Difference between revisions of "Os01g0926700"
(Created page with "{{JaponicaGene|
GeneName = Os01g0926700|
Description = Conserved hypothetical protein|
Version = NM_001051799.2 GI:297598225 GeneID:4327243|
Length = 3012 bp|
Definition ...") |
Liming Pan (talk | contribs) |
||
| (2 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os01g0926700''''' was reported as '''''OsIRX10''''' in 2013 <ref name="ref1" /> by researchers from China. | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | + | ==Annotated Information== | |
| − | + | [[File:147-Os01g0926700.png|right|thumb|427px|'''Figure 1.''' ''Subcellular localization of OsIRX10..<ref name="ref1" />.'']] | |
| − | + | ===Gene Symbol=== | |
| − | + | *'''''Os01g0926700''''' '''''<=>''''' '''''OsIRX10''''' | |
| − | + | ===Function=== | |
| − | + | * The loss of '''''OsIRX10''''' function results in short culms and leads to a reduced plant size. | |
| − | + | * The Osirx10 mutant displays higher enzymatic cell wall saccharification efficiency, indicating that cellulose is more accessible in the mutant, which demonstrates that manipulating the xylan content in grass cell walls can facilitate sugar extraction for biofuel production. | |
| − | + | ||
| − | + | ===Subcellular localization=== | |
| − | + | * The subcellular localization of '''''OsIRX10''''' with C-terminally fused yellow fluorescent protein (YFP) and found that the '''''OsIRX10'''''–YFP signal coincided with the GmMan1–CFP signal, the α-mannosidase I cis-Golgi marker from soybean (Glycine max) (Figure 1F). * This result demonstrates that '''''OsIRX10'''''–YFP is Golgi-localized. | |
| − | + | ||
| − | + | You can also add sub-section(s) at will. | |
| − | + | ||
| − | + | ==Labs working on this gene== | |
| − | + | * Department of Plant Pathology and The Genome Center, University of California, Davis, CA 95616, USA | |
| − | + | * Joint BioEnergy Institute, Emeryville, CA 94608, USA | |
| − | + | * Rice Research Institute, Sichuan Agricultural University at Wenjiang, Wenjiang, Chengdu 611130, China | |
| − | < | + | * Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA |
| − | + | * Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, DK-1871 Frederiksberg, Denmark | |
| − | + | * Department of Botany and Microbiology, University of Oklahoma, Norman, OK 73019, USA | |
| − | + | ||
| − | + | ==References== | |
| − | + | <references> | |
| − | [[Category:Genes]] | + | * <ref name="ref1"> |
| − | + | Chen X, Vega-Sánchez ME, Verhertbruggen Y, Chiniquy D, Canlas PE, Fagerström | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | A, Prak L, Christensen U, Oikawa A, Chern M, Zuo S, Lin F, Auer M, Willats WG, |
| − | [[Category:Japonica | + | Bartley L, Harholt J, Scheller HV, Ronald PC. Inactivation of OsIRX10 leads to |
| − | + | decreased xylan content in rice culm cell walls and improved biomass | |
| − | + | saccharification. Mol Plant. 2013 Mar;6(2):570-3. doi: 10.1093/mp/sss135. Epub | |
| + | 2012 Nov 23. PubMed PMID: 23180670. | ||
| + | </ref> | ||
| + | </references> | ||
| + | |||
| + | ==Structured Information== | ||
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] | ||
Latest revision as of 15:46, 20 October 2016
The rice Os01g0926700 was reported as OsIRX10 in 2013 [1] by researchers from China.
Contents
Annotated Information
Figure 1. Subcellular localization of OsIRX10..[1].
Gene Symbol
- Os01g0926700 <=> OsIRX10
Function
- The loss of OsIRX10 function results in short culms and leads to a reduced plant size.
- The Osirx10 mutant displays higher enzymatic cell wall saccharification efficiency, indicating that cellulose is more accessible in the mutant, which demonstrates that manipulating the xylan content in grass cell walls can facilitate sugar extraction for biofuel production.
Subcellular localization
- The subcellular localization of OsIRX10 with C-terminally fused yellow fluorescent protein (YFP) and found that the OsIRX10–YFP signal coincided with the GmMan1–CFP signal, the α-mannosidase I cis-Golgi marker from soybean (Glycine max) (Figure 1F). * This result demonstrates that OsIRX10–YFP is Golgi-localized.
You can also add sub-section(s) at will.
Labs working on this gene
- Department of Plant Pathology and The Genome Center, University of California, Davis, CA 95616, USA
- Joint BioEnergy Institute, Emeryville, CA 94608, USA
- Rice Research Institute, Sichuan Agricultural University at Wenjiang, Wenjiang, Chengdu 611130, China
- Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
- Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, DK-1871 Frederiksberg, Denmark
- Department of Botany and Microbiology, University of Oklahoma, Norman, OK 73019, USA
References
- ↑ 1.0 1.1 Chen X, Vega-Sánchez ME, Verhertbruggen Y, Chiniquy D, Canlas PE, Fagerström A, Prak L, Christensen U, Oikawa A, Chern M, Zuo S, Lin F, Auer M, Willats WG, Bartley L, Harholt J, Scheller HV, Ronald PC. Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification. Mol Plant. 2013 Mar;6(2):570-3. doi: 10.1093/mp/sss135. Epub 2012 Nov 23. PubMed PMID: 23180670.
