Difference between revisions of "Os08g0224700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0224700| Description = Similar to 26S proteasome subunit RPN2a| Version = NM_001067813.1 GI:115475362 GeneID:4344971| Length = 5380 bp| De...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os08g0224700|
 
−
Description = Similar to 26S proteasome subunit RPN2a|
 
−
Version = NM_001067813.1 GI:115475362 GeneID:4344971|
 
−
Length = 5380 bp|
 
−
Definition = Oryza sativa Japonica Group Os08g0224700, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
+
Please input expression information here.
−
AP = Chromosome 8:7590567..7595946|
+
 
−
CDS = 7590673..7590824,7591767..7591936,7592034..7592148,7592234..7592402,7592532..7592666<br>,7592756..7593075,7593339..7593474,7593571..7593819,7593914..7594134<br>,7594253..7594511,7594611..7595318,7595442..7595771|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008401:7590567..7595946
+
 
−
source=RiceChromosome08
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008401:7590567..7595946
+
 
−
source=RiceChromosome08
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggcggcggcggcggtgatggtgagctcggcgagcgggctgctggcgatgctgcaggagccggcggcggagctcaagctgcacgcgctcgccaacctcaactccctcgtccacgtcttctggcccgagatctccaccagcgtccccgccattgagagcttatatgaagatgaggaattcgaccagaggcagttggcagcattggttgtttccaaggtgttttactaccttggtgaattagatgattctctgtcttacgcactcggtgctggaccactatttgatccctccgagggttcagactatgctcaaacacttttagcaaaagctttagatgaatatgccagcatccgatcgaagtccttgaaagcagcaggtgaaggggatgaaaaaatggacccaagattggaggcaattgtagagagaatgctggataagtgtatacttgatggaaaatatcaacaggccatgggtatgtctcttgaatgcaagagacttgataagctagaggaagcgatatctcgatccgataatcttaatggatctctttcttattccatcattctatctcatcaatatgttagtcaccgtgaatatcgctgtgagattctccgatgtcttgtaaaaatataccagacactgccaaatccggattacttaagcatttgccagtgtcttatgttcttgggtgagcctgaaactgttggaaacatcttgggcaagctgctttctggaagcaaggatgatgctctccttgcattccaaattgcttttgatcttgttgaaaatgaaaaccaggccttcctcctgaatgtgaaaaatcaccttgacacgctgagtttgcagacttctgcccagactttacctagcgatcaaactgctgctacagaaccatctggagatgcccaaatgacggatgatgctatcacaccaaatggaaatgcgcacactgtagatccaaatgaagtagcgcacgctgataggctgaccaaaattaaggggatactgtcaggggagacgtctattcagttgacattgcagtttttatacagtcataataggtctgatcttctgattttgaagactataaaacaagctctggaaatgaggaatagtgtttgtcatagtgcaactatatgttccaatgcaatcatgcatgcaggaacaacagttgataccttcctaagagaaaacttggaatggctaagtagggcaaccaactgggctaagttcagtgcaactgctggattaggtgtcattcatagaggccatctcacacaaggcagagctttaatggccccataccttcctcagagtggtgctgcaagtggtggtagtccatattctgaaggtggtgccctttatgctctgggtctgatccatgcaaaccatggtgaaggaatcaaacaatttcttcgtgagagccttcgcaacactagttctgaggtcgttcagcatggtgcttgtctgggacttggacttgcagctttaggcacagccgacgaggaaatatttgaggatgtaaagaatattctttacactgacagtgctgtggctggtgaggctgctggcattggcatgggcttgcttatggctggaacagccagtgagaaggctggagagatgcttgcctatgcacatgatacacagcatgagaaaattattcggggcttgtcacttggaattgcattgacagtttatggcagggaagaggaagctgacaccttgattgaacaaatgactagagatcaagatcccatactccgttatggtggtatgtacgcattggctctagcgtacaggggaactgcaaataacaaagctatccaccagcttcttcattttgcggtgtcagatgtgagcgacgatgtccggaggactgcagtattggctcttggttttgtcctgtacaatgagcctgagcagactccaagaattgtgtctctgctctctgaatcatataatccgcatgtccgttatggtgccgctttagctgttggaatatcctgtgcaggaacaggattaagtgatgccatctccttgttggagcctcttacatctgatgttgttgacttcgtgcggcaaggtgctctcattgcaatggcaatggtcatgatccaaactaatgaatcatatgactctcgtgttggaacattcaggcgtcagttggaaaagatcattctcgacaagcatgaggacaccatgagcaaaatgggtgccataatggctactggtatccttgatgctggtggtaggaacgttaccatcaggcttcagtccaggtcaaagcatgacaagctgactgctgttgttggccttgccgtcttcacccagttctggtattggtacccgctgacatatttcatcagcctggccttctctccgacggcttttattggcctcaactctgacttgaaagtgccgaagtttgagttcctgtcaaacactaaaccatcgctctttgattacccaaagccgacaacccaacaaaccacgactgcttcagttaagctgcctacggccatcctatcaacatatgccaaggcaaaatctagggcaaagaaggaagccgaaagcaaagctcaggagaaagcagaagcaccaccaagtgaagatgcttctacttcaatgcaggtcgatggtgtggcggagaagaaagcccctgagcccgaaccgaccttccagatcctgactaacccggcccgggttgtcccggcccaggagaagttcataaaattcctggagggcggcaggtacgagcctgtgaagctggcgccctccggatttgtcctcctacgggacctcaagcccaccgagacggaggaactagtcctcaccgacgccccggcaactcaggcgacgaacgccgcagccgccaccgctggccagcaaggctcaggcgccgccgccatggccgtcgacgaggagcccctgccaccccagccatttgagtacacctcgtga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MAAAAVMVSSASGLLAMLQEPAAELKLHALANLNSLVHVFWPEI                    STSVPAIESLYEDEEFDQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDPSEGSDY                    AQTLLAKALDEYASIRSKSLKAAGEGDEKMDPRLEAIVERMLDKCILDGKYQQAMGMS                    LECKRLDKLEEAISRSDNLNGSLSYSIILSHQYVSHREYRCEILRCLVKIYQTLPNPD                    YLSICQCLMFLGEPETVGNILGKLLSGSKDDALLAFQIAFDLVENENQAFLLNVKNHL                    DTLSLQTSAQTLPSDQTAATEPSGDAQMTDDAITPNGNAHTVDPNEVAHADRLTKIKG                    ILSGETSIQLTLQFLYSHNRSDLLILKTIKQALEMRNSVCHSATICSNAIMHAGTTVD                    TFLRENLEWLSRATNWAKFSATAGLGVIHRGHLTQGRALMAPYLPQSGAASGGSPYSE                    GGALYALGLIHANHGEGIKQFLRESLRNTSSEVVQHGACLGLGLAALGTADEEIFEDV                    KNILYTDSAVAGEAAGIGMGLLMAGTASEKAGEMLAYAHDTQHEKIIRGLSLGIALTV                    YGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTANNKAIHQLLHFAVSDVSDDV                    RRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSDAISLL                    EPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTFRRQLEKIILDKHEDTMSKMGA                    IMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQFWYWYPLTYFISLAFSPTAF                    IGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLPTAILSTYAKAKSRAKKE                    AESKAQEKAEAPPSEDASTSMQVDGVAEKKAPEPEPTFQILTNPARVVPAQEKFIKFL                    EGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDAPATQATNAAAATAGQQGSGAAAMA                    VDEEPLPPQPFEYTS</aaseq>|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
−
DNA = <dnaseqindica>107..258#1201..1370#1468..1582#1668..1836#1966..2100#2190..2509#2773..2908#3005..3253#3348..3568#3687..3945#4045..4752#4876..5205#gagctcttcttcttcccctcctccaagcaaaaggcaaaaaaagccgaagcagcgccgacgagacgagcatccaaatcgtcgaatccagcggcggcggaggcgggagatggcggcggcggcggtgatggtgagctcggcgagcgggctgctggcgatgctgcaggagccggcggcggagctcaagctgcacgcgctcgccaacctcaactccctcgtccacgtcttctggcccgagatctccaccagcgtccccgccatgtgagttgctccacccccacccaccttcagctgtagttttccctccccgccggcccgctgcgcccgatgcggcgtttcgcgcgattcggttcgattcgtggagtggggggttggggtttggtgctctatgtatgtgatgatgatgatttggatgagaggtggggttcggctaggaaggtgccgtgtggagggaggattcatgcgattagtgtcgtttggcctggttagattcgatctggcgatttttttggatgaaccctaggttggtttgatctgttaggctggagatttcgggaggggattataatgggcggttagtttcactggtactagaaaacctaggctttgtgtatggattatagataactcaaacttccctaactgttgtggttcattcatgtattattcttcgaggagttgctgtggtcgagaaaaaatattaattttttaaaaataatttgcgtttaggctcggattgccaaggcttttgtttgaagggttctaatgaagcataattttaatctgaaaacgagcaggtggagcctaggttgagacttctttttttctgtttattatggttggtttgaggaatatgcataatccttgactttgaagtgtctgaattgcaagactatacgcaggaacattttgtttgatctttagcgcttgtcctgtcaagtaaaaacattgagctaagacatgtgtcgtctcgtttcttgtttatgatttgttcatgggatttaatgggagctagatacattggaagaggcatgtccattaaatgttttggcagttgcaatttggtattatagtttctggaaattatgttctttattcattgtcacttaataacttggtagaacttaatattttcaaggacttctctattaagcatgaagtgtttctggttacttattttataatgttatatacttgttacagtgagagcttatatgaagatgaggaattcgaccagaggcagttggcagcattggttgtttccaaggtgttttactaccttggtgaattagatgattctctgtcttacgcactcggtgctggaccactatttgatccctccgagggttcagactatgctcaaacacttttaggtgaggaattgactaaattcattgcaatcttcttattttcatgttccaaagaaacaatattgacatagttttaaaatttgtttgttcctttcttcagcaaaagctttagatgaatatgccagcatccgatcgaagtccttgaaagcagcaggtgaaggggatgaaaaaatggacccaagattggaggcaattgtagagagaatgctggataagtatgatagaatcctcttatatcttctagtagctcatctgtaattaaatgcagttctcatctcattgatgcggaaactgtttcaggtgtatacttgatggaaaatatcaacaggccatgggtatgtctcttgaatgcaagagacttgataagctagaggaagcgatatctcgatccgataatcttaatggatctctttcttattccatcattctatctcatcaatatgttagtcaccgtgaatatcgctgtgaggtaagattacatcatggcagatttcaattgtaaagtctgtctcttagatttcttattggtatatacagcattcttcataaattttggaatgccataaaatgaccaagaacttatgtttgatctattcagattctccgatgtcttgtaaaaatataccagacactgccaaatccggattacttaagcatttgccagtgtcttatgttcttgggtgagcctgaaactgttggaaacatcttgggcaagctgctttctggaagcaaggtatgctggaaatatcttgtgtttttttttagttgtttaactgctgcttagtgtgtttatttgtcctaacatgtgcttttgctctacaggatgatgctctccttgcattccaaattgcttttgatcttgttgaaaatgaaaaccaggccttcctcctgaatgtgaaaaatcaccttgacacgctgagtttgcagacttctgcccagactttacctagcgatcaaactgctgctacagaaccatctggagatgcccaaatgacggatgatgctatcacaccaaatggaaatgcgcacactgtagatccaaatgaagtagcgcacgctgataggctgaccaaaattaaggggatactgtcaggggagacgtctattcagttgacattgcagtttttatacagtcataataggtactacctctgtcccaaaatatagccatttctagaatagtaccttgtctcaaaataaagttatttctccaactacctcctctcaaccaatcacacattttctccatcattcccacctactttcttaatatccgtgccaacctcaaaaatgctttacactttggcacggaggaagtaatgtgataatatctgacaaaattattgcagctggtcatgcatttaagttttgaatcttatgttgattttggtaattgatttgacaggtctgatcttctgattttgaagactataaaacaagctctggaaatgaggaatagtgtttgtcatagtgcaactatatgttccaatgcaatcatgcatgcaggaacaacagttgataccttcctaagagaaaacttggtacatttcatagtttacctatttgttaatgcagttctatgctcatgcatttttctccctttctgatcttcatttgcatataaccatctgttacaggaatggctaagtagggcaaccaactgggctaagttcagtgcaactgctggattaggtgtcattcatagaggccatctcacacaaggcagagctttaatggccccataccttcctcagagtggtgctgcaagtggtggtagtccatattctgaaggtggtgccctttatgctctgggtctgatccatgcaaaccatggtgaaggaatcaaacaatttcttcgtgagagccttcgcaacactagttctgaggtattttttcagggtcatggtctcttattttgtttagacagtccctatcactgtcatgaaaaaatattctaaactttcaaatattattgtacaggtcgttcagcatggtgcttgtctgggacttggacttgcagctttaggcacagccgacgaggaaatatttgaggatgtaaagaatattctttacactgacagtgctgtggctggtgaggctgctggcattggcatgggcttgcttatggctggaacagccagtgagaaggctggagagatgcttgcctatgcacatgatacacagcatgagaaaattattcggtaactattttttaaactcttggcaagcaagttcccactgtaatctagtactaggaatttgtttctcaagacggtaaatatgttcatgttctgatacactgactcctcttttctccaggggcttgtcacttggaattgcattgacagtttatggcagggaagaggaagctgacaccttgattgaacaaatgactagagatcaagatcccatactccgttatggtggtatgtacgcattggctctagcgtacaggggaactgcaaataacaaagctatccaccagcttcttcattttgcggtgtcagatgtgagcgacgatgtccggaggactgcagtattggctcttggttttgtcctgtacaatgagcctgagcaggttagctttaccttattgattctttttattgtcaagattcttgtttgatttgagtcacttaatttgagcctgacttgcctagaattattttcaatgcagactccaagaattgtgtctctgctctctgaatcatataatccgcatgtccgttatggtgccgctttagctgttggaatatcctgtgcaggaacaggattaagtgatgccatctccttgttggagcctcttacatctgatgttgttgacttcgtgcggcaaggtgctctcattgcaatggcaatggtcatgatccaaactaatgaatcatatgactctcgtgttggaacattcaggcgtcagttggaaaagatcattctcgacaagcatgaggacaccatgagcaaaatgggtgccataatggctactggtatccttgatgctggtggtaggaacgttaccatcaggcttcagtccaggtcaaagcatgacaagctgactgctgttgttggccttgccgtcttcacccagttctggtattggtacccgctgacatatttcatcagcctggccttctctccgacggcttttattggcctcaactctgacttgaaagtgccgaagtttgagttcctgtcaaacactaaaccatcgctctttgattacccaaagccgacaacccaacaaaccacgactgcttcagttaagctgcctacggccatcctatcaacatatgccaaggcaaaatctagggcaaagaaggaagccgaaagcaaagctcaggagaaagcagaagcaccaccaagtgaagatgcttctacttcaatgcaggtaagagctacagtgctaactacctaccttgttccttttttgccaccttgttcatgtctttgctacacaatgacatgttatagtctccaaattactcatgctggtctcaatccatgaattcaggtcgatggtgtggcggagaagaaagcccctgagcccgaaccgaccttccagatcctgactaacccggcccgggttgtcccggcccaggagaagttcataaaattcctggagggcggcaggtacgagcctgtgaagctggcgccctccggatttgtcctcctacgggacctcaagcccaccgagacggaggaactagtcctcaccgacgccccggcaactcaggcgacgaacgccgcagccgccaccgctggccagcaaggctcaggcgccgccgccatggccgtcgacgaggagcccctgccaccccagccatttgagtacacctcgtgatcccttgatgatcccagggctaaacacttgtactgtttgtttctaacttggtagccatgatggaatcaaatgtttctttcacaaagcttatgaattgattctttccattgatttactggtttagtgtgtggaaaaattgttggtattagtcaccagagtaaaatatttcacctgc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067813.1 RefSeq:Os08g0224700]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 8]]
 
−
[[Category:Chromosome 8]]
 

Latest revision as of 12:58, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information