|
|
| (3 intermediate revisions by 3 users not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | The rice '''''Os11g0692300''''' was reported as '''''Xa26''''' in 2014 <ref name="ref1" /> by researchers from China. |
| − | GeneName = Os11g0692300|
| |
| − | Description = Similar to Bacterial blight resistance protein|
| |
| − | Version = NM_001075030.2 GI:297612424 GeneID:4351164|
| |
| − | Length = 3751 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os11g0692300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os11g0692300''''' '''<=>''' '''''OsXa26,Xa26''''' |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
| + | * '''''OsXa26''''' confers resistance against Xoo at both seedling and adult stages in rice. |
| − | AP = Chromosome 11:30088302..30092052|
| + | * '''''Xa26''''' belongs to a multigene family consisting of four members. It encodes a leucine-rich repeat (LRR) receptor kinase-like protein and is constitutively expressed. |
| − | CDS = 30088302..30088524,30088538..30090412,30090703..30090814,30090833..30091377,30091552..30091838<br>,30092017..30092052|
| + | * Significant difference in lesion length was observed among these lines after inoculation with a set of Xoo strains. |
| − | GCID = <gbrowseImage1>
| + | * The resistance conferred by Xa26 is in ̄uenced by the genetic background. |
| − | name=NC_008404:30088302..30092052
| + | |
| − | source=RiceChromosome11
| + | ===Phenotypic analysis=== |
| − | preset=GeneLocation
| + | * Transgenic plants carrying Xa26 showed enhanced resistance compared with the donor line of the gene in both seedling and adult stages. |
| − | </gbrowseImage1>|
| + | |
| − | GSID = <gbrowseImage2>
| + | You can also add sub-section(s) at will. |
| − | name=NC_008404:30088302..30092052
| + | |
| − | source=RiceChromosome11
| + | ==Labs working on this gene== |
| − | preset=GeneLocation
| + | * National Key Laboratory of Crop Genetic Improvement, National Center of Crop Molecular Breeding, Huazhong Agricultural University, Wuhan 430070, China |
| − | </gbrowseImage2>| | + | |
| − | CDNA = <cdnaseq>atggctcttgttcgattgccagtatggattttcgttgcggcgttgttaatcgcttcgtccagtactgtgccttgtgctccctctctaggtccgatcgccagcaagagtaacggcagcgacaccgacctcgctgcattgctggccttcaaagcccagctctccgatcctaacaacatccttgccggcaattggaccaccggaacgccgttctgccggcgggtggcagccaccgccgccggcggcagcgcgtcaccgctccaaggagaactcagctctcaccttggtaacatttcttttctcttcatcctcaacctcaccaacaccggcctcgctggctcggtgccgaacgaaataggaaggctgcatcgcctcgagctccttgatcttggccacaatgccatgtctggtggcatcccaatcgccatagggaacctcacgaggcttcagctacttaatctacagtttaaccagctatacggtccaatcccagcagagctgcaggggttgcacagtcttggcagcatgaatctccgtcacaattacctcactggatcgattccggacgatctgttcaacaacacgcctttgctaacttatctcaacgttggtaacaatagcctgtcaggactgataccgggttgcatcggttccttgccaatcctccaacaccttaactttcaggccaataacttaactggggcggtgccaccagccatcttcaacatgtctaaattaagtaccatttctcttatatcgaatggtttaactggccctatccctggtaatacaagtttcagcctcccagttctacgatggttcgccatcagtaaaaacaatttctttggtcagattccactggggctcgcagcgtgtccatacctccaagttattgccatgccttataatttattcgagggtgttttgccaccatggctgggcaggttgaccaatcttgatgccatctccttgggtgggaataactttgatgctggccccatccctactgaacttagcaacctcaccatgctgacagtcttagatttgacgacgtgcaacctaacaggaaacatccctgcagatattgggcacctaggccaactttcatggttgcatcttgcgatgaatcaactaacaggacctattcctgcttctcttggcaacctttcatcgttggcaatcctgctactgaaaggaaacttgctggatggatcattaccatcgacagttgatagcatgaactcactaacggcagttgatgttactgaaaacaatctacacggggatctcaacttcctttctactgtttccaattgtaggaagctttctaccctccaaatggacctgaattatatcaccggaatcctcccagactatgttgggaacctgtcgtcacagctgaaatggttcacgttatctaacaacaagttaactggcacgcttccagctaccatttcaaatttaactgctcttgaggtgatagatctttcacataaccaactgcgcaatgcaattccagaatcaatcatgacgattgagaatctccaatggcttgacctaagtggaaatagcttgtctggcttcatcccatcgaatactgcacttctaaggaacattgtaaaactgttccttgaaagcaacgaaatttctggctccataccaaaggacatgaggaacctcactaatctagagcaccttctattgtctgataacaaattaacgtcaactataccaccaagcttatttcatcttgataaaatcgtcaggctagatctttctcgaaacttcttgagtggtgcactgccggttgatgtagggtatttgaagcaaattaccatcatggatctctctgacaaccacttttctggtagaatcccatattcgataggacaacttcagatgttaacacacctgaatctatcagctaacggattctatgattctgttccagactcttttggtaatttaactggcttgcaaactttggacatatcccataacagtatttctggtaccatcccaaactacttggctaattttacgacccttgttagcttgaacctatctttcaacaaactacatggtcaaataccggaaggagccgaaaggttcggtcgaccaatttcattaagaaatgaagggtacaatacaattaaagagcttacaacgacagtatgctgtcgaaaacagattggggcaaaagccctgacccgattgcaagagcttcttcgtgcaaccgatgatttcagcgatgatagcatgttgggcttcggaagctttggaaaagtttttaggggacgattgagcaacggtatggtggttgccataaaagttatacaccagcatctggaacatgccatgagaagctttgacaccgagtgtcgtgtgctccgaatggctcgacatcgcaacctgataaagattctgaacacttgttccaacctggactttaaagcactggtacttcagtacatgcccaagggtagcttagaagcactcctgcactcagaacaagggaagcaattaggctttctcgagaggttggatattatgctagatgtgtcaatggcaatggaatacctgcatcatgagcactatgaggtggtcttacactgcgatttgaagcctagcaacgtactatttgacgatgatatgacggcacatgtggcagactttggtattgcaaggttgttgttaggtgatgacaactccatgatctcagctagcatgccaggaacagttgggtacatggcaccagtgttcactgcgaagagacccacagatgctatgtttgtgggagaactgaacatcaggcagtgggttcaacaggcgtttcctgcagagcttgtccatgtggtggactgcaaacttctacaggatggctcttcttcttcttcaagtaacatgcatgacttccttgtgccagtgttcgagctgggcttgctctgttcggctgactcccccgagcaaaggatggcgatgagcgatgtggtcgtgacactgaacaagattagaaaggactatgtcaaattgatggcaaccacagttctgcaacaatttatagttggtgtaaaaatgtga</cdnaseq>|
| + | ==References== |
| − | AA = <aaseq>MALVRLPVWIFVAALLIASSSTVPCAPSLGPIASKSNGSDTDLA ALLAFKAQLSDPNNILAGNWTTGTPFCRRVAATAAGGSASPLQGELSSHLGNISFLFI LNLTNTGLAGSVPNEIGRLHRLELLDLGHNAMSGGIPIAIGNLTRLQLLNLQFNQLYG PIPAELQGLHSLGSMNLRHNYLTGSIPDDLFNNTPLLTYLNVGNNSLSGLIPGCIGSL PILQHLNFQANNLTGAVPPAIFNMSKLSTISLISNGLTGPIPGNTSFSLPVLRWFAIS KNNFFGQIPLGLAACPYLQVIAMPYNLFEGVLPPWLGRLTNLDAISLGGNNFDAGPIP TELSNLTMLTVLDLTTCNLTGNIPADIGHLGQLSWLHLAMNQLTGPIPASLGNLSSLA ILLLKGNLLDGSLPSTVDSMNSLTAVDVTENNLHGDLNFLSTVSNCRKLSTLQMDLNY ITGILPDYVGNLSSQLKWFTLSNNKLTGTLPATISNLTALEVIDLSHNQLRNAIPESI MTIENLQWLDLSGNSLSGFIPSNTALLRNIVKLFLESNEISGSIPKDMRNLTNLEHLL LSDNKLTSTIPPSLFHLDKIVRLDLSRNFLSGALPVDVGYLKQITIMDLSDNHFSGRI PYSIGQLQMLTHLNLSANGFYDSVPDSFGNLTGLQTLDISHNSISGTIPNYLANFTTL VSLNLSFNKLHGQIPEGAERFGRPISLRNEGYNTIKELTTTVCCRKQIGAKALTRLQE LLRATDDFSDDSMLGFGSFGKVFRGRLSNGMVVAIKVIHQHLEHAMRSFDTECRVLRM ARHRNLIKILNTCSNLDFKALVLQYMPKGSLEALLHSEQGKQLGFLERLDIMLDVSMA MEYLHHEHYEVVLHCDLKPSNVLFDDDMTAHVADFGIARLLLGDDNSMISASMPGTVG YMAPVFTAKRPTDAMFVGELNIRQWVQQAFPAELVHVVDCKLLQDGSSSSSSNMHDFL VPVFELGLLCSADSPEQRMAMSDVVVTLNKIRKDYVKLMATTVLQQFIVGVKM</aaseq>|
| + | <references> |
| − | DNA = <dnaseqindica>1..223#237..2111#2402..2513#2532..3076#3251..3537#3716..3751#atggctcttgttcgattgccagtatggattttcgttgcggcgttgttaatcgcttcgtccagtactgtgccttgtgctccctctctaggtccgatcgccagcaagagtaacggcagcgacaccgacctcgctgcattgctggccttcaaagcccagctctccgatcctaacaacatccttgccggcaattggaccaccggaacgccgttctgccggcgggtgggtgtctcgtgcagcagccaccgccgccggcggcagcgcgtcaccgctccaaggagaactcagctctcaccttggtaacatttcttttctcttcatcctcaacctcaccaacaccggcctcgctggctcggtgccgaacgaaataggaaggctgcatcgcctcgagctccttgatcttggccacaatgccatgtctggtggcatcccaatcgccatagggaacctcacgaggcttcagctacttaatctacagtttaaccagctatacggtccaatcccagcagagctgcaggggttgcacagtcttggcagcatgaatctccgtcacaattacctcactggatcgattccggacgatctgttcaacaacacgcctttgctaacttatctcaacgttggtaacaatagcctgtcaggactgataccgggttgcatcggttccttgccaatcctccaacaccttaactttcaggccaataacttaactggggcggtgccaccagccatcttcaacatgtctaaattaagtaccatttctcttatatcgaatggtttaactggccctatccctggtaatacaagtttcagcctcccagttctacgatggttcgccatcagtaaaaacaatttctttggtcagattccactggggctcgcagcgtgtccatacctccaagttattgccatgccttataatttattcgagggtgttttgccaccatggctgggcaggttgaccaatcttgatgccatctccttgggtgggaataactttgatgctggccccatccctactgaacttagcaacctcaccatgctgacagtcttagatttgacgacgtgcaacctaacaggaaacatccctgcagatattgggcacctaggccaactttcatggttgcatcttgcgatgaatcaactaacaggacctattcctgcttctcttggcaacctttcatcgttggcaatcctgctactgaaaggaaacttgctggatggatcattaccatcgacagttgatagcatgaactcactaacggcagttgatgttactgaaaacaatctacacggggatctcaacttcctttctactgtttccaattgtaggaagctttctaccctccaaatggacctgaattatatcaccggaatcctcccagactatgttgggaacctgtcgtcacagctgaaatggttcacgttatctaacaacaagttaactggcacgcttccagctaccatttcaaatttaactgctcttgaggtgatagatctttcacataaccaactgcgcaatgcaattccagaatcaatcatgacgattgagaatctccaatggcttgacctaagtggaaatagcttgtctggcttcatcccatcgaatactgcacttctaaggaacattgtaaaactgttccttgaaagcaacgaaatttctggctccataccaaaggacatgaggaacctcactaatctagagcaccttctattgtctgataacaaattaacgtcaactataccaccaagcttatttcatcttgataaaatcgtcaggctagatctttctcgaaacttcttgagtggtgcactgccggttgatgtagggtatttgaagcaaattaccatcatggatctctctgacaaccacttttctggtagaatcccatattcgataggacaacttcagatgttaacacacctgaatctatcagctaacggattctatgattctgttccagactcttttggtaatttaactggcttgcaaactttggacatatcccataacagtatttctggtaccatcccaaactacttggctaattttacgacccttgttagcttgaacctatctttcaacaaactacatggtcaaataccggaaggaggtgtctttgcaaacatcactttacaatacttggaaggaaactcagggctatgtggtgctgcccgtttaggattcccaccatgccaaaccacctcccccaacagaaataatggtcacatgctaaaatatttgctacctactataatcatagtagttggaattgtagcttgttgcctgtatgtagtgattagaaagaaagctaaccatcaaaatacttctgctggtaaggctgaccttatcagccatcaattgctctcctagcatgagctttttttttttttgccgggtcagccgaaaggttcggtcgaccaatttcattaagaaatgaagggtacaatacaattaaagagcttacaacgacagtatgctgtcgaaaacagattggggcaaaagccctgacccggtaagctataatcaacagattgcaagagcttcttcgtgcaaccgatgatttcagcgatgatagcatgttgggcttcggaagctttggaaaagtttttaggggacgattgagcaacggtatggtggttgccataaaagttatacaccagcatctggaacatgccatgagaagctttgacaccgagtgtcgtgtgctccgaatggctcgacatcgcaacctgataaagattctgaacacttgttccaacctggactttaaagcactggtacttcagtacatgcccaagggtagcttagaagcactcctgcactcagaacaagggaagcaattaggctttctcgagaggttggatattatgctagatgtgtcaatggcaatggaatacctgcatcatgagcactatgaggtggtcttacactgcgatttgaagcctagcaacgtactatttgacgatgatatgacggcacatgtggcagactttggtattgcaaggttgttgttaggtgatgacaactccatgatctcagctagcatgccaggaacagttgggtacatggcaccaggtacttaatagtttttcttgtctttctcaaactttgcccgatcttttattattattgagtagatagggtgcaactaatttttggtgtctaatttttcttgagcagagtaagggactctaggaaaagcatcacggaagagtgatgtgttcagttacggcatcatgctgcttgaagtgttcactgcgaagagacccacagatgctatgtttgtgggagaactgaacatcaggcagtgggttcaacaggcgtttcctgcagagcttgtccatgtggtggactgcaaacttctacaggatggctcttcttcttcttcaagtaacatgcatgacttccttgtgccagtgttcgagctgggcttgctctgttcggctgactcccccgagcaaaggatggcgatgagcgatgtggtcgtgacactgaacaagattagaaaggactatgtcaaattgatggcaaccacagtgagcgttgtgcagcagtgattcatcgctctctcgtggtatatgagcgaatgaaatatatatatcctttgcatccatttcttctgtattaggaatagcatcagtgtatacccagtgatcaattaccctttgcttctatgtgtttacggttgaattgaatatatctatggtgcttcaggttctgcaacaatttatagttggtgtaaaaatgtga</dnaseqindica>|
| + | * <ref name="ref1"> |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001075030.2 RefSeq:Os11g0692300]|
| + | Sun X, Cao Y, Yang Z, Xu C, Li X, Wang S, Zhang Q. Xa26, a gene conferring |
| − | }}
| + | resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor |
| − | [[Category:Genes]] | + | kinase-like protein. Plant J. 2004 Feb;37(4):517-27. PubMed PMID: 14756760. |
| − | [[Category:Japonica mRNA]]
| + | </ref> |
| − | [[Category:Oryza Sativa Japonica Group]] | + | </references> |
| − | [[Category:Japonica Genes]]
| + | |
| − | [[Category:Japonica Chromosome 11]] | + | ==Structured Information== |
| − | [[Category:Chromosome 11]]
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |
