Difference between revisions of "Os12g0162500"
(Created page with "{{JaponicaGene|
GeneName = Os12g0162500|
Description = Similar to BZIP-like protein|
Version = NM_001072756.1 GI:115487473 GeneID:4351576|
Length = 3683 bp|
Definition = ...") |
|||
| (One intermediate revision by one other user not shown) | |||
| Line 1: | Line 1: | ||
| − | + | The rice '''''Os12g0162500''''' was reported as '''''OsbZIP84''''' in 2008 <ref name="ref1" /> by researchers from India. | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | + | ==Annotated Information== | |
| − | + | ===Gene Symbol=== | |
| − | + | *'''''Os12g0162500''''' '''<=>''' '''''OsbZIP84,OsbZIP, bZIP84''''' | |
| − | + | ===Function=== | |
| − | + | * The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes. | |
| − | + | * The '''''OsbZIP''''' proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region. | |
| − | + | * bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling. | |
| − | + | ||
| − | + | ===Expression=== | |
| − | + | * The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development. | |
| − | + | * bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation. | |
| − | + | ||
| − | + | ===Evolution=== | |
| − | + | * The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants. | |
| − | + | * Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains. | |
| − | + | * Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively. | |
| − | + | <br> | |
| − | < | + | '''''You can also add sub-section(s) at will.''''' |
| − | + | ||
| − | + | ==Labs working on this gene== | |
| − | + | * Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India | |
| − | + | ||
| − | + | ==References== | |
| − | [[Category:Genes]] | + | <references> |
| − | + | * <ref name="ref1"> | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression |
| − | [[Category:Japonica | + | analysis of the basic leucine zipper transcription factor family in rice. Plant |
| − | + | Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID: | |
| − | + | PMC2245831. | |
| + | </ref> | ||
| + | </references> | ||
| + | |||
| + | |||
| + | ==Structured Information== | ||
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]] | ||
Latest revision as of 05:33, 25 February 2017
The rice Os12g0162500 was reported as OsbZIP84 in 2008 [1] by researchers from India.
Contents
Annotated Information
Gene Symbol
- Os12g0162500 <=> OsbZIP84,OsbZIP, bZIP84
Function
- The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes.
- The OsbZIP proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region.
- bZIP proteins have been shown to regulate diverse plant-specific phenomena, including seed maturation and germination, floral induction and development, and photomorphogenesis, and are also involved in stress and hormone signaling.
Expression
- The researchers from India find specific or coexpression patterns of rice bZIP transcription factors starting from floral transition to various stages of panicle and seed development.
- bZIP transcription factor-encoding genes in rice also displayed differential expression patterns in rice seedlings in response to abiotic stress and light irradiation.
Evolution
- The phylogenetic relationship among rice bZIP domains as well as with bZIP domains from other plant bZIP factors suggests that homologous bZIP domains exist in plants.
- Similar intron/exon structural patterns were observed in the basic and hinge regions of their bZIP domains.
- Detailed sequence analysis has been done to identify additional conserved motifs outside the bZIP domain and to predict their DNA-binding site specificity as well as dimerization properties, which has helped classify them into different groups and subfamilies, respectively.
You can also add sub-section(s) at will.
Labs working on this gene
- Interdisciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India
References
- ↑ Nijhawan A, Jain M, Tyagi AK, Khurana JP. Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice. Plant Physiol. 2008 Feb;146(2):333-50. PubMed PMID: 18065552; PubMed Central PMCID: PMC2245831.
