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| − | {{JaponicaGene|
| + | The rice '''Os01g0956700''' was reported as '''LCD''' in 2011 <ref name="ref1" /> by researchers from the Japan. |
| − | GeneName = Os01g0956700|
| + | <br> |
| − | Description = Conserved hypothetical protein|
| + | ==Annotated Information== |
| − | Version = NM_001051977.1 GI:115442324 GeneID:4325414|
| + | ===Gene Symbol=== |
| − | Length = 3871 bp|
| + | *'''Os01g0956700 <=> LCD''' |
| − | Definition = Oryza sativa Japonica Group Os01g0956700, complete gene.|
| + | <br> |
| − | Source = Oryza sativa Japonica Group
| + | ===Function=== |
| | + | *'''lcd''' may be useful for understanding Cd transport mechanisms and is a promising candidate rice line for use in combating the threat of Cd to human health. |
| | + | <br> |
| | + | ===Expression=== |
| | + | *'''LCD''' localized to the cytoplasm and nucleus, and was expressed mainly in the vascular tissues in the roots and phloem companion cells in the leaves. |
| | + | <br> |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Labs working on this gene== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | *Graduate School of Agricultural and Life Sciences, The University of Tokyo, Japan |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *POSTECH, Pohang University of Science and Technology, Korea |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, Japan. |
| − | |
| + | <br> |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| + | ==References== |
| − | AP = Chromosome 1:43957438..43961308|
| + | <references> |
| − | CDS = 43958694..43958737,43958829..43958913,43958999..43959444,43959558..43959682,43959761..43960011<br>|
| + | <ref name="ref1"> |
| − | GCID = <gbrowseImage1>
| + | Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice |
| − | name=NC_008394:43957438..43961308
| + | </ref> |
| − | source=RiceChromosome01
| + | |
| − | preset=GeneLocation
| + | </references> |
| − | </gbrowseImage1>| | + | <br> |
| − | GSID = <gbrowseImage2>
| + | ==Structured Information== |
| − | name=NC_008394:43957438..43961308 | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>| | |
| − | CDNA = <cdnaseq>atggtggaaaccacagttgatgttatgataagaaaaggaacaaacatgagactcgaaagctacgagtttttgagtgatttcaagcatggcaacgctgtggtactcctggactacacagagtccggaaacaaggggagtttcatcgtcacacaagttgatgggtcattcactgcctggtttgaaacaggtggaaaagagctctgctttgactcatctggtcatattactcagttatttaaagacatgattgtcgatttttacgatctgacctggagtttgcacaagaggcacttagtcatgcagaattttgtaaaggaaaatatatacgtcaaaatctttgatggcgtacccaaacttatgattctactaactgaagttaaattggttgatcagctagggccattcaaacaggactggagtcatgtccaaggcctcatgacttggtgtaaagaacaatctggtttaaaaatggactttcttaccaagagtttctatgatttcatcggatctaccgactgcacagtaatcaagctgagaaactaccctgatgattgggatgaaaaaaagaaaggtgattatttgctcacactcgcagaagtaaaccacggagttcttaaagataagttgaagagtagggatgattttcattggccgtttgtgaagctgcctaagctggagcagaacttaccaccaatgttacagcaaattcttagtggggagagacagatgaaaagaaagttcgacgtgacattcttttgtgattatatcaacctcttgagaaactcctacaagaaattcaatgaattaccagaaaatgttaaggctttatgcataaaccaggatggcttcattaaactgatagatgggtggtctcctgagttttggaccaagatctacgagaaaattgggtggccagattataatatctggaagtggccttgtaaaaaatag</cdnaseq>|
| |
| − | AA = <aaseq>MVETTVDVMIRKGTNMRLESYEFLSDFKHGNAVVLLDYTESGNK GSFIVTQVDGSFTAWFETGGKELCFDSSGHITQLFKDMIVDFYDLTWSLHKRHLVMQN FVKENIYVKIFDGVPKLMILLTEVKLVDQLGPFKQDWSHVQGLMTWCKEQSGLKMDFL TKSFYDFIGSTDCTVIKLRNYPDDWDEKKKGDYLLTLAEVNHGVLKDKLKSRDDFHWP FVKLPKLEQNLPPMLQQILSGERQMKRKFDVTFFCDYINLLRNSYKKFNELPENVKAL CINQDGFIKLIDGWSPEFWTKIYEKIGWPDYNIWKWPCKK</aaseq>|
| |
| − | DNA = <dnaseqindica>2572..2615#2396..2480#1865..2310#1627..1751#1298..1548#gtctagcctcccactaatcccggtgccttcttgatcccaccgatccccgtgctttcttctcttcggcatcgccacgaagcggagggtgccatcgcagcagccatcgccgacgagcggctcacggtcactgcggcctcggcaacgtccggcgatcgtcgtcgatccttaccttactccctcacgccccctaggtatgaagccgccgtactccaacccaacttctatcgcctttgaaaccctaggcaggtaggcggttgctttgccttcggtgcggttgttgtgctgactctctcctcgccctcgccctcgccctcgccctcaccctcgtcgccggcgattcctccgccgtactccaaccctagctgtcgcctttgaaaccctaagtaggcacctaattaagtgctaactctttctgaatgtaatatcacaaatctttcccaactaattcagtagcattcggttaagcccaacaccatacagttgttggtactgaaacttttttcccccttttccgttatcttcagaagtaacaatcagtcagttacttcagtaacctgacacttgtgttctgattgcctgatccaagttgtgatcttagttatctgcttcttagcttgtgaatacgagtaagtagtagtaaaattggtgtgttttggtagattttgcttgtaattcctagcggttggtaacttggtatattcataattcggctaaggtttgataaaagctgcagtgctgcacatcagcctttttttccctgtgcacatttgcttttcttgtgtttatgctacttgcttgatttattgctattgttcctttgctcctggaggtggccaggggtagcctgcctgcctgcctcattcatgttttctatcatttagtggctattcgctttgaagaaattaatgatttatgcagctgttcctttaaataattattggttaatcccttgaatttatagctgtctcctcgagaagaatcctgcttaagttgatttacctccgggtgtttacggtctttcaaattgctaagcataatcttgaactttccaagaaaaaaaacaggcctgcattaactagtgccagggcagcaataatggatttgtgcgacgacactcatttcccatgggaggtaatttttttaaaaccagaatcagccaagcgccaaatttatgataattattcttcgcatatgtataattttgttccttgcaggggtcccatactattgttggcagcaagcggaaagctaaggatttaatggcaaaaatctgaacttgtttaatggaacttataagatggtggaaaccacagttgatgttatgataagaaaaggaacaaacatgagactcgaaagctacgagtttttgagtgatttcaagcatggcaacgctgtggtactcctggactacacagagtccggaaacaaggggagtttcatcgtcacacaagttgatgggtcattcactgcctggtttgaaacaggtggaaaagagctctgctttgactcatctggtcatattactcagttatttaaagacatgattgtgtgagtatctttattgttgtccatatttttaactttcttcttgttatgttctctgaaatcatttttatttgtgtgaagcgatttttacgatctgacctggagtttgcacaagaggcacttagtcatgcagaattttgtaaaggaaaatatatacgtcaaaatctttgatggcgtacccaaacttatgattctactaactgaaggtatatatttgttgctagtaacttaatggaagttcacagttttttttttatatataaacaatggcaatataacttgtacactggattgaaaatgcgatttaaattttgtacagttaaattggttgatcagctagggccattcaaacaggactggagtcatgtccaaggcctcatgacttggtgtaaagaacaatctggtttaaaaatggactttcttaccaagagtttctatgatttcatcggatctaccgactgcacagtaatcaagctgagaaactaccctgatgattgggatgaaaaaaagaaaggtgattatttgctcacactcgcagaagtaaaccacggagttcttaaagataagttgaagagtagggatgattttcattggccgtttgtgaagctgcctaagctggagcagaacttaccaccaatgttacagcaaattcttagtggggagagacagatgaaaagaaagttcgacgtgacattcttttgtgattatatcaacctcttgagaaactcctacaagaaattcaatgaattaccagaaaatgttaaggtaattgcttaagatgtttccagattgaataataccttcttttactgcaggatttgttgtattcaaacatcttatgttttgacaggctttatgcataaaccaggatggcttcattaaactgatagatgggtggtctcctgagttttggaccaagatctacgagaaaattggtaaaaacagtctgtgcctttggttttaggccttcgtttgactgtgctctttttggaataggggatttatgacggtgttctctttttgcagggtggccagattataatatctggaagtggccttgtaaaaaatagctttagtgctttgcatttgaccagtgagtactgcattaatacttaatgtatgattcctgtacgctttcagttcaagatataaccttagttatcattgttctatgtttgagtaccttattagattgctgcatttatatagcttgtttgggatatggatttccatccctcaaggggatgtcccctcgttgattgtatgtcatctaaatagttataaaaaaatttaaaaaaattgacaacatagattaatatgaaatatatcatgagaactgtggtgctcaattgttaagaggtaatgatctccttgtgagggctaattttgtgccggtttggtcgttgctgtgtagtggtaggaggttgtgggtggcaagctgttatgaaactcagatgttttttttcttccttttcagtcttttgtatcagactctgtaattcctgcttcaggtccttgatctaaaaaaaaagttcaatgggctttggaaaaatctaatactttctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatctagatagatatatatgtctaggttcattaacatcaaaatgaatgtgggaaatgttagaatgacttacattgtgaaacggagtgagtaactgctactcaaattctatgcacaaagatttgtactgtccagatgaaaaaaagggaacttggtgtgttttgtgctctaatcctgaaaaaatgttcagcacattctctatgaatgtcctgttgcaaaattcacctggtgtgtttcccgtgatgcttgtggctggagttttctcccctctgcttttgaatcttgtaatttctggagtagttgggctagccggctccaaaaggaacagaatcaaaatcctttgctttgctgctgtttgtttatcaactttggctgatgggcaacgatatgttttttcaaacaaaaactgttatctactcccccctgactttgattttccgtgtcatttcctccttgtttaggaacactgcttgatctcaatgatggcgatgccggtgcccgcgctgacattctcaggacatatggtgctgttctgcaggtccgatccttagatggctcctgttaggagtttttggttcttagaattatgttagatgctatctcgaaactctcaagtaattttttgtcctcctgcatgaagcaaaacttagtgtattggttgaaaatctggcatgattgaatggagaactatcgagattcattactgtg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051977.1 RefSeq:Os01g0956700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
