Difference between revisions of "Os11g0689000"

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(Created page with "{{JaponicaGene| GeneName = Os11g0689000| Description = Hypothetical protein| Version = NM_001075020.1 GI:115486688 GeneID:4351152| Length = 10064 bp| Definition = Oryza s...")
 
 
(3 intermediate revisions by 3 users not shown)
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{{JaponicaGene|
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The rice gene Os11g0689000 was reported as '''''PIKM''''' in 2008<ref name="ref1" /> by researchers from Japan.
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GeneName = Os11g0689000|
 
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Description = Hypothetical protein|
 
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Version = NM_001075020.1 GI:115486688 GeneID:4351152|
 
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Length = 10064 bp|
 
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Definition = Oryza sativa Japonica Group Os11g0689000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Gene Symbol===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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*'''''Os11g0689000 <=> PIK, PIKM
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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−
|
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===Function===
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Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
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[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
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AP = Chromosome 11:29823840..29833903|
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CDS = 29833224..29833293,29833391..29833596|
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===Mutation===
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GCID = <gbrowseImage1>
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[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
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name=NC_008404:29823840..29833903
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source=RiceChromosome11
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===Expression ===
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preset=GeneLocation
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[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
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</gbrowseImage1>|
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GSID = <gbrowseImage2>
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name=NC_008404:29823840..29833903
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===Evolution===
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source=RiceChromosome11
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preset=GeneLocation
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You can also add sub-section(s) at will.
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</gbrowseImage2>|
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==Labs working on this gene==
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CDNA = <cdnaseq>atggcagtggcatggattgatgaccagtcttcagaaattccaaccactagccaaacgcatctacgacccacggcacaaacaccgggacgtgtgcctgcagattgcggtgccggcggcggcggcggcgatctggttcgcaccgtcgactgggcttcgattcttcgtcggcctaattcagattggaatctcatcagatacttcatgtggttcctgtgcttgaagccaagtgctggttcttcattggcatccatcgaggattggatgtgcggaaattag</cdnaseq>|
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*NARO, National Institute of Crop Science, Tsukuba, Ibaraki 305-8518, Japan,
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AA = <aaseq>MAVAWIDDQSSEIPTTSQTHLRPTAQTPGRVPADCGAGGGGGDL                    VRTVDWASILRRPNSDWNLIRYFMWFLCLKPSAGSSLASIEDWMCGN</aaseq>|
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*Plant Disease Resistance Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan, Institute of the Society for Techno-Innovation
−
DNA = <dnaseqindica>611..680#308..513#gattccacagctgccaacgcaacgccgacgagaaatccggcgaaccccaccacggccatggattcgccgcctccgccggaaactcgagcgccgcggcggcggcggcggcggcgggcgggtaggagcccacgaggaggggatattgccggtggcggcgcttccttcaccctctcggttgcgtatttgtgctcgcgttcttatctcggccatcgccgtcgccgtcgccgtcgccgccgcggccagatcccctttcccagggaagcgcggagtagagtacatagccagccggccagccagccagccagccatggcagtggcatggattgatgaccagtcttcagaaattccaaccactagccaaacgcatctacgacccacggcacaaacaccgggacgtgtgcctgcagattgcggtgccggcggcggcggcggcgatctggttcgcaccgtcgactgggcttcgattcttcgtcggcctaattcagattggaatctcatcagatacttcatgtggtatactttgattgctgtgctgctgaattgcatgatgtgtttgtgttggtcgatgggacagagcttgatactttgtgtactgctcctccttgttcaggttcctgtgcttgaagccaagtgctggttcttcattggcatccatcgaggattggatgtgcggaaattaggcagacattgctgattgctctctgacgacagcgcgttcgttatgcttcaccacacttctcgatggtttcgagtaccattcatctgtgagaaatctgatccctctctctctttacttgagatatttcagacttgttaattgcttgcagcgatataattaactagttgtttgttgacgttaacatctaaatttagcacctaaagcgaaaatagaaaaatatggttgaatttggaaatgacaatgtttccttccccaggctggtctgattgccaccgtagggctggtcaaactgacggtctgactccaactttaattttgtcgacttcaaaataagtatgacaaaagcagtcaaaattttcagctacacaattcagaacaagcaacggggacaaacgagtaggtggcacggtacagtatacctttggtctttggagttggctgtttcgccaagtgttttctcacatatttagatttcttttttatctctccttctccaactggcccattaatctattgaggttactctaggcaacccaactaacttcgccaggttttatgtaggcgacccatttatacgttaatgacaccagttgccagtatttgtattggcataaaatatagttatattggataagataacgggagaaactagtgcatgcattctgttaaaagtttagctgattaaattaaaaacagaacgaatccggttgaagctttccagatataccttgaaatcaaaattctggcaaataaaaatagaactggacacaaaaatcacaaaattacagtactaatacacaaaattaacataagttttacaactgtaaacatagtgtaaaggctaattttgggcaccaataatagagtagcattaggtctttggtgagtgaagtttctgaactggagcagagtaggcgagaggcagaataggactgagagctgaagcaaaatagagtagttttctgaagctgtagctttcattccaagtgaatgggtgatatatatatatatagacatatagtacatggtcaagtcgggttgctgaaccgacctctactgctgctgtattcagctaggggtaaaatccaaattgctctacctctaatagcagctgtgcagtgtgcacaggaaaagaaaatcaaactgagtgacagctaccaactagctaacataaccaaaagactaactagaacaagaattatactaacagtgagacccaattgcccatcaactgttttcaatagtttgtgaccaatgacagtacaaatctgctcaccagccaaaggctagaaaaaaattgtattcatggaaattgtgacaccataaatatagctatcccatcatttaaagagtttaataactaaataaaaggatcagaatggtttcttgctgggatctcccctttattaagagaaaacagagatgaacagacactataacgacaagtgaaatcaaactactacgggaccatggtaagaggtaacatatattccatgccatcctattttatttagccaggagagtaataacagaaatatattatcctttcaaaaaaaaaacagaaatatattagaagagagtaatgatagaggggcagcatcagatgattggcaagttctcctatttgcaacaatttaacttctcatgcagtgacgatgccatcaacaaatacttttggtttctcagtattatccttcaaatcacttactaggaacttggttattgcttctgccccatcgctaactttgagatgcacctcacggagattttcaaggatttcgatgccgaatagaccctcaaattcttgaaaccgcatttcaatgatttcgagtgctggcattgcactcttgtccggaaagctgagctttggcacgaaaggtgcaaagaagcgaagcagcttaagactcttgaattctttagctggaatgacgatttccccgtcagtggccaatttattgtcctcaaggatgccctttactgtgtcctgatcttgcttcgctgcactaagtgaaaaggcaaaggtgagggaaaacaatgaaggtaaattgcggaggatctccaaagtttcagtcgtaagaactgttatagatatggttaacttgttgagagtagtaatgctggtgatccactcaggtagccatttcaacttgccggacagctcaagggagactagatatcttggaggtgcagacatgttgtatagtgagttgataaatttagaattctcatcattgatggccagagtctgcaggccgcagctgccaaggtactcaatagaggagagtaattctttgaatgtatcattttcctcgcttattttgagcttgtatatggcaagcttccttagtcctgtcaactgatgaaggcttgcagctactgctgctgattcatcaacgatctcaatccctgacagtacacggagtgacttcattgtgcctttagctttttcttgggacaagaatcctttctctgcaggctcctttgttttaccttgaggtgacgggtttttcattgccttatttcttttttcttgaggcaacctcagccccttccgtgtatttttgttccccccaagtatgctactgatccgttttagctggcctacagacttaggcagctcctcgacatatgtctcccttatgtcaagagtttccaaatactcaagtttctcaatctttgagggaattttggcaatttctgtccgccggatgctcaaatacttgagtacaagcatttgacatatctccgtcacatgtctctctttcaaacccttccaaccctcaagatccagcacctgtattatcccatagttgaatgaatggaatggaacatggttcaggttcccaaacaccgtcagtgatcgcacttgagccaagttcaggccttttgtagaatttccatgcttggatccactgctttgcaacgatagtcgacggactttattgcttggcgcagtcatctgccagtgtccaccaaccacagtaataaaattctcttcgattgacttcgacatgatgtattcaagaaccatgtcatgaacttgaaaggcttttaccttcccattgctgccatgctccacagggcgtattaagttccttcttgcgagctgattaaagtatgcctctgcaacttcctcttcggttagcccttgcttctcagtagcaaaaccttcagcaatccatcgtcgggccaaccgcttcctactaattttccaaccctttggaaatatactcaagtacaataagcaggtcttgagatctgcaggcaaatcattgtaacaacaatccagtatcctcgtaaccccatccaggttaagagtagttactggatatggaaataatgattcgcaaagtttactccaatcggagttggctttgtttgggttgcaggctacaagaccagccatggtgacaatggccaaaggcaatcccccacatatctttgataacttcttgtctctatctgttcttttcattgggtcaggaatgcttgcattaaataaatctaggggcttgtcacctgtgagaaaatcaactttatgcaaaagatcctttccatgtccaggggaggatgtggcctcatcatttttatgtctaggggagcatgtggaaccaacagcatgaaatcttgtagtcactattattctgctgtctttatcattttcagaaggcagaaacggtatgatgatactgttccatgtcttggcagaccaaatatcatcaatcaagaggatatatctgtatagatgatgaaaagaaaacgagcacacatcagagaaaagaaaagtaccgttcaaaaactggtgtggtgttgtgtgtagaaggaaataaacatatggatttacaattaagttaattggcatatgagcaaaacaaatgtttacgaacagggtacctcttttcggccaggcgccgtttcagttcttcgcggagctgaagagagcccattgtttcctgctgcctgaccgatgtcttatcatcattccctccgagtagtgacagtggtagggctttcttcaacttgttcaacatccttttagtgcctgactcggcagtgttctcctctctacttgatgtgctactgctgccctggggttccctggtgttctcatctctactactactttctgtgctgccaccggcctcctcctgtttgctgacttgattcagaatactcctgaggacttcgtcttcatcatagttctgagacacagcgactgacgcctggcagtcaaatttaccactgacttttctgtacaatgccatggcaatggtggtcttccccacaccaccgaaaccgacaatggacagaacagctcgccccttatcaggttgaggttcggttagccacttctcaaggttttccatgacagtcttcatccccacaggctcctttatactgacgatctgaggttttgtgtcctgatactcagcaatgtcttgagccgcagcatgggctctgggtctgggactgttgctgctgtcacagtgttctgggttgttcactccatatctgttgcgccgatccgcgatctgttgcgcccgtaccttgagttcagcaattctcgaagcaatatcgcgacgaggccaccatgtcaagagttcatacatttttgtgagtatgaaggagcatttggcatcgctgattgaatcctgggggagccggtgcgcaaagtcatcgatgcagtcctcaacgtcataggcgacgtctcggatctgcttcatccagtccttcctccggttgtcatggttgtgaccctccgtcacaacgctaaggtcacggaggaaggcctgcatgctggcaagctcgtcattgatgtactggatgtcaccacggacgccgctgaccagagaatactcctgggcaagaaggttgcccagcttgcccaggagagatctcatggtggcttccgaagcacctaccgccaactccatcgtcgatcttgttttctgtataataattcactgcaactttcagctcttgcaagcactggagtggagagtgtgagtgacacacacacggtacgttgagatcaagcactgaaccccagctgagagtttccttggcctgcccagggaaaaggagaaaaatgaaaacgaaaaccaaaccatacagtgaatgaataatcattattaataatacttggaacgtaattttattttcaggagcgctttttgtccagtgctacctcatgtaaatatgttttttttcttctaattttataacttatagatgctctatcaatattcttctattacgcaatacctctttgatgcatgcatattcgtaagaaataataacttacagtacacaaactgaaatcgagtgtgaccaattcctgtgaacatgcaaataaattgtctaacctatgcaaatgtaccaagcagtaaaaagcgttactttccttccactgaaattttaccaactgcacccctcccaatcaaatgaacactacatccttgtttctctcccaacttttttcctcctccaaggttcaaagataatggtgcctataccttcattgcttgcagtaaggaaaagcccaggagtgaaaagattgttcaccttggcaaagcacggaagatcttggcagcagacacatcaactggtggctggctaacatggcaaggattcttcagaagctctaagagatctcaagacgaaagtaaaactggagggatggccgggcatgggcacggggcacccatggaacagaagccaacgggggaacaggcttgggcagccgccgtcgaaagggacagagaggagagcagcgcagcagctagctagaagttttgggcggaggcctcagcggcctacagtactgtagagtgcagacgcatggtcatggacttctccctgaaaaataaacagggggaaaaagaacggcccatggtttacggttcaggtgtccttataaaggggtctattttaaatgatctatttgaaataaatcttaaaaatatttttatgttaaaatagaacccttaactattaggaaaaagtccaaataaccccctaaactttggatggaagttcgtctagcactctaaactttaaaaccagatattcaaccaacctaaactttacaataccgtttatataaccccataagatgattttgcatagtgatttttatctaatttatatataagttggatgagtctgagctttggacatatatatatatattaaaattttaactgaaatatttctttttgcttcatattaactcttacttacaaacaattgtatcaagatgataatagtatgatatcactgtacaaaaataaattaataacttataactgatgatatgcaaatatattatattagttatttaaaattattcgtttaagcttctaaaatatgcaaagccatcatcaaactaccttaggagctaatatggatggtatggcaaagttcggaactcccgtttcgcaacttttgctccgcgagcacgtttcacgaactgctaaacgatacttttttttaaaaaaaaattctatagaatagttactgcagaaaatcatattaatctatttttaaagttttttagccaatacttaattaatcatatgttaatgagctacctcgctttctgtgcgaagtgaaaagctactttagaacatcttaatcctgtgcataatagcttctcatatacaccaaaagttatagaaatagcattgcatctatatataaagtctcatcttcttattagtatattttatttagctgctctaagttggtgcaggcgggcgctggtttggcactaagataaaaacaatcatcggatgctcacttaactcgcaatccaccctaccctagtgaccaccagtccacaagcagcacctatagctaactattagtgagagaccaccgacccaaaatcagtgcgaggcggtggcgagcggctcccatggccgtatacagcgtcgccacgggggccttggctcccgtcctatcgaagctctccgctttgctgggcgacgagcacttggatcttgcggagaggacccggagcgacgccatgttcatcaggtcccagctggaggccgtgcactctctcctcctcccgaggattagttggggaatgacgggggaggaagtcgatgctttgtgcaaggatgagttgatggcggaggtgcgtgagctgtcctacgacatggacgacgccatcgacgaattcttcttagaggagcccatggcgggcggcgacggtggccctttcgatgagctcaagacaagagttgaggatgtctccaagcggttctccgacagccggcggtggaggccaccggtggagcaacatcaaccatccctaaccgccgcaaccgtagactgtccacctcctcacgctcgcttcgtccacaacatgatggatgtgtcagagctcgtggagatggacaaacaacatgagaaagagctcatcaaattgctggaacaaggtgcggacacaagcatatatgcttcccggtggcgcatcgcaacaccatggcatgataaggaggtaaagacgacatccttttatttcttttttatctctacttctctatttatatattatattatattatattataaaaatttaaaatgttttcgctgtgtgtattttggtacgtcgtggctatcttcgtatcgtattcgatctcccgttcagtatattttgtgttgtacgtctctagcttccagatatatcatatatctttccattcccatgttattctttctttccaaattccaattattaattatacctcatttaatgagggacatttataccattttatttcagtagtaatttcatcctttcctagtgctagaagtgcacttgcatgaggatggaggcaaagctgaaatacccattcgttgtgatgaaattttaaaagcgaaccctaccgtaaactctaaattaagccccaaaaattataatgcaagtattcctgttttaatcaatatttggcatcatttttttacaatgtataattcagctacacaatttgctcatttttttttacaattgcttataattaagctacacaagctaccaattcagctacacaattggcacatactactatactagccaaatacccgttattttctacgtattaaaacaaattaatagtgagatttttggggcaattaatttggttttgtagaagttatatcatagagaaattattttataacggtaaagttggttgaaaatatgatggagaatgtggtaaataaaaaaaatactatagttggtggcagattcactgccaccgccattgccctcttttgaaaggaatatagaattttatcttgtagaagttatattgtacaagtgaaatatgatggaatcatatatgtagaataaaacattaaagtatgtgggggtatttggttgaaaatatgatggagtatgtggtaaatagaaaaaaaatactatacttgatgatggggcgatgatagattcactgccaccaccattgcatttttttaaaaggagtatataaacatatataggaacccacctactcattacttggtaagaggtcttacttggtaattgtgctggacggtagtatgccagtttaccattcatcatcattattggattccttttttttcttaaaaaaaggtataatatgatatgcaacttcttaattgctttatttcttttctagattaattttagataaaaattttattggatatggatcagctagcgtagtaaaaagtgaacgatacatgagaaaaaagattgatttgacaaaacaaaaacacaacccattaaattggagtgtcttattcccgtagactgcagtaacagaatggttcgatgatcaactaatgttttttgctgcagcaaagtactgtggtcaaggtgccggaaagagagtggggcttcccggacaatcggaacagtccatttatatgggcgagtgattcgtttgaacgattgcgttcgggaagtttgtgtggagatacgttgcggttggatggtgaaggcgcgaacatccgcaagctcttgtccaccctccggaataaggtgggccgcgcccagttggtgcaggtcgaggataagagaaaaagggtagaggaggcgacgaagccttgtgaatttcacgaggtcaaaacaatatgcatccttggattgcctggcgcaggcaaaacaactcttgcaaaactgttgtactcccatcactcaacgacagagcagcaattccaacaccgggctttcgtgtcactctctccgggtgccaatctcaccgacactcttactgatattttattgcaagtaggagcatataatgatgatgcaacaccatattgtgggaccggaacaccgcaccaacagtatctcattgacaatatatcagcttatctcattggc</dnaseqindica>|
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of Agriculture, Forestry, and Fisheries, Tsukuba, Ibaraki 305-0854, Japan, 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001075020.1 RefSeq:Os11g0689000]|
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*Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
−
}}
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*QTL Genomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
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[[Category:Genes]]
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==References==
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[[Category:Japonica mRNA]]
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<references>
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[[Category:Oryza Sativa Japonica Group]]
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* <ref name="ref1">
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[[Category:Japonica Genes]]
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Two Adjacent Nucleotide-Binding Site–Leucine-Rich Repeat Class Genes
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[[Category:Japonica Chromosome 11]]
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Are Required to Confer Pikm-Specific Rice Blast Resistance
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[[Category:Chromosome 11]]
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</ref>
 +
</references>
 +
 
 +
 
 +
==Structured Information==
 +
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]

Latest revision as of 01:18, 13 December 2016

The rice gene Os11g0689000 was reported as PIKM in 2008[1] by researchers from Japan.

Annotated Information

Gene Symbol

  • Os11g0689000 <=> PIK, PIKM

Function

Mutation

Expression


Evolution

You can also add sub-section(s) at will.

Labs working on this gene

  • NARO, National Institute of Crop Science, Tsukuba, Ibaraki 305-8518, Japan,
  • Plant Disease Resistance Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan, Institute of the Society for Techno-Innovation

of Agriculture, Forestry, and Fisheries, Tsukuba, Ibaraki 305-0854, Japan, 

  • Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan
  • QTL Genomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan

References

  1. ↑ 1.0 1.1 1.2 1.3 Two Adjacent Nucleotide-Binding Site–Leucine-Rich Repeat Class Genes Are Required to Confer Pikm-Specific Rice Blast Resistance


Structured Information