttggttagttccaacgtcaaacagaaaagaatggagggagtactactgttgctttgcttatagcataatggctgcgcactcttcctatctacgtacctagttgacaagccgtcatggttgttggtcaatttgctgtggtttagccgtttagtcccccggaggttaatacatgaggcgcttataatgttgtccgttgccagcgttttggatgtaactgaatagcttgtttcattctgaaattgataacgttgtttgtctgcactctacataaattgtatgcttcattctgtactctttaatgttcagtggatatggctgatatggagctgccacgaataaagttttaaatgttattaattagagcgtgcccacctatttacaaggcgttttctttccctttttgaaaccggcatgcctaatgtttcggatatagcagtaaacaggtttcggaaagctaggatcaaagatctactggtgaaaccatttagcacgtgaggacctgctttttaggagtctgttttgtgaagtaatgccctaagtgtgaggacctgtgatgccatctgcttattctgtaagacataaatttataaagatgggcataaatgtaactgtacttatgtaggtttgtgttaaatttgttgtgcatctttgcttgaacggcaggttaaagccagttgatgctgtagtttgtgtatattctaatattgcatttattagacagtttctgctgtcatttgtttgccacgtcatccttttagattttctctgccacatctgacatgtcattatgtactatattgtgagataaagcatgaaaggggaattctgccttgtatagataaaggtggttttgtacaaaacaagtaaggggaattgtacataaaggttttttttgtataaagactgtcttataaaacaagtcattactgtgtgaatattaccttggcattctttttgcatctcatgctgtttttttttctgtgggtcacgtggcacaatagtgtactcctaatgtttttctgcctgtttctacactttgctacatggggatcgatatttctttccatgattttccctgttttgccagagaagcgtcatattgtgttgtaagttttttttttcacatcatacattgttccaacctgaaattttgtttgttctaaacaaataatagggcacaggcatggagcagccaagtccatctccatatcaaccttcagcttctgatcatcatttgtggtcttcttcgactggtgctccctggaactattcaatgaataactctaaccaaaacacagtttattatgacccacaaagggatgtgtcagttccaggatctactgaaaatgtgacaagtggtgcaactcatgtggtccaatcagctatgggcattactggtgcaactgattcttatgctccttactcgaattctgttcaacccggttacaatgctccacagtatccaaactattactataactgtccacaaagtacaaatgaatcttctgttcaacaaggagtagatcaaagttcaggtgctgcttatcagcctcttacttcatttcagaattcaggatcttatgttggtcctacaagtaacacatattataatgctggtgctcatcagactgcaccgggatatgctaccagcaacaattattatcaaagcaattcctggactggcggaagttctggagataatcatgtacaatcatatcagagctatactccatcagatactaatgcagcccagagttctagttcactacccaacaattcttaccattatcatcagcagtataatcaatggccttattattatgatcagtccgcaccaagttctggtggtcctgcagttgctgtcagcagtgtttctgatgcaaacactgccagcgtcagttctggttatgtttatccgagcacccaaccacctccaccaggcactacatggagaagtgatgctggtgcaactgctgtccctcccccgcaggtattatttcttcattagtacttgggaacctgtgactctgagcacttcctatgtcctattcattgtatatttttttattcaggtttttcccacaagtagttttgcgttgccaaatttaacagttagcaattgacaggcaccaggaaccccagtgtttcaaaatcagcatgtcaaccaggcagcaggtcccccagggtatcaaaaccagtatgtcaaccaggctccaggcaccccaggattccaaaaccagtatgttaaccaggcaccagctgtcccaggatttcagaaccagtatgctaacctagcaccaacatatcaaccgggcactacatactatagtcagttaccactaagtaaccaagcagatcaacagaaggcttcacgttggcagggtccaatttcaaacgtttcttcagtcaatcatgtttctgaaagttctcaaccaacttttcagggttctgcgacatcagatgctctcagggtaaacaaaatccagatcccaacaaatcctcgaatagctccaactcttcctatggcaatgcccaaagtagagaagagaaatttagaagctgattcatcaaaaaagcctgcatatgttagtgtcgcagtgcaaaagaatgatgtgaaagcagctcaagatggtcacgaagctgtaacgcaggtgagtaacgattctatttacttgtttttgttttggtgattatcaacgatactattattatccttcagggacaaggaaccaactttgtggaaatttaaacatgcttactccttaacatttccatttttgaaattatatttgtacattcctggctctcaaataagtggcagtgcccagattcaaaatttgtcaaatctctaatgtacttaatgcctgtcgatttctcatgtggtcatgccaaatataacatgcacagctttacatctacctgttttgtttacacaatttcctgatctgtttagggatcaatccctgtttcgcttcgtacttatgttgggcggaatgtttcccgttgcaaggatgatgcccagaggtctgccgtgcagaacatcttgaaagaggttcagtaatctgttgtttttaattctttttaaacactatatcttggtttctgtctggctggattctagttatagacgcaaccttcagttcatgagacctttagtaactatgggaatgggtaaaatagttagggttgttccatactgaagttaacacactaacatcaacgacagcaataaataaatagataggtagatatatacaaggtacataaacaaagatccacaaagaaacaatggcacagaggccagacaagcaaatagaaaacagagtagatcacgtaggtgaattcctgaagcctcttggagatttggcagaaatttcttgttagtttttacctgagaaggttcatttctgctgtaagcattctcttccacctatgcttgtttggaggaatcttgtcaaagatgtatctgttctttagatttggcagaaacttcttgttagcttaacctgagaaggttcatttctgctgtaagcattgtcttccacctatgcttgtttggaggaatcttgtcaaagatgtatctattctttataaccatatatgccagcaaccagaagggaaaaaattctttatacacttctttacaagatgtatatgcacgccttgtggagtttaaccataaaagtagagagctcctatggatctctatcaactcccagcaagctagactgaattcacaggagacacacagatgatcataatcttcaatataattgatttgcgaagaatacatgcttcactctccactttggaattcttcattttaagcatgcgcgttgcgtttgttttaccgtggagaagtagccataggaatattctatacttaggcatgcattaatttttccacaaaaagtgacttcatatttaagctcttaagttgattttcattatgcgcccattggagcttgccatgaaatatatgttcttacaaacttcataaagagtctcctaagtcccaagtttttcccttccgataattcagataatcaccaaggcaactgctgatggtatccttcatactaagaactgggacattgagccactggttcctttgccagaaaacattacaagcacaaatttgacaaggtgtgctgctcttccctccatttcctccttccactagtgatgatgtagcttttcatgtggcagtaaccatcaaatcatatgcttgtattcttgtatagcacctttttggttagtagtattctttaggagtatttcctgcagcttgatttgaattatttggatattggaaagcaaattttgttgccattgatttataactatgtaaagatgctttgctttgttcactatgaaaaaaatctcacatttttctcttaatgcttgaacatacaagtactgtaaaaactgagaacaacagcactgtgctagatgcaatatatgccacttaagaagcatcatgggcaggatcaccaaatcataattcctcccccacctccccacatagaactattaagatcaagaaattattggaataacatctgttctttgttttgttgttcaacacatgataagggtaagtgggttacttgcttaggcaggtaaaaacattgtagagtctactaagaatgcatggtagtaggcacattgacatgtcagttcagtggatgcctcggagcaccagtgcatattgtgttggagggcctagcttcttcctgaagatgcttttctggaataagctggtggggacggacttcagctggccagtactataggggcttaagcctctctaacaaacctcaaaatctacccgttagagtcttatagaggatataggctcatgccatatggtggttttaagcttacagagttcatcaaaacaacaccataaccaaacaactaatcttggtcattgagataatcagataaacttgggatttatgaaaaataccaatataccattgccattgtagcactgaggcatcgtgaagttgcaaaatgccatgcaaatatgcttgggttataaatgccatagtcatcaaaatccatgctattcatgtccatttaggagaaaggtaatatcacatatgatggtactttccacactttatcgtatttgcaagttcatgattatcttaatgatatagagctaaatttctcaatcctttttttctttggcagctctgcaaaggatttgagccccttctccttctcaacttctaggaggagccctagtagacgtgcaaaaagcaggtgggaacctgttgtagaagaaaaggttgcaaataaggtggaattgatttccaaagaatcagcaaagaccaatacctacaatagttcagaaacaactaaaagagcggtaagatctcagtatgggttcatataacatgcatgcctttcatttatgagaaatacttagctaaatactttgcagggtagaagttgggatattgggaagtttctccaatcccgtcaggctcctttaagtcaatataatcagagacctagtaaaaagaagcggattggtggtaactcaagtctaactgaaaatggaaatgtttcaagtgacagtgataaggagcaggatctgacaaaatattatgctaatgcaatcacaatagcaaattcaccagaggagaagaaacgccgggagcatagatccaagcgttttgaacgtagtcagggtgctgcatcctcaaaatctaggagctctgttccagataaggatggaacatccaatacatatgctaggagatctatgccaatgcttcttagcagaagtaatggagatgatgttagcttcgctgtggaggatttggattgggatgcactgactgtcaagggaacatgtcaggaaattgagaaaagataccttcgtcttacatcagcacctgatcctgccacagtgagaatgctctgctaatattaccttgtaaactgcctagattggaaaaacatattgttgataggaaattgtctctagatgttgttttcttccttttgctactccttgctttagttttgtttcatcataccttttcaggtaaggccagaagatgttttagagaaagctcttcatatggttgaaacatctcagaagaattatctgtataaatgtgaccaactaaaatcaattcggcaagatcttactgttcagaggattcagaacgagctgactgtcatggtagcctttcttagcccactttgtgtgttatatactgcattatactcctgttcactatgttagtccattttcacgggaaatatcatttcacaatgtatccgagaaaaataatactccctccatcccaaaatataaggcacaaccatttttttctgtctcataatataaggcgtgcatgcatgcatacattaattatcttctcctggttcttttaatttggtttattttaattcatgtaccattaagtctctcaatcacattgcttgcatgtatggatatgattcaattaaggaggtgattaaattttttcttggtctttgtgttagtagtggttgtgccttatattttgggatggatggagtagttgctatttgcactccttttcccaaatttagtaatgtgatcatgtgaatacatagttgctgtgtgctattcaatgtggacgcacatgatcatttcttatcaatttttttcttaaactgctgcttcattggcctatttgcatggttggctaggacagatattacaggacggagtagtttctaacagtttggcgtgcctcgattattctgtttgttttaatgttttgattcatgaaggaaattatttagttaatattattttggcatgccatccttttttactctattatctatctttgatttttcatgtcaacgctgttccaacttcccgccatttgtttcatcttgcctgctttttttggtagcttccatattacttgttttattctctctttttttttcaggtttatgaaactcatgcgcgcttagcacttcaatctggagatttacctgaattcaatcaggtttgcttatcttgttctgaatgtctgtccttattcctgacataagaataataaacaagtgtcatgtgctattgtagtttcattacgcacgtctactaacagccttgttagaaattacccgctctcagcggtttgagccaagttaacgtacataatactctggtgaaataaagccccccatgtccttattagtttctagttgaaagtcttgacccccccccctccctctttttttttaacagaagcatatatgtagcacatggtctatactactaccaattgcaactgccgtagaaatgcagtaaattagccatgttaaagtgttggtactttgcaaattgtgtcttttctaaaactggatgctctattcttgaattattaagttttgtttgtctagttgcctcacagaagaaagaaacctacagcctaatttttttattgtttctgctgcaactctttgcagtgccaatcgcaactgaagagattatatgcagaaggaatcaaaggctgtcatttcgaattctctgcttacaacttgttgtgtgtcatgttacactctaataacaaaagagacttgctttcttcaatggcaaggttggttatttcacatgagttggttaatatgagtccattagggttgcataatatgagcacatatgagttggttatttcatagttacatgaaccttatttgatatacatccatatctaatagcttgccaaaggaagccaagcaagacagaactgtcaaacatgctcttgcagttcattccgctgtttcatctggaaactatgttctatttttcaaattatacaagaccgcacctgacttgaattcttgtcttatgggtaaatatgatctccctctctctgtaatttgaagtgttcatctaatttcattgagatggtgtttttgctttgcaacttgcatgattggtgctgtagatctctatgttgaacggatgcgctttgaggctataaaatgcatatctaaatcatatcgcccaactttacctgtaaaatatgctgcacaagttttgggattcatggcaattgacgaagtttgtgaagctaaaagagctgatggattggaagaatgtgaagaatggttaaaagcgcatggtgctgttctttcagtagataacaataacggagaattgcagatagacacaaaggtaaaacacgcagcaggtttttgcaatgtgtttgtgttgtattggcttttgaaacactgcactacctctattgttcgacaggtttcttctacttccctatacatgccggaacctgataatgctgtttcacatggtgatgcatcacttgctgtggatgattttttggcacgaacatcataggtgatgccatgctgagcatttttatcactcatgtggcactgaacttcgaaggtatttctcgattgcatgtagcaatgcctgtagaggaatgttctgttaaatgcagggtaggaccttgaaatggatcagctgaagggggaagcacggtcccttgtcgaagagaacagaatgcacatgagcaggtcgctttctattatactcaaaacgtgctctgggcctctgaatctcagatgctgtgggatcgttggcatgttgctagctctacagccctgcagcagttccattttgacaaacaaaattctggaggcagcattaaccgaaaaaaaaaaaccctcctcgaagtatacattggcgggcattacttttgtaccgtcccagccagacgacaagtgtacatgttgagatgtagtcgtaccttcaggcttcagtgtattgtacaatttttgtttacatcggtgaccctgatgttactcatttcattgatcaactgcaaatagttaatacaaatttggaagtac</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051266.1 RefSeq:Os01g0836400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
