Difference between revisions of "Os01g0881000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0881000| Description = Zinc finger, FYVE/PHD-type domain containing protein| Version = NM_001051531.1 GI:115441432 GeneID:4324846| Length =...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os01g0881000|
 
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Description = Zinc finger, FYVE/PHD-type domain containing protein|
 
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Version = NM_001051531.1 GI:115441432 GeneID:4324846|
 
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Length = 8417 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0881000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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Please input expression information here.
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AP = Chromosome 1:39984659..39993075|
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CDS = 39984659..39985296,39985383..39985410,39985538..39985658,39985794..39985906,39986012..39986094<br>,39986456..39986518,39986688..39986842,39986999..39987168,39987689..39987777<br>,39987892..39988084,39988243..39988367,39988657..39989063,39989443..39989507<br>,39990002..39990280,39990360..39990433,39990829..39990880,39990954..39991061<br>,39991459..39991560,39991688..39991761,39991850..39992023,39992255..39992359<br>,39992455..39992565,39992952..39993075|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008394:39984659..39993075
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source=RiceChromosome01
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008394:39984659..39993075
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source=RiceChromosome01
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgccgccggcgagaggcgggaggcgtgggagggggcgaggtaggcgaggtggacgcggaggcgccgcctctagggcgcgaggcgagaacgtcgtagacgtcgagccgatcaagctcggtgatgatgatgcgaaggtagatccacagacgaagtcacctaacgaagaaataacaagcgcggaggtttgcgaggtggagacctctgaggctagcccgcttggtgccccggaggaagatgaggggaagccaggttccactaggaacctgaagcgtcttcggaagacgatcacgatcgattccgcagccgctgaggagcatggggcagagagtgacgatgaagagtttgatgttcttgccacagcaagttgccaagagttggctccatgcagaaggtccaagcgcctaaggtgcaaaccaactaggaagaggtccaaaccaactgggaagagggatttgggtggcaaggagagtgaagatgatgtatttgcaaatagctcgagcagttcccaggatgacgccgggaagttagcttctagaagatcaaagcgtctcagggagaggcttacatctgattattttgatggtgatatgaaaattgttcggctccccgccgaggatcaaaacgccttcggaacagactgggccccagaaatatttcatatgctgatgatgatagcgacaccgatgatacatgttacattaactactgaaattaccacagatcgcaagaagattgtcccatgcaggagaacgtcaaagcgcctacaggagaagcggaaagctcatgatgtttcagaggagagttacactgaagcttcgtcttgcatgttgtcgacttcttcttcatcagatgatgaattattgcacaattctataaaacctggcagacgtaattcgggtggacctagttgttcgatctgtaagattggaattgcctgctctttcctcatcaaatgcaagaattccacttgttctcgtagcttccacaccttttgtcttgatcctcctttgcaagagattataggcacctgggaatgttcttggtgcaaaagcaatgcagcaccagcagtcaaggtgacagaagtgttaacatcaaaaaaaatccaaagacttgttggccacagacgaattcttcaggaggcagatttccagtatcaattcctcgtgaaatggcaatctctttctcatcatcatgactgctgggttccgcttgaatggcttcatgtatctgatcctttacgagtacagagctatctaaacaagaactgcttgcctaaggaagtttattcagaggatcaaaggaagcttgagtggtttgaagtagatcatgccattgcatgtcggaggaagttccatcatgaaggtttatgtgatgtcttggctactttccaggataaccaagatttcgacgggtatgagttccttgtgaaatggaagggccttgattactgtgaagctacatgggagccatgttgtaccgatggtgtgcaacaggctgtttctatgcttgtcaggaggcataaaaatgcttcaaaaagagttaacatcagccaaacatgtctagatggatcaaaaatagaagaggtgcactgtggtgctctatatgactatcaacttcaaggtttacaatggttaatagataacttcaaaactaggagaagcgttattcttgctgatgaaatgggtcttgggaaaaccgttcaagttgtttgctttctgtaccacattattaaggaaagtttgactgcatccccagcattgatccttgctccaaagagcatcctcctgcaatgggaaaaggaattttgccagtgggctagtgatcttaatgttattgtttatcaaggagacagagactctcgaaagtgtatccaagtccatgaaatgtactcttctgatgggaaacctttatttgatgctctagtgacgagttatgagtttgtccaaattgacaaggcagttctacagaaattcaagtggtctacaattgtcattgacgaggctcacagaatgaagaagcttgactgcaaccttgcagcttgcctaaaacgatactgctctgaatttcggttgctccttacgggaacaccgttacaaaataacatcatggaactgttttctttgcttcattatattgatccggatgagttctctgatccaaaggctgatggattgttctcaccaattgaatctggaagggatttgacaatggatgaaaaagttgctaggattcacaatattttaaagcccaggatgttgcggagaatgaaatctgatgttctaacagattctatgccagtaaagaagtgggttgaagttccatgtgcacttgcagattcccagagagaactttacattaatattttagagaggaattactcaaagcttaacagtgccattcggaatggcagaaaactttctctgaacaacatacttatggaactcagaaaatgctgcaatcatccagtaggacttgaagttggacagcaagcaactgaagatgtgtttttatcacttattgcttcatcaggcaaacttcaacttcttcataagttgctcccaagattgaaagaaaggggaaatcgtgtactgattttctcgcagatgaccaggatgcttgacattcttgaggattttctttgttccctgggatacaaatatgcacgcatcgatgggcagacatcactctctgctaggcaggagagcatagaagagtacaaaaacattgatagtgaaacatttattttcttgatgtcaactcgtgctggtggcatgggagttgacctgcctggtgcagatagggtaattatatacgatcctgacttcaatccatttatggacttgcaagcacaatctcgggctcatcggatcgggcagacaagaccagtggttgtttaccaactcattacaaagtgttctgtcgaggaaaagatactgcagaagtcaaagcagaagttggccatcgaaaatatgttgatgaactcttccaagaagccaagtgctgatgagttgcagtctatattactccatggagcaaagacaattgtggacaggaagatcagtgcaacatccatccattatgacaatgaagccattgagaatctcctcaagttagacccttccactggtgagaaatgctcgtcggatgataacggttatcttggcagcattgtgagctttgctcatggcgtcgaggatgaagcaccttcttccccaaaggttgaggatctgaaagttctcaagcctgctactcccaaggttgatctcggccgtgggaagaggcaaaggaaagtcgtgaactacgctgacgaggttgagaatgaagacagtgatgatatgtatgccccggaaggttcgtcgacttccgaattcagcagttcgtcctccgatgatgaaactgacagcgctctgcagctgcaaatagttacagtaccggacattgatgcagattag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MPPARGGRRGRGRGRRGGRGGAASRARGENVVDVEPIKLGDDDA                    KVDPQTKSPNEEITSAEVCEVETSEASPLGAPEEDEGKPGSTRNLKRLRKTITIDSAA                    AEEHGAESDDEEFDVLATASCQELAPCRRSKRLRCKPTRKRSKPTGKRDLGGKESEDD                    VFANSSSSSQDDAGKLASRRSKRLRERLTSDYFDGDMKIVRLPAEDQNAFGTDWAPEI                    FHMLMMIATPMIHVTLTTEITTDRKKIVPCRRTSKRLQEKRKAHDVSEESYTEASSCM                    LSTSSSSDDELLHNSIKPGRRNSGGPSCSICKIGIACSFLIKCKNSTCSRSFHTFCLD                    PPLQEIIGTWECSWCKSNAAPAVKVTEVLTSKKIQRLVGHRRILQEADFQYQFLVKWQ                    SLSHHHDCWVPLEWLHVSDPLRVQSYLNKNCLPKEVYSEDQRKLEWFEVDHAIACRRK                    FHHEGLCDVLATFQDNQDFDGYEFLVKWKGLDYCEATWEPCCTDGVQQAVSMLVRRHK                    NASKRVNISQTCLDGSKIEEVHCGALYDYQLQGLQWLIDNFKTRRSVILADEMGLGKT                    VQVVCFLYHIIKESLTASPALILAPKSILLQWEKEFCQWASDLNVIVYQGDRDSRKCI                    QVHEMYSSDGKPLFDALVTSYEFVQIDKAVLQKFKWSTIVIDEAHRMKKLDCNLAACL                    KRYCSEFRLLLTGTPLQNNIMELFSLLHYIDPDEFSDPKADGLFSPIESGRDLTMDEK                    VARIHNILKPRMLRRMKSDVLTDSMPVKKWVEVPCALADSQRELYINILERNYSKLNS                    AIRNGRKLSLNNILMELRKCCNHPVGLEVGQQATEDVFLSLIASSGKLQLLHKLLPRL                    KERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIEEYKNIDSETF                    IFLMSTRAGGMGVDLPGADRVIIYDPDFNPFMDLQAQSRAHRIGQTRPVVVYQLITKC                    SVEEKILQKSKQKLAIENMLMNSSKKPSADELQSILLHGAKTIVDRKISATSIHYDNE                    AIENLLKLDPSTGEKCSSDDNGYLGSIVSFAHGVEDEAPSSPKVEDLKVLKPATPKVD                    LGRGKRQRKVVNYADEVENEDSDDMYAPEGSSTSEFSSSSSDDETDSALQLQIVTVPD                    IDAD</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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DNA = <dnaseqindica>7780..8417#7666..7693#7418..7538#7170..7282#6982..7064#6558..6620#6234..6388#5908..6077#5299..5387#4992..5184#4709..4833#4013..4419#3569..3633#2796..3074#2643..2716#2196..2247#2015..2122#1516..1617#1315..1388#1053..1226#717..821#511..621#1..124#atgccgccggcgagaggcgggaggcgtgggagggggcgaggtaggcgaggtggacgcggaggcgccgcctctagggcgcgaggcgagaacgtcgtagacgtcgagccgatcaagctcggtgatggtgagtaggctggatctgggttctggacgcgatcggttttgggggattttgttcgggctagtgatcgatctgggggttttgggggtttttgttactgtgcgtttggttggttcgagagtttgtaaaatcaaaccgttggggattcggattttattaggggatttctggtggattttttttgggttcaggattgtaaggaagtagcattgctgtttttacgtcctccgatcggttcttgatgaggctgggaacggtttcccccctccatttgtgtgctcttcgcgtatttggaggagagcgctatattctgtggcggaagtatgaaatacatttttgatcaaggcgttcgaaactccgtaacattctgatccccacatatttggcagatgatgcgaaggtagatccacagacgaagtcacctaacgaagaaataacaagcgcggaggtttgcgaggtggagacctctgaggctagcccgcttggtgccccggaggaaggtgagattgaaagttcaaacttctcggacggcacggggttggtaatttgttatacccttatcgtttcggcttaatcccggtttcgatttatgcagatgaggggaagccaggttccactaggaacctgaagcgtcttcggaagacgatcacgatcgattccgcagccgctgaggagcatggggcagagagtgacgatgaaggtgagtgacggagtttgcttagctgacaatttctcggaattacgggtgccgcttgtcctgttaatgtgtagtacggttgtttgcattgtgttcaccttggttgtgctcagttttgatttgttttggcaaaatgaacactatataaaactccagatgttggtatttgcaatattagtctagaatgttgtatagctagtcattattattgtttgttttgacctgttgatttagagtttgatgttcttgccacagcaagttgccaagagttggctccatgcagaaggtccaagcgcctaaggtgcaaaccaactaggaagaggtccaaaccaactgggaagagggatttgggtggcaaggagagtgaagatgatgtatttgcaaatagctcgagcagttcccaggatggtaacagtgttatttacaatatattctgtcttgctgatcctaataaatttgtttggttgaagatttattccagattgatattttacagacgccgggaagttagcttctagaagatcaaagcgtctcagggagaggcttacatctgattattttgatggtgatgtgggtgaagacagacaccctgggaagtagctctgatgattatggtattgttacaattctcaactattgcatgatttctgatatgctgccagtctgctactacaaatgtaaaatttgcattatgtagatgaaaattgttcggctccccgccgaggatcaaaacgccttcggaacagactgggccccagaaatatttcatatgctgatgatgatagcgacaccgatgatagtaagtgggcaccctttgttatggcttgacataattgacccttttgtttgcagatcatgtgattttgtaattaacttcaatccagtttatttgggaaattggataacttgtagtttctcttctgctagaaagtcttaattgacataattaaaaaatactttgaaatattgtttaaccaaggatgcatttaaaacaatgtgaatagagtttttttacggaatggaagaaactatctattttcctcaatgcattctttttcaatatatatcttcattgatttgtgcactatgtgaaacttgcacctttcctatttacacgagcagaaagattaggacctaacagttgaatttattcccttctgtatagctaatatacaaataacataaccttgtttaagcatgttacattaactactgaaattaccacagatcgcaagaagattgtcccatgcaggagaacgtcaaagcgcctacaggagaagcggaaagctcatgatgtttcagaggtaagttaactaacaaaagaactcgacctactgttcttcatgaagtaataaatatctcatcgaaccttttcaggagagttacactgaagcttcgtcttgcatgttgtcgacttcttcttcatcaggtaataactaatcattttatgatcgataaatgtatcacctactttataatttaatatgattttgtggtcaagagattattgcaatcttgcattgtgcacaattaattaatatcaccgtacaaatatgtaaaatacctaggaaatattttgttttttactcctacctgttatacatggaagtgcgaagcatcaatgatccagagtcacatctaaacacattcaatattgttgatcacctttattcaatgcatttgttgttgcttgcatctataatatcgcatgaattgacaaccattccttctgtgcttcttaatgatttgtgtggaacctcagaatgcttgtcgtaaagttgatattacgtcgtgcatgtttcgctaatgacttgtgtctttcagatgatgaattattgcacaattctataaaacctggcagacgtaattcgggtggacctagttgttcgatctgtaaggtttgtcagcagttctgatttattaattttctacccccccccaatctttacatgaaatcctaactgattttttttgcagattggaattgcctgctctttcctcatcaaatgcaagaattccacttgttctcgtagcttccacaccttttgtcttgatcctcctttgcaagagattataggcacctgggaatgttcttggtgcaaaagcaatgcagcaccagcagtcaaggtgacagaagtgttaacatcaaaaaaaatccaaagacttgttggccacagacgaattcttcaggaggcagatttccagtatcaattcctcgtgaaatggcaatctctttctcatcatcatgactgctgggtatgttaaccttcttgctcaatctatatttggtgtctttttgaatgacttatctttgctgtctttttttttctttttctgtaaggcaataggtgtttgacttttcctttttctgtaaggcatacttgctagggaacctccctctaccaacacctttcttgtttgtagcagtacattatattgagtttctttgaactggtaccttgcattgtatatttcatttctttcaagtcatgaaactttgtattagcccttgctgctacaactaaaaaaatgtcatgctgcagctgctacactttgatttctattttaatgcaaacatacacatatttggcgtattcacaaaaaaaaaaacggcatcttcctaatgtttgtttatgatgttagaattgtatcctgccacactttgcctaatatttattatgtaattgctatacttgatgtggaccatgcaaatattgttccctagacacttaattatctactctctgtaggttccgcttgaatggcttcatgtatctgatcctttacgagtacagagctatctaaacaagaactggtaaatcttctcagtttcatgtttttctgtctaccgcctccagtgtaaagtttcttgtgttattttcttgttacatgtatttatcttttataattttttttgtgttcgtcaatgttgctaaattttttcttggatatactagttgcacataatctcgtacctgagtaatcgttgttcatatcattagcaaattaataatatgagcccctactaattttctaccttttttttcattaatcattactgagctattctggttgaacaccatgttgatgtttgccatttttaaaacaatcttgtttgtttataatcttaccagctgtgttctctagtgcaccatagtgcttatttttgttcttgtttgtgaacattgcaacagcttgcctaaggaagtttattcagaggatcaaaggaagcttgagtggtttgaagtagatcatgccattgcatgtcggaggaagttccatcatgaaggtttatgtgatgtcttggctactttccaggataaccaagatttcgacgggtatgagttccttgtgaaatggaagggccttgattactgtgaagctacatgggagccatgttgtaccgatggtgtgcaacaggctgtttctatgcttgtcaggaggcataaaaatgcttcaaaaagagttaacatcagccaaacatgtctagatggatcaaaaatagaagaggtgcactgtggtgctctatatgactatcaacttcaaggtttacaatggttaatagataacttcaaaactaggagaagcgttattcttgctggtatgtacataaactctaaatacataatccatgatgcacttgtacagttgtaccttaccaaattataatgcaccaataatacacatgtaaagaattatgctgatcagtttttattttgttgttttgagataatctgatttatcatgatgcttgtgaactgtataattatgtagcgtctctttgatgttttctttatttgtttggcattgtcttgatggaaaaatagcttgtacaactcttatttcatgacaaaactatgataatggggtatgttctgctctattggcagatgaaatgggtcttgggaaaaccgttcaagttgtttgctttctgtaccacattattaaggaaagtttgactgcatccccagcattgatccttgctccaaagagcatcctcctgcaatgggaaaaggtttgtatatagttatgtgatattctgccatattatactgtatattatataaatgaatttaaaattttaccctgaatcctttttttgatattgcatttcagtttacatcaaatatgttgcattaatcctattttttggatgcatgttttgtgctctaggaattttgccagtgggctagtgatcttaatgttattgtttatcaaggagacagagactctcgaaagtgtatccaagtccatgaaatgtactcttctgatgggaaacctttatttgatgctctagtgacgagttatgagtttgtccaaattgacaaggcagttctacagaaattcaagtggtctacaattgtcagtaagttttttcttagatgaagtcccccattatttggtgttcacttgccggcattagtgtattgtctctgttcttttcttgtaacacttgagcatttccccactttcacttcagttgacgaggctcacagaatgaagaagcttgactgcaaccttgcagcttgcctaaaacgatactgctctgaatttcggttgctccttacggtatgtactgcctacttgacctgtaatttcttgtccttaattatttcttggaattttagaattggtttgttccttgtcactagtttgattattagtagtcatctgggcatgaggttttgaaagtgagatgcctggtatagccagcattcaaccatagtgagtgcccataatactttaaaaggggtgtgcattactgtagctgaggcatggctcgctcctactgctccatgcatcgtatgatttggggactaggattttaaatccattatctgaaaatggttcgcttctgtggtctttctgaagcaacttaatcctgtgctagagcctaatcaagtgctatatagccgctagagcctatataacatagagagatctggttagccctttttacagatatcatatatagccgattctttctccttggctgtcagcgtagtaattcttacgaagtgctttacaattgccctttctttaaaagaactatgttctgatcctggttcctcttcctttcactgtacagggaacaccgttacaaaataacatcatggaactgttttctttgcttcattatattgatccggatgagttctctgatccaaaggctgatggattgttctcaccaattgaatctggaagggatttgacaatggatgaaaaagttgctaggattcacaatattttaaagcccaggtgaatactctgaaataagtactatatatgtttaatatcttggacacggatatttttttgccgggttggccggaaggtttggtcgaccaatttcattattaaagaagggtattaaaaacaattgaacacggatcttaagtttcttgtttttgctaggatgttgcggagaatgaaatctgatgttctaacagattctatgccagtaaagaagtgggttgaagttccatgtgcacttgcagattcccagagagaactttacattaatattttagagaggaattactcaaagcttaacagtgccattcggaatggtgagttaagcgttctgctcttttttcatgctctggtaaaattttaagtcagattcactttgtaaaagcatatttgtccctatgaattacgtatgggaatatgaggtttttcaaatccctttaattacgtatggaaataacactgttagtcttgtttgtacttttgcaggcagaaaactttctctgaacaacatacttatggaactcagaaaatgctgcaatcatccagtaggttttactttctgttttgttgatcagatgcagaacttggtctcttttctcttagatgtaggaattgggtgtttttgcttttccgagtctctcattttgacagtgatttgtgtgcagtggttacagaaaatttgtagcaaacgagaagcttaaaattggctttaatgtatcagtttgttaaactccattcttacaatcctgccttctatacaaggaccactagaccaggccttgctccctccgatcacccacaagctcacaacaaagagccctttttaagtagatgtgctgtttgttgtgcatgttaaatttttctgctgtcctaagatgctaagattttgcctttcagtatctatttccaggacttgaagttggacagcaagcaactgaagatgtgtttttatcacttattgcttcatcaggcaaacttcaacttcttcataaggttctttcgagacttcatattggaccttatattgctatcatatcttagcactgcacctgaagtttaaactgctagaaataacactgctcaattgctaaattgcagttgctcccaagattgaaagaaaggggaaatcgtgtactgattttctcgcagatgaccaggatgcttgacattcttgaggattttctttgttccctgggatacaaatatgcacggtatgcttcattcgtctaccttctatcaattctctaaattatatgcttcagactttcgctgctcttttccttgtatatctagtaattgaatgacacttcttttggccatttcatggctgtgttaacacttggcagcatcgatgggcagacatcactctctgctaggcaggagagcatagaagagtacaaaaacattgatagtgaaacatttattttcttgatgtcaactcgtgctggtggcatgggagttgacctggtaatgtattatcatatcaacttagttctttcagttgaaactgttagcctgtagggcaagctcttaaccagcaactgcaatagtatgattatgcctctggactgacaaacatcattataatttgcagcctggtgcagatagggtaattatatacggtaagtggttttaaatgttttcattcactgctaattatataatttgcaagtggatacttgcactgatttggccttcctatttccagatcctgacttcaatccatttatggacttgcaagcacaatctcgggctcatcggatcgggcagacaagaccagtggttgtttaccaactcattacaaagtgttctgtcgaggaaaagatactgcagaagtcaaagcagaagttggccatcgaaaatatgttgatgaactcttccaagaagccaagtgctgatgagttgcagtctatattactccatggagcaaagacaattgtggacaggaagatcagtgcaacatccatccattatgacaatgaagccattgagaatctcctcaagttagacccttccactggtgagaaatgctcgtcggatgataacggttatcttggcagcattgtgagctttgctcatggcgtcgaggatgaagcaccttcttccccaaaggttgaggatctgaaagttctcaagcctgctactcccaaggttgatctcggccgtgggaagaggcaaaggaaagtcgtgaactacgctgacgaggttgagaatgaagacagtgatgatatgtatgccccggaaggttcgtcgacttccgaattcagcagttcgtcctccgatgatgaaactgacagcgctctgcagctgcaaatagttacagtaccggacattgatgcagattag</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051531.1 RefSeq:Os01g0881000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 05:04, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

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Evolution

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Labs working on this gene

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References

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Structured Information