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| − | {{JaponicaGene|
| + | The rice '''''Os09g0306800''''' was reported as '''''OsEMF2b''''' in 2014 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os09g0306800|
| |
| − | Description = The start codon is not identified.|
| |
| − | Version = NM_001069360.1 GI:115478459 GeneID:4346674|
| |
| − | Length = 12534 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0306800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | [[File: Os09g0306800.png|right|thumb|427px|'''Figure 1.''' ''Phenotype observation of wild-type plants, osemf2b heterozygous mutants, osemf2b homozygous mutants, OsEMF2b overexpressing transgenic plants, OsEMF2b RNA interference plants, and OsEMF2b complementation plants under LD (14 h light/10 h dark) conditions..<ref name="ref1" />.'']] |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | ===Gene Symbol=== |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *'''''Os09g0306800''''' '''''<=>''''' '''''OsEMF2b''''','''''EMF2b''''' |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| + | * '''''OsEMF2b''''' is a regulator of flowering transition and floral organ identity in rice. |
| − | AP = Chromosome 9:8491340..8503873|
| + | * '''''OsEMF2b''''' acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at '''''OsLFL1''''' and OsMADS4 in Rice. |
| − | CDS = 8491630..8491753,8491886..8491975,8492620..8492699,8492781..8492864,8494844..8494892<br>,8495014..8495140,8495698..8495834,8495904..8495950,8496026..8496085<br>,8496171..8496224,8496710..8496762,8498105..8498169,8498950..8499074<br>,8499207..8499266,8499570..8499706,8500637..8500705,8500789..8500945<br>,8501021..8501135,8503069..8503124,8503253..8503384|
| + | |
| − | GCID = <gbrowseImage1>
| + | ===Phenotypic analysis=== |
| − | name=NC_008402:8491340..8503873
| + | * The '''''OsEMF2b''''' T-DNA insertion mutations and RNA interference transgenic plants cause late flowering, whereas OsEMF2b overexpressing lines result in early flowering. The transcript levels of genes involved in rice flowering pathway differ in wild-type plants and osemf2b mutants. |
| − | source=RiceChromosome09
| + | * The transcripts of Ehd1, Hd3a, and RFT1 decrease, whereas the expression level of OsLFL1 increases in the osemf2b mutants under short-day and long-day conditions. |
| − | preset=GeneLocation
| + | * Chromatin immunoprecipitation analyses showed that '''''OsEMF2b''''' was directly associated with OsLFL1 and OsMADS4, such that the H3K27me3 was enriched on these target genes chromatin in WT but not in the OsEMF2b RNAi plants. |
| − | </gbrowseImage1>|
| + | |
| − | GSID = <gbrowseImage2>
| + | You can also add sub-section(s) at will. |
| − | name=NC_008402:8491340..8503873
| + | |
| − | source=RiceChromosome09
| + | ==Labs working on this gene== |
| − | preset=GeneLocation
| + | * College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China |
| − | </gbrowseImage2>| | + | |
| − | CDNA = <cdnaseq>taccagatgtgccgccaccagccaagggctcggctctctcccgatgagcagcttgcagctgaagaaagcttcgcattatactgcaagccggtcgagttgtataatatcattcagcgccgatccattaaaaatcctgcttttcttcaaagatgccttctttacaagattcacgcaagacggaagaagaggagcctgataaccatatcactttctggaggcacaaataaagaactgcgggcacaaaatatctttcctctttatgttctgttagctagacctactaataatgtttcacttgaagggcattctccgatatatcgattcagtcgtgcttgtttgttgacttcttttcatgaatttggaaataaagactacactgaagcaacattcgtcattcctgatgtgaagaacttagcaacctcccgagcttgcagccttaatattatccttatcagctgtggacgagctgagcaaacttttgatgacaataactgttctgggaaccatgtggaaggctctactctccaaaagcttgaagggaagtgtttctggggtaaaataccaatcgatcttcttgcttcatctttgggaaattgtgtgagcttaagtttgggacataccgtggaaatgtcttccacggttgagatgaccccaagcttcttagagccaaaatttctggaggatgacagttgcttgacattttgctctcagaaggttgatgctactggttcatttcaactgcaagttagcatatctgctcaagaggctggtgcaaaagacatgtccgagtctccttatagtgtttattcatataatgatgtgccaccttcgtcattgacacatattataaggttgagatctggcaatgtgctttttaactacaaatactacaataatactatgcaaaaaaccgaagtcactgaagatttttcttgcccattttgcttggtaccatgtggcagctttaagggtctaggatgtcacctaaacgcatcgcatgaccttttccattatgagttttggatatctgaagagtgccaggctgttaatgttagtctgaagactgattcttggagaacagagcttttggctgagggagttgatccaagacatcaaacattttcgtaccgctcaagatttaagaagcgtaaaagggtggaaatctcaagtgataaaattaggcatgtacatccacatattgtggattcaggatcacctgaagatgcccaggcaggatctgaagacgattacgtgcagagggaaaatggtagttctgtagcacacgcttctgttgatcctgctaattcattacacggtagcaatctttcagcaccaacagtgttacagtttgggaagacaagaaagctgtctgttgaacgagctgatcccagaaatcggcagctcctacaaaaacgccagttctttcattctcacagggctcaaccaatggcattggagcaagttttctcagatcgtgatagtgaagatgaagttgatgatgacattgctgattttgaagatagaagaatgcttgatgattttgttgatgttacaaaagacgagaaacttattatgcatatgtggaattcatttgttcggaaacaaagggtactagcggatggccatattccctgggcatgcgaagcattctcgcagtttcatggacaagaacttgtacaaaatccagctctactatggtgttggaggttttttatggtcaaactctggaaccacagtctactggatgcgcgagccatgaatgcctgcaacacaattcttgaaggctacctgaacggaagctcggatccaaagaaaaattga</cdnaseq>|
| + | ==References== |
| − | AA = <aaseq>YQMCRHQPRARLSPDEQLAAEESFALYCKPVELYNIIQRRSIKN PAFLQRCLLYKIHARRKKRSLITISLSGGTNKELRAQNIFPLYVLLARPTNNVSLEGH SPIYRFSRACLLTSFHEFGNKDYTEATFVIPDVKNLATSRACSLNIILISCGRAEQTF DDNNCSGNHVEGSTLQKLEGKCFWGKIPIDLLASSLGNCVSLSLGHTVEMSSTVEMTP SFLEPKFLEDDSCLTFCSQKVDATGSFQLQVSISAQEAGAKDMSESPYSVYSYNDVPP SSLTHIIRLRSGNVLFNYKYYNNTMQKTEVTEDFSCPFCLVPCGSFKGLGCHLNASHD LFHYEFWISEECQAVNVSLKTDSWRTELLAEGVDPRHQTFSYRSRFKKRKRVEISSDK IRHVHPHIVDSGSPEDAQAGSEDDYVQRENGSSVAHASVDPANSLHGSNLSAPTVLQF GKTRKLSVERADPRNRQLLQKRQFFHSHRAQPMALEQVFSDRDSEDEVDDDIADFEDR RMLDDFVDVTKDEKLIMHMWNSFVRKQRVLADGHIPWACEAFSQFHGQELVQNPALLW CWRFFMVKLWNHSLLDARAMNACNTILEGYLNGSSDPKKN</aaseq>|
| + | <references> |
| − | DNA = <dnaseqindica>12121..12244#11899..11988#11175..11254#11010..11093#8982..9030#8734..8860#8040..8176#7924..7970#7789..7848#7650..7703#7112..7164#5705..5769#4800..4924#4608..4667#4168..4304#3169..3237#2929..3085#2739..2853#750..805#490..621#aattagggtggggtggtaggcgaaattactaacttaccctcgccatttcgacgcctcctccgtggtgtcgtcgtgcgcgagctatgctgagtttgcccttgcccaccgcttccgcctccgccgatccccatccctcccgcgagcaggagcaggagcaggagcagggctagccgtcgttcctcctgctgcttccgccgcatccatcctggtgagcacatccccccgcccccaccgccgatccccatccatcgctcgtcctgccgcttccgccgcattcgttacgcatttttttctctctctctcgaattttcgttaaccctagcttctgttctagaaatttgccccatgaccttaatactagttacagtttgatggttcccgagaaggggtcccatgttagatccgccagtgctagtccatggtggtgcttgtatgcagggataataattggatgctgattttggttttttccaccccccggtccgcagataccagatgtgccgccaccagccaagggctcggctctctcccgatgagcagcttgcagctgaagaaagcttcgcattatactgcaagccggtcgagttgtataatatcattcagcgccgatccattaaaaatgtaaatgcttcttcctgaaattataaggcccatctttttaatgcagtttgcatcagcatatgcgcatgcaaacctttaacatggaagtgctctgggataccaattatgaactcgctgaatttttgcagcctgcttttcttcaaagatgccttctttacaagattcacgcaagacggaagaagaggtatgctttgactcgcaaccaaagattgtgcttattgccttattcaatgtctcagtaagcatggccaaaatgggttcgacataatgtataacaagaagctgtaaacattattatgtaatcttcttagtgcttaccatgtataacacctaattagataaatgagtgcattttctattgccatgctaggttagcataatgggtatatactagttgacacaaatccatgcaaagtaccagaaacaacgacacaagaccatcatatctgggccaataacctactccctctggtttaaaaaattcttgtcgttttaggcttggaaccagaggatgctaattgttgatgtgtttggttctatctgctgaccatcttggcttgtttgcccctgcatgcatgcatcccatcaaaacacaaaatccagtgctggattcaaatcactgggctacatcaaattattgattaactttagcacaggaccgtatttaatatgggtaaaacagggaatagacaccctaataaatcactccttggtatgtgagatcatatccaaatgtcaagaattttgcaaccgatgggagtaattaataaccattttttatggaaagtagatatgagaatttatattataagcatatacgataggcaaaataaatggatgagtaaaagacaagaaaatttgggtgttgtggctgccaatctgctcagcccatacacactctgcacgaaagattccaacatccagctgttcacctctcctatcctcaaaacgataaaagtaataagcaacacaatgcctgccgggtgctgagacaatatattggataaattccatcaataaaagtttttatagaattggataaattccattgataaaactgtctataaatttcctaaaaaaaactatcggataagaattgcagacacattcactcttggtctctctttccttttcttcaacaaagagccgctggctgttgagtaggacccattctgtacctttcgttctattttccctttcttctccttggaagtctttcttcaccccaacaaaaagagcaaggaatagaccatacgcacaagaaaagcaagaggttgtggcagagcgcagtgatgagagagaagctgaagaaagatgcttggtggtgagagtagaggagagccaccataaatggcaacccaggtcacgattgggagcagcaaagttgatccaggtcgcgactctagccttgatctggacagcaacccttggcaaccatgaccagcaaatcaggactatgtattgtggttgagggtcgtggcatcgacccgcaaatctggttgccttggaatagctgcccttgaatgctcgagtgtccatcttcattatagcttaggctaatattttaatccttcagtaactactgctaataatctccaatgcgaagatagataaaactgacttcaaagttcaatggccaaaataattgttttagttttttttttgaaaatcttgctatatcgtattcatgtcagatgtaaaccaggaagttctgtagtggtgagagtataatatgcacctacgtttaggccctttgaactgagccatgagaacactgggactgctggaaaatttactgctggcctgctgggatacccgtagctaagacaagcaattaccataaatttacacaaaagcacgacacatgtattgaagattaaaactgaacgtcacaaattcacaaatttcaaccaaatagctcagacacaagctggagaaataatccaaaaaacaatatatttttaattcgggattcaactacagttgggatcttgaactagatggttgcacaagaagttatgttggctcaattcaggggcaacctttgttgtaaactaataatgcattggaattgttgcatcatgaaagtactgaccagtttctgcttatgaatataggagcctgataaccatatcactttctggaggcacaaataaagaactgcgggcacaaaatatctttcctctttatgttctgttagctagacctactaataatgtttcacttgaaggggtaagtctaccatcatttaatttcttgtaacatgagattttaagcttgtgtttaccaaatgatcatgatgtgcagcattctccgatatatcgattcagtcgtgcttgtttgttgacttcttttcatgaatttggaaataaagactacactgaagcaacattcgtcattcctgatgtgaagaacttagcaacctcccgagcttgcagccttaatattatccttatcagctgtggtacagggtgcactctttgcaaccatttgctctttacatttctttgctgccataaaattttatttatttatttcttttggaaggacgagctgagcaaacttttgatgacaataactgttctgggaaccatgtggaaggctctactctccaaagtaagtttatggctgacaacttggtggcaggcacaaaaaaattgctagaataagaatgaacttgtgggtagccagattaattgaatggacacattaagggcatgtttagttgcctacagtactcccatgcagtgatttacccagttgttaaaaagtgtcgtaaagtttgataggggaaacaaacagaccctagccacacaacacgggtgtaccacactgtttggaactagcaaatggttggctagaatatattgcttctttatgttggaagattttgtttttttactcaggttcaaccagtgactggaatgagcacaaaggcatgtgcacaccctcttccttagtgttaaatgctcatatatctacactttctatggatatggagcaaactgtcacaacattctgaatccagctcatgcctgcctcaaattatttatcaaccaacccaatttgaaacagcctacactttgaagtggtaaacaactatatgcgacatgagaagccttgttcatgtggacttgtggggatcttatggcctagcttatttttactaaaaacccagaactaacaaactctcctactaaatgcattgctgcttttttgaatgaaaattgaatgtgtattgcggtcaaataaacaaactatcgtgaaacattatgttactagttttgccttttcggacagggttagacacattaataggctgtctatcgtgattaatttagatttcatgctttcaccctttgaaaggatcctcgcagttacagctactgcttatagcaaacatatatatagttttaaatatgtacctttaaaattcagtgtagaggcaaaagatgacgctcaaaaatcaaacatgcaaatatagttttgtacaattattctcttgttaaatggactaactatgaaccatgtgatgcattttgacagagcttgaagggaagtgtttctggggtaaaataccaatcgatcttcttgcttcatctttgggaaattgtgtgagcttaagtttgggacataccgtggaaatgtcttccacggttgagatgaccccaagcttcttagaggtatggccgacttttcctagtattaagctcagctgttcttaaagtatgtaccataacttatccatagtatttaagaaaagtatacatgaaccaccaccatttgcatcatatgaaacttgcttttgggaaaatagaacaccttaatctgtatatttttgcacatcatattccaaaagtacagttggtaaaatcccaaatcaaacaattaagttagcatgaaataaccagtgcaatttgggttctatacttcagctatttacagaaattgttctgcacatcatattccttttgttatgcatgcagccaaaatttctggaggatgacagttgcttgacattttgctctcagaaggttgatgctactgtaaggcccttcatgtctcttcctgtattgtttattaataaaatcatttccatcaaaaaaattatatgggtcagacaatagcgagtttatacacc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| + | * <ref name="ref1"> |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069360.1 RefSeq:Os09g0306800]|
| + | Xie, Shiyong, et al. "OsEMF2b acts as a regulator of flowering transition and floral organ identity by mediating H3K27me3 deposition at OsLFL1 and OsMADS4 in rice." Plant Molecular Biology Reporter 33.1 (2015): 121-132. |
| − | }}
| + | </ref> |
| − | [[Category:Genes]] | + | </references> |
| − | [[Category:Japonica mRNA]]
| + | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | ==Structured Information== |
| − | [[Category:Japonica Genes]] | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
