Difference between revisions of "Os01g0914400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0914400| Description = Conserved hypothetical protein| Version = NM_001051715.1 GI:115441800 GeneID:4324345| Length = 1237 bp| Definition ...")
 
 
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{{JaponicaGene|
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The rice '''''Os01g0914400''''' was reported as '''''EPFL9''''' in 2017 <ref name="ref1" /> by researchers from UK and USA.  
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GeneName = Os01g0914400|
 
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Description = Conserved hypothetical protein|
 
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Version = NM_001051715.1 GI:115441800 GeneID:4324345|
 
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Length = 1237 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0914400, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os01g0914400''''' '''''<=>''''' '''''EPFL9'''''
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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===Function===
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|
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*gene EPFL9 (Epidermal Patterning Factor like-9, a positive regulator of stomatal development in Arabidopsis) orthologue in rice.  
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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AP = Chromosome 1:41601238..41602474|
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CDS = 41601304..41601418,41601543..41601616,41602031..41602213|
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GCID = <gbrowseImage1>
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You can also add sub-section(s) at will.
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name=NC_008394:41601238..41602474
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source=RiceChromosome01
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==Labs working on this gene==
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preset=GeneLocation
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*International Rice Research Institute, DAPO, 7777 Metro Manila, Philippines
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</gbrowseImage1>|
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*Department of Molecular Biology and Biotechnology, University of Shefeld, Shefeld S10 2TN, UK
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GSID = <gbrowseImage2>
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*Department of Biology, University of North Carolinaat Chapel Hill, Chapel Hill, NC, USA
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name=NC_008394:41601238..41602474
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*Departamento de Biologıá Molecular de Plantas, Instituto deBiotecnologıá, Universidad Nacional Autónoma de Mexico Cuernavaca, Cuernavaca, Mexico
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source=RiceChromosome01
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*Department of Animal and Plant Sciences, University of Shefeld, Shefeld S10 2TN, UK
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preset=GeneLocation
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</gbrowseImage2>|
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==References==
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CDNA = <cdnaseq>atggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgtttcctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacagactatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaacatcaaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtga</cdnaseq>|
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<references>
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AA = <aaseq>MANACPTSTTSSLPLFFLFCFLLFSHARCNQGHHGSISGTDYGE                    QYPHQTLPEEHIHLQENIKVLNKERLPKYARRMLIGSTAPICTYNECRGCRFKCTAEQ                    VPVDANDPMNSAYHYKCVCHR</aaseq>|
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* <ref name="ref1">
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DNA = <dnaseqindica>67..181#306..379#794..976#gttgcttctctaatccaggcacaccaccatcctcccattctctatccatttgtttgaagaagggttatggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgtttcctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacccctttgcatcagattgatatcttgtcttttcttctgttctcctgcatctattaactgtgatttaggttgacatgataaaacctatgtatttaaatgtttcaatttcatatgatgtcaaggtacagactatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaacatcaaggtacatatgccatcttgctattacaaagtatgtaattaattgagttttgtgtttttctgttcctcaagtatgttttcttaaaactttagttttatgttttattatgttcattatatatgtcaaggaaaaaagctttcccccaactgtcagcttccttggcgcataccatatagttctggatggacttttcagtaggaagaaatggttgcatctatcaactgtgcactgcttggcatcttttgctaggatgagaaaatgattggtagcaacttgcctcccatcttttctcctaaagtagtatgaaaagacttaagaacaagaccaaacaaacatgaatgccaaagttaaatcagaaagtatgtaaatatctggaagatactatggttaagatgatcttcaaatgtatgccattaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtgatcattaataattaagaggagcttctgttatgagtagtagtttgcatccattttattctctttttcccccttctacccttctaggctcaaaaggttcattttttccccttttgttttaacaagtggccagctagtagaggattagagggcattttgtattttaagatgttcaggttgtggactggtaattttggaagtaaatgttaaaaaatttgaaaaacagcttatttatactattgtgcagacaaaatgttccttgctt</dnaseqindica>|
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Yin X, Biswal AK, Dionora J, Perdigon KM, Balahadia CP, Mazumdar S, Chater C, Lin HC, Coe RA, Kretzschmar T, Gray JE, Quick PW, Bandyopadhyay A. CRISPR-Cas9 and CRISPR-Cpf1 mediated targeting of a stomatal developmental gene EPFL9 in rice. Plant Cell Rep. 2017 May;36(5):745-757. doi: 10.1007/s00299-017-2118-z. Epub 2017 Mar 27. PubMed PMID: 28349358.
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051715.1 RefSeq:Os01g0914400]|
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</ref>
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}}
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</references>
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[[Category:Genes]]
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[[Category:Japonica mRNA]]
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==Structured Information==
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[[Category:Oryza Sativa Japonica Group]]
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 03:09, 22 May 2017

The rice Os01g0914400 was reported as EPFL9 in 2017 [1] by researchers from UK and USA.

Annotated Information

Gene Symbol

  • Os01g0914400 <=> EPFL9

Function

  • gene EPFL9 (Epidermal Patterning Factor like-9, a positive regulator of stomatal development in Arabidopsis) orthologue in rice.


You can also add sub-section(s) at will.

Labs working on this gene

  • International Rice Research Institute, DAPO, 7777 Metro Manila, Philippines
  • Department of Molecular Biology and Biotechnology, University of Shefeld, Shefeld S10 2TN, UK
  • Department of Biology, University of North Carolinaat Chapel Hill, Chapel Hill, NC, USA
  • Departamento de Biologıá Molecular de Plantas, Instituto deBiotecnologıá, Universidad Nacional Autónoma de Mexico Cuernavaca, Cuernavaca, Mexico
  • Department of Animal and Plant Sciences, University of Shefeld, Shefeld S10 2TN, UK

References

  1. ↑ Yin X, Biswal AK, Dionora J, Perdigon KM, Balahadia CP, Mazumdar S, Chater C, Lin HC, Coe RA, Kretzschmar T, Gray JE, Quick PW, Bandyopadhyay A. CRISPR-Cas9 and CRISPR-Cpf1 mediated targeting of a stomatal developmental gene EPFL9 in rice. Plant Cell Rep. 2017 May;36(5):745-757. doi: 10.1007/s00299-017-2118-z. Epub 2017 Mar 27. PubMed PMID: 28349358.

Structured Information