Difference between revisions of "Os12g0143900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os12g0143900| Description = Similar to Long chain acyl-CoA synthetase 6 (EC 6.2.1.3)| Version = NM_001072671.1 GI:115487303 GeneID:4351483| Leng...")
 
 
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os12g0143900|
 
−
Description = Similar to Long chain acyl-CoA synthetase 6 (EC 6.2.1.3)|
 
−
Version = NM_001072671.1 GI:115487303 GeneID:4351483|
 
−
Length = 8400 bp|
 
−
Definition = Oryza sativa Japonica Group Os12g0143900, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
+
Please input expression information here.
−
AP = Chromosome 12:2160710..2169109|
+
 
−
CDS = 2160981..2161076,2161150..2161236,2161333..2161419,2161641..2161726,2161805..2161908<br>,2162618..2162704,2162790..2162913,2163058..2163176,2163268..2163397<br>,2163583..2163671,2163804..2163892,2164579..2164672,2164778..2164857<br>,2164952..2165041,2166307..2166393,2166495..2166539,2166966..2167042<br>,2167120..2167225,2167383..2167464,2167553..2167624,2168106..2168183<br>,2168259..2168319,2168826..2168979|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008405:2160710..2169109
+
 
−
source=RiceChromosome12
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008405:2160710..2169109
+
 
−
source=RiceChromosome12
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggcgcggcagcagcagcagcgggaggaggagagggccccaatgggcgcggcccagcggcggctgcgcgccgtctccggccacctccagccgccgacggagtccggcggcgttgacctcgccgccaaccccaccgccggcgagtacgcgcacgtgcagggctacagtgctgtactccctgagaagttgcaaactggaaagtggaatgtgtacagatccgcaaagtcacctcttaagttaataaatagattccctgataacccagacattggaacgcttcatgataactttgtgtatgcagttgaaacctttagggactgtagatacctgggcacaagagtctgtgttgatggaacagttggggactacaaatggatgacatatggagaagctagtacaagccggactgcgataggttctggtcttatttaccatggaatacctgaaggtgcgcgcattggtttgtattttataaacagacctgagtggaccatagttgatcatgcctgtgcggcatattcatatgtatccgtgccactttatgatactctaggtccagatgcagttcagttcattgttaaccatgcgacagtacaagctattttctgtgtgcctcaaacactaagcactctactaagctttataactcaaatgccgtgtgttcgccttatagtggtaattggtggagacaatgcaaatatgccatctaccccaacagctactggagtggaaattataacttactccagactacttagccagggaaagatgagttctcaatcttttcgccctccaaaacctgaagatattgccactatttgttacactagtggcactactggcacaccgaagggagttgttctttctcatgggaatttaattgcaaatgtagcaggatcaagcctagtcattaagttttacccatctgatgtgtatatctcatatctacctttagctcacatctatgagagagttaaccaggtctcagtggttcactatggtgttgccattggtttctaccaaggggataatttgaagctgatggatgatctggctgcattgagaccaacagtatttcctagtgtgcctcggctatataatagaatttatgctgcaattacaaatgctgtcaaggagtctggagggttgaaagaaagattgtttcatgctgcatacaatgctaagaggcaagcgattattaatgggagaaatccgtccccaatgtgggacaggttggtatttaacaaaataaaagctaggcttggtggacgtgtgaggcttatgacttcaggcgcttctccattgtcagctgatgtaatggaattcctaagaatatgttttggtggtgaagtactcgaaggatatggaatgacagagacatcatgtatcatctctgcaatgaatattggtgataggttaattggtcatgtcggatctccaaatccatcttgtgagattaaactagtggatgtcccagaaatgaattacacctctgaggatgaaccatatcctcgtggagaaatctgtgttaggggacctacgatattctgtggttactataaagacgaaatccaaactagagaggctgttgacgaggatggttggttacacactggagacataggtttgtggatgcctggagggcgtctaaaaattatagataggaaaaagaacattttcaagttagctcaaggagaatacatagctcccgagaagattgagaatgtctatgctaagtgcaagtttattgcgcagtcctttatatatggtgatagtttaaactcttctttggttgccgtagtagcagttgaaccagatgtgttgaaggcttgggctgcatctgagggaatccagcacgaggatttaagacagctttgtgctgatccgaaagcaagatctgctgtcctggctgagatggactctattggaaaggaagcacagctaagaggttttgaatttgccaaagctgttacccttgttgctgaacctttcacattagaaaatggtctcctcaccccaactttcaaggtcaaaagaccgcaagctaaggcatactttgcaaaagaaatcgcagatatgtatgcacaactgcgccaagcagaacagataaaacctaagctgtaa</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MARQQQQREEERAPMGAAQRRLRAVSGHLQPPTESGGVDLAANP                    TAGEYAHVQGYSAVLPEKLQTGKWNVYRSAKSPLKLINRFPDNPDIGTLHDNFVYAVE                    TFRDCRYLGTRVCVDGTVGDYKWMTYGEASTSRTAIGSGLIYHGIPEGARIGLYFINR                    PEWTIVDHACAAYSYVSVPLYDTLGPDAVQFIVNHATVQAIFCVPQTLSTLLSFITQM                    PCVRLIVVIGGDNANMPSTPTATGVEIITYSRLLSQGKMSSQSFRPPKPEDIATICYT                    SGTTGTPKGVVLSHGNLIANVAGSSLVIKFYPSDVYISYLPLAHIYERVNQVSVVHYG                    VAIGFYQGDNLKLMDDLAALRPTVFPSVPRLYNRIYAAITNAVKESGGLKERLFHAAY                    NAKRQAIINGRNPSPMWDRLVFNKIKARLGGRVRLMTSGASPLSADVMEFLRICFGGE                    VLEGYGMTETSCIISAMNIGDRLIGHVGSPNPSCEIKLVDVPEMNYTSEDEPYPRGEI                    CVRGPTIFCGYYKDEIQTREAVDEDGWLHTGDIGLWMPGGRLKIIDRKKNIFKLAQGE                    YIAPEKIENVYAKCKFIAQSFIYGDSLNSSLVAVVAVEPDVLKAWAASEGIQHEDLRQ                    LCADPKARSAVLAEMDSIGKEAQLRGFEFAKAVTLVAEPFTLENGLLTPTFKVKRPQA                    KAYFAKEIADMYAQLRQAEQIKPKL</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]
−
DNA = <dnaseqindica>8034..8129#7874..7960#7691..7777#7384..7469#7202..7305#6406..6492#6197..6320#5934..6052#5713..5842#5439..5527#5218..5306#4438..4531#4253..4332#4069..4158#2717..2803#2571..2615#2068..2144#1885..1990#1646..1727#1486..1557#927..1004#791..851#131..284#gaggagtcggagtcccccacgcttcgtcctctgcttcccacgcgccacaaatttcttcgccttcttcccacgcaacgcctcgccggagaaacaggagacgagtagtagacgactagtgcgagccaagggcatggcgcggcagcagcagcagcgggaggaggagagggccccaatgggcgcggcccagcggcggctgcgcgccgtctccggccacctccagccgccgacggagtccggcggcgttgacctcgccgccaaccccaccgccggcgagtacgcgcacggtacgtacgatcgatcgatcgatcgtctattcgtctgcactactacttgctacttactagtgatgtggtatgcatttgtgattttatccatcccgtgcatgattgatgccgcgatttggatcttggggttggattgcgtggggcctactgggcgcgcgcaccgctcgagcgtaaagtggataaagtggagaataacaagtgcaaccactcccaaattcccaattcttaagctgtagagatagcttcctctttctgaatttgtgcttagactgggcatctatgccataattccattgctgagctcggtaaccgtctaaaataattgcttagctccgagctcgttagcttttaactgactgggatgcttcttttcctattttttagtacgccgacgcatgctagttgcggtttctcaactgcactctgcatgttttaagttatctttcttgacatagcaatgctttttttttttaaagtttacaactcaatgtgcatagcttctccagtgcagggctacagtgctgtactccctgagaagttgcaaactggaaagtggaatgtgtacaggtaggttatttagtagtatatgttatactgcatttgcttatgtcatggctcaaaatttctgtttccatcttgcagatccgcaaagtcacctcttaagttaataaatagattccctgataacccagacattggaacgcttcatgataactttgtgtaagaatcctcatagtctgacttgagcatcaaacttctatttctgaatgttaatctcaacttcgacaaatctcagttatttaccaatgttatgctacgatttatcaaattcttgtcttgaattgtcagcaaacctttgagtgtaattacataccatcaagcaaaataaatgctagttatgttttccttaggaatctcccatattttttgtttctgaattgtatcaggaagatttttaggaaaatctaatctaattaggaaaaagaattattcgcaagtgagtctgttattttattgaaaccttggagttggaaaatgtttgtatgcaacgacttgaatgcaaaggtttttatctgatgtttttatgaaaactggtaaacttaaatgcctgttgcaggctacatgttttacaagagaactattagtgttcaaatttaagttctgtgataagttctcaggcaatatacccaaaattgtgcaggtatgcagttgaaacctttagggactgtagatacctgggcacaagagtctgtgttgatggaacagttggggagtaagaattggttcctggatatatatgtcattattgccttttgtagctttgttaaaatcttttaaatgatatatatgaattgttgcagctacaaatggatgacatatggagaagctagtacaagccggactgcgataggttctggtcttatttaccatggaatacctgaagtgagtcattatgatctcaacaagcaccgtccttctgattttaactactaacaggcagatcttgtcacacattgccataatgatatagcatttgtggttacacttacagattcctttttttaaacttgcattaaataattttctaaaactgaaccagggtgcgcgcattggtttgtattttataaacagacctgagtggaccatagttgatcatgcctgtgcggcatattcatatgtatccgtgccactttatgatactctaggtatgcactcatcacataatgatcatctatctccttttcatttatctagcaacaagttttatgtattgtttatacaggtccagatgcagttcagttcattgttaaccatgcgacagtacaagctattttctgtgtgcctcaaacactaagcactgtgagctttaacccttatctcaaccttgtatagttactagtctatacaatcattaaaagtcgcagttttcatgtcactgctcatactggtccttaacttagtgatgctgggaactagctagttatttccaggaaacagatctgtgctttcaggtgctgatctcatcctgcagaaactgcatgcacatcaaatactgtttttttgggaccatatccacatgcacacaaccaatgggctgagtgctgggctggggcctgatcatgaaatacattctatgtggattctgatcctatttccattttcttatttcaaacactacatcaattttggtaacactgcctagcatttaatcttgaattttatcatggtatattctatggaacgaagtgtacttatgttctgcttatgtgtaactatttattgcagctactaagctttataactcaaatgccgtgtgttcgccttatagtggtaagttcaaaccatttatagttagtatattcaatgaacggccatgattgtttaagattctctctttttctttttttttaaaaaaaacttgtttaatataggtaattggtggagacaatgcaaatatgccatctaccccaacagctactggagtggaaattataacttactccagactacttagccaggtgagtttgctaaatggcccttaagtttactaacactacttcttgcttatggtatttgttctctttttcataaaaaaaaagtatctgttatctaatgtcagtcaaccaactggcatttaaacttgttaaaaaaacactttacatgcatacctgtagtccttgagaaccacatatctagttccaaagttgtatgggcatatggttcaatatttatatgaaatctcttgggatacgaattacttggctgcactcttgcactgattaatttagtactgtttccaaaagatttatccatggcaaacaaagttgatgtgacatcttgtttccacttccattagaaaacacgtttgttatgcaattatatttatgtatgtatgagacacgttgatattttggggtgaaaactgggaacatgaatattggatatccagttgacagctgtaatgcacgtatgcatacgttagctctctaattccatttcatattttcatgtatagtaaacttgaaagctaaatgacaatcttacataataacaaattgtagggctaccacatggagtaaacattacataataacaaattgtagggctaccacatggagtaaacatctttttttcctttcaaattgttataaaaccggccccgaaatcacatcggaaaccaatccgcggaagaaaacgccataggagatccaaacacgatgatgacaccgaggcatgatatttgataacggagttcagccgaggcctacatctccggggcactgattacgggtgctcctccccgatctagcatatacagcgtatcagagttacaacgactcacggccggtagccgccggcagccgctccctctcgctatgctaagtcgccatgcggttacaacaggcacgccctctatttatgagagatcctaggatagagtccgactcatactctagtcctaatacctattacaactccaagtcctaaactgtaaccgactacgtatacatattcgacacaaactctaacacaaatcatagttttgtctatgtgctatagcagtgtgcggtgtgcacacttgctcaattcttttcttatggacacacatagtatgtgcatggtggatatatattgccttagttttagttttgcatcaacggcctgcgaaataaaaagtatgtgtgtatctatttccagccatatacattatctttgctgttagattaaaggatgctagcacattttgctcactgttcttctgatctttcaatcttcaactcagggaaagatgagttctcaatcttttcgccctccaaaacctgaagatattgccactatttgttacactagtggcactactggcacaccgaaggtaaataactcatctttctgattatttttagtttcattcaaagagctcttctaattcaaccttccaatctgtgacgatgtcatatttatttcagggagttgttctttctcatgggaatttaattgcaaatgtagcaggatcaagcctagtcattaagttttacccatctgatgtgtgagtttacattaaatctagatttgtttctttctgccatagcttaataaatttatcccatctggtaatgttttgaattataatcatgttggtatgtctttgcaggtatatctcatatctacctttagctcacatctatgagagagttaaccaggtctcagtggttcactatggtgttgccattggtttctaccaaggggtatgcagatccaaaaccatttaggttgttaattttgtagttatttgcatttgctgtttgtgtaaataataaaaccagtagaataatggggtttctgagttctgacctagcaaaggtaaatatgaataaccggggacaaatgaattaaaccactcggaaaagtaatttctaatgttagttctgccacaagttacccctagatataggagcagaattgaatcacctagtgcaatatttcaaactgttatatgacaatcattcagaggttaattgaacacaacagatgcattttatgctggacctttcacctacaaggctacaagataatattctgataatcccattgtactatttgttatggcctcatcatcttaatggatgcattatgttggctcatgctagttcacttcagctctatgttgctcatcatcatcctttcctcaccatcgtaccatcatattgtaaacctattgctggatttccttgcacacagcaagcaattagatccatatagggttatatcttatgtgtttgccagtagcaataactttgttcaacacttgacaaatatgcatttagatcaaatatccatcttacttactacatggattctttgccataataatcgtttacattcaatggattctttgccatatatctgatgtgtatattgttgttgtttctaggataatttgaagctgatggatgatctggctgcattgagaccaacagtatttcctagtgtgcctcggctatataatagaatttatgctgcgtaatccaactacacccgtaacttagatactttcatgttgggaaaaactatttctagtcatatcctttttgaggttagcattttttccccttttcagtacagctaagtggttagttgtttatcattttgtagaattacaaatgctgtcaaggagtctggagggttgaaagaaagattgtttcatgctgcatacaatgctaagaggcaagcgattattaatggtaagaacagctcattgatattaagtgtcttagttttgcaatgacttctcatttaaaaacagttcctacatgctttctgtgacttatgtcatatcccatttttttgggaaaattggaaccatgccacttttttatccactacatctacatgtatgaaatgttaattctacattttgggttattagggagaaatccgtccccaatgtgggacaggttggtatttaacaaaataaaagctaggcttggtggacgtgtgaggcttatgacttcaggcgcttctccattgtcagctgatgtaatggaattcctaagaatgtaagctgtcttcatatatgcccttggggtagcacgattattatttagaacttggattaactaatatactactgttttaattttttaacagatgttttggtggtgaagtactcgaaggatatggaatgacagagacatcatgtatcatctctgcaatgaatattggtgataggttaattggtcatgtcggatctccaaatccatcttgtggtaagatctgtgtttgggtttaactagacttggttggataaataacttgtccttttgttcacagtaattcctcactgttattgtttttgtacattatcacttctcacactcttccataacgcaaattctgtttctatttttcagagattaaactagtggatgtcccagaaatgaattacacctctgaggatgaaccatatcctcgtggagaaatctgtgttaggggacctacgatattctgtggttactataaagacgaaatccaaacgtaatttgctatatatttctatcttctactatttaaattcataaatatttgatgagtttcagcaattaaatttgaaaacctgcagtagagaggctgttgacgaggatggttggttacacactggagacataggtttgtggatgcctggagggcgtctaaaaattatagataggtaaaactgaatgatctagtgtttcatgtttaagaatttccttttgaattgagatggccttgtgcctttgtttcattatatagagaaaaaatgtatatctgatcaatctacacttttaccttcgctgcagtttcgtaatgatacctaaattagtcagttgctaaattaaattgttaagatgcatacttgaaatcttaagttagcttgtactattttcttctcagtgtattgtttgttagctgagatttgcatggttggtgataaaactctaatatgtgaaagttcaatgctatttggtctaacttgtagaatttgctgtcatttgtaattttgaatacataccatattactaagatggtagggatatctaataacaacttggtaagttcaaaactactgtgctaaaagactaaagtgaaagcaagatgttaaaccttcttagctattgatcaaagagcaaaccaaaactatcttacccactgttattgtagcagacagcacatggtagccttcaactaggaaggttgtaacacatggatgtttttgagaaatgaccacaaccctattgtgaaatacttttgtctctaattacttattatcctctttccacacattttcttaggtaatttaagcccctggaactgtatttgatctgattagttttcttattaaataaattattaattgattgtgttttaatggtctcaaggaaaaagaacattttcaagttagctcaaggagaatacatagctcccgagaagattgagaatgtctatgctaagtgcaagtttattgcgcagtcctttatatatggtaatattcatgtccttatactggttataactaccaataatttgccatatatgttctaagctgttgattcggatgcaggtgatagtttaaactcttctttggttgccgtagtagcagttgaaccagatgtgttgaaggcttgggctgcatctgagggaatccaggtaaatatgctgaccttagagagtagatattctgcaactgcacaactggtttctccaaactagcggaacattatattcttcttgcacctctttgccagttcactacacaaattatgtctctctttgtcaaaaaaaaataaataaataaaaacagaacacccacaaataaaactccttacatcttcgttggctacttatgttatgtcctttctaacctgtagcacgaggatttaagacagctttgtgctgatccgaaagcaagatctgctgtcctggctgagatggactctattggaaaggaagcacaggtttacttctcacttctcataaccttgcatgctcttaataagttatgaatcatgtgtatgattcccttattaatctctctttccttgctgcaccagctaagaggttttgaatttgccaaagctgttacccttgttgctgaacctttcacattagaaaatggtctcctcaccccaactttcaaggtaggcccgttaatacaagttggaggagatttctacaccaggtactaattctctatctcaatgacttttgcaggtcaaaagaccgcaagctaaggcatactttgcaaaagaaatcgcagatatgtatgcacaactgcgccaagcagaacagataaaacctaagctgtaactacccgagtgacaatcggagtaaaagttctagcaacaaactacaaatgactggcttggtatagtgaaggcaactgtgaatgaactctgttggatatgtccacgaatgcttgataatcatctaataggatgatcaggtaaaagaatagcctgttttatgtacatctgtaagatgaaatgaaaaaagatgtagacatgttaaatgtcatatatatgaatccattgaatttcacctgactatcataggaatataaggtaaaactttccctctt</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072671.1 RefSeq:Os12g0143900]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 12]]
 
−
[[Category:Chromosome 12]]
 

Latest revision as of 03:36, 15 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information