Difference between revisions of "Os08g0337300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0337300| Description = Zinc finger, FYVE/PHD-type domain containing protein| Version = NM_001068115.1 GI:115475967 GeneID:4345309| Length =...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os08g0337300|
 
Description = Zinc finger, FYVE/PHD-type domain containing protein|
 
Version = NM_001068115.1 GI:115475967 GeneID:4345309|
 
Length = 5797 bp|
 
Definition = Oryza sativa Japonica Group Os08g0337300, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
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Please input expression information here.
AP = Chromosome 8:15203017..15208813|
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CDS = 15203425..15203834,15203925..15204021,15204692..15204739,15204830..15205053,15206614..15206710<br>,15206803..15206898,15207544..15207791,15207879..15207962,15208034..15208487<br>|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008401:15203017..15208813
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source=RiceChromosome08
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008401:15203017..15208813
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source=RiceChromosome08
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atgatgtcatcggacgacgaccttgagccgcagctcaaggcggtggagaattactacttcgttgacgacaacgatgtgccggtatccttcgatgtcctgccgttccagttcgatgcggccgagggggtcgcgtcgttcaagaaggatgtgtacctgcgggggttcaccgacggcggcctccagaaagtctacaagcaggtggttgcctggaagctagtcctagatggagactcgcctgagatcgcggtgctttcgacggagggcagttggattgccctgctgaagccgaggcctagctacgaggagaccatccggtctgtactgatcactgtcgaaatgcttcacttcgtccgaaggaggccaacggattccgagaaagacatgtgggatcacctctatggggtttttgagagatttgtggttaggcccttagaagatgactttgctaatcatcagaatttaataaaactctttgctcagagggacccagatttagcaaattcacaggttttgcaagtcttcatcaaagacaagattatggaaaagaccaatgaggttggttcaaataatctggataataaacgagagccagacattaaacaagagccagacattaaacaagagccggttgctgctggtgatgaaatggaggagatagttgaagaaggcattccagatgcaccaagcaatgatgatgatgatgatgaagaggatgaggaggatggagatttgtttgattcagtttgtgctatctgtgataatggaggggagctgttatgctgtgaaggtccgtgtatgaggtccttccatgcaaaaataagagatggtgaagattcttactgtgcaaccctagggtacacaaaggcagaagtcaaggcactaaaaaattttgtgtgcaagaattgtgaccataagcagcaccaatgctttgtctgtggagagttggagccttcggatgggccaaatgccaaggtatttctctgtaataatgcaacctgtgggcatttctaccacccaagatgtgttgcgcaattgcttcatcctaacagcagaaatgaggcttccgaaatggagaaaaagattatggctgggttttcatttacatgccctgtacattggtgctttcattgtaaaggtctagaagacaggactcaagaaccactgcaatttgctgtttgcagacgctgcccaagatcgtatcatagaaaatgcttgccaagggaaatttcctttgaagatattaacacgcagggcatcataacccgtgcatgggagctttcaaaaagaattctgatctactgcttggaccatgaaatagaccttgatattggaacaccacccagagaccatataaagtttcctcatgttgaaaaatcagcttattctgcaaagaagaaagtcaaagaattagctgagaagaaaagacggatttgtgatgattcatatgtttctgaacctttacagaagcgcgcaaagttaaatgagaagtttaatgcaaaaggtgacaaatctaaaaaagctggtgtgaaaagtgaatttgaggaagttcttgaatctgaaaagaaaaaaacaaggagcctgaaaaagagaacacagcctgaagaacctttggttgagtgtgctgctgctgctgctgcaaacaatgcaaatcgacctgtgaaagaacgagaaaaagaattagggacttcatcgttggatatggggaagatacctcttagctctttccctattgtggatagtgaaacggagaagaggtga</cdnaseq>|
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==Structured Information==
AA = <aaseq>MMSSDDDLEPQLKAVENYYFVDDNDVPVSFDVLPFQFDAAEGVA                    SFKKDVYLRGFTDGGLQKVYKQVVAWKLVLDGDSPEIAVLSTEGSWIALLKPRPSYEE                    TIRSVLITVEMLHFVRRRPTDSEKDMWDHLYGVFERFVVRPLEDDFANHQNLIKLFAQ                    RDPDLANSQVLQVFIKDKIMEKTNEVGSNNLDNKREPDIKQEPDIKQEPVAAGDEMEE                    IVEEGIPDAPSNDDDDDEEDEEDGDLFDSVCAICDNGGELLCCEGPCMRSFHAKIRDG                    EDSYCATLGYTKAEVKALKNFVCKNCDHKQHQCFVCGELEPSDGPNAKVFLCNNATCG                    HFYHPRCVAQLLHPNSRNEASEMEKKIMAGFSFTCPVHWCFHCKGLEDRTQEPLQFAV                    CRRCPRSYHRKCLPREISFEDINTQGIITRAWELSKRILIYCLDHEIDLDIGTPPRDH                    IKFPHVEKSAYSAKKKVKELAEKKRRICDDSYVSEPLQKRAKLNEKFNAKGDKSKKAG                    VKSEFEEVLESEKKKTRSLKKRTQPEEPLVECAAAAAANNANRPVKEREKELGTSSLD                    MGKIPLSSFPIVDSETEKR</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
DNA = <dnaseqindica>409..818#909..1005#1676..1723#1814..2037#3598..3694#3787..3882#4528..4775#4863..4946#5018..5471#gagtcgaatcgaaaccgaagccagaatctctctagggttcgttcccttctcgcgatcctcccccacctctcacctcccgcgccccagtctccgtccgccggttaatctcgatccctcccccaccgcgggtgtgccctcctcgctctctttttttagggatttttttctagggttttggtagaattttgggtcttcagttgtttctagtccccttcaggcgatttagttgggtatccttttctccgtggaattccccatgtggtttcttcttcgatgggaatcctctgctttgcttggacgcataataagatgattcgtttatgaatcttgtgcaatgcgcctgatttttcatttctctttgtttttttttgcccccctcagatcgcggattgggatactgcggcgaccatgatgtcatcggacgacgaccttgagccgcagctcaaggcggtggagaattactacttcgttgacgacaacgatgtgccggtatccttcgatgtcctgccgttccagttcgatgcggccgagggggtcgcgtcgttcaagaaggatgtgtacctgcgggggttcaccgacggcggcctccagaaagtctacaagcaggtggttgcctggaagctagtcctagatggagactcgcctgagatcgcggtgctttcgacggagggcagttggattgccctgctgaagccgaggcctagctacgaggagaccatccggtctgtactgatcactgtcgaaatgcttcacttcgtccgaaggaggccaacggattccgagaaagacatgtgggatcacctctatggggtttttgagtatgtgctaaatacattatttactttatttgtttttgggtagtcataattaggtcctaatgaccttactagtgctttcttgcatcacaggagatttgtggttaggcccttagaagatgactttgctaatcatcagaatttaataaaactctttgctcagagggacccagatttagcaaattcacaggtatgcgattcttcaaattcttattgtgggctacttggagttcaggtgaatttttgtgttccataggatttagtccaaaatgtgtactggtaaattctgtcatattgcatacagacaaattgtgtcatgtcccctcataacttcttgaagtatttcccatacaatgggttccttgtcccaaattttccttttagcaatcctaacattagaagtagcacgtttcgtgattaaatcgcgaattacaaatagctgaaaaagctttattgctatctctagaggtaaaacccacattgatgtaataatgaaagtgaaggacccacaacaatgacaacgccccgagtaaagatgacctgatttatattgcaggatttacagcttttgctgtaccatcgtaataggtcagcgtcagtgtcaaagttatcttttactgtccatgccgccccccttgtacttatcagacatgctgttcgcttttagcactcccgcttgtttttgcattctgtatacttattattttattgcatgcctgcacccatagcacttgtttcttgtactgcttatttcatccttgcaccatttaccaattttacggttttagcaacgtacatctaacatctcttaaaattctttatttattgctcacaagattatctttcataatttctggcaggttttgcaagtcttcatcaaagacaagattatggaaaagaccaatgaggtagctcaggtttctccttcctaatactttagtggcctttaaagtatttatttagtctctctattcacttttcttttgattttcaactaggttggttcaaataatctggataataaacgagagccagacattaaacaagagccagacattaaacaagagccggttgctgctggtgatgaaatggaggagatagttgaagaaggcattccagatgcaccaagcaatgatgatgatgatgatgaagaggatgaggaggatggagatttgtttgattcagtttgtgctatctgtgataatggaggggagctgttatggtatgcgctcttctactttccttaagtgccatcaagtattttcatgacctacatgcatattacagaaacttaggaattagcaggacttctaaggatgatacgtatgaaactttttagtaactaaatctacttcgtgacaaaatataaattaatagttgtacatcatatcctttttatttcttgtttcataggtgcacttaacatcgctctacgtcgaggatacacaactttgatgcataacatttttacttgtggtagtatttgttgtgaatcactgtatagctaatttcaaaacaaaccccagctgggcaagcatttatagatgttcatgtaaagatctagttgtctatgctttttatcagtacctgattatctgcggaggagtttccagacattgcagggtgctagtatgtaaattctgtcatttattgaaacatgttcctttctacacttgggagataaatctgttaggttgattcagtatttccatgcgttaagtacaaaaaaaaaaagacctacagtttggttgttcttggaaactgacacaagtatcaattggccaaggatagattggcactagaaagtacaaatgcttgtgttatgagtaaagatcaggtaatctgtactttctgttcaggccgtgttatggttatcatggtttttgctttgaggccttatgggcttatgtgcggaccatgttgctgcagtttccacaaaagaaacagaaaaagaaataaaagaaggtggaagtggcaaataagagaagataaaaacaaaccagtggcaaacaagggaacattaattttctgatggaaaacaagggattgggttaatgttcaatactccctccgtcccataatataagggattttgggtggatgtgacatatcctagtacaatcaatctggacatacggtatgtccagatttattgtactatcatgtgtcacatccacccaaaatcccttatattatatgacggagggagtagtaaataaggaattttttccatgattggaggagcaagggtgctataccttacaaacattttgtagctttggtcaagatttggccttcacttggtaagtttccaactttggtaaggttgcactgaagagtgcttcctttccaaaacttggccagttcatggactaagcaagctttggtaattccaattttccataagatatcataatgggaattctatttatgtacatgcacaattgtaagcatcgaagtgttttgtaattttgttcgaggactttaaaacagattgaagatgtgttgttttgtttgaatttgaatctttataaatcttcaagcacatttgaaatttgatgatggcaatagagcatgaaactgcatgtatatctaaacagagttattaacccacatgatatggaaaaacaaaattcttagcaaatgattcctgtttttatttttccctagaacagatggtgtatttttgttggataccatgaacatggaatattactatgttcctacatttttcatcagttttctgatctcaataatgtattcttgtgctggtttgttgtagctgtgaaggtccgtgtatgaggtccttccatgcaaaaataagagatggtgaagattcttactgtgcaaccctagggtacacaaaggcagaagtcaaggtagttcggaactttacttttaaagagcactgatacttcattcttgctcttttttccagattgtaatgttatacttttctaatgttttctaggcactaaaaaattttgtgtgcaagaattgtgaccataagcagcaccaatgctttgtctgtggagagttggagccttcggatgggccaaatgccaaggtatttgacttcatgaaacaaaaccttgtggatgtatgacagacatccttcatacaaaaggacaacatcctttttcttaaaaaaaagaaagacagttccaacttacaatatgcatcactggagaataaaaatcgttcatataattcatagtttgtggtagactggtagttttgtgtcacccttagatttttagcaccaagaatcattacaggcattgattgatttgtatagatggattcattgtcgatacttgggaacaacagttagctgccttgtcttcaatcaaaacaggataggtatgaatgaaataagagtgggaaggttggtttgtagctataggtaaaatacactagttcaccaatttccaactggttgtacaaattcttatactgcttgtaaaagggaaaaaaagcatcttctagcctctgtattctcgtactgtcttcaataggaaatggtagtacgcattgtgacttgccatcttctagttgagctttttaaacttaatttaataaaactaaatgccattttaataaaactacaaaagcttttccatacaagctgtcaagttgttcattatgagtctatcttaatcctaagtcatttttttaattttaaaatgttgacgcttgcaaatttctttaggtatttctctgtaataatgcaacctgtgggcatttctaccacccaagatgtgttgcgcaattgcttcatcctaacagcagaaatgaggcttccgaaatggagaaaaagattatggctgggttttcatttacatgccctgtacattggtgctttcattgtaaaggtctagaagacaggactcaagaaccactgcaatttgctgtttgcagacgctgcccaagatcgtatcatagaaaatgcttgccaaggttttattttttacatttttagttccctgtctgagttcattgcatatgacattccttggtcttctcactcctgaaattattttacagggaaatttcctttgaagatattaacacgcagggcatcataacccgtgcatgggagctttcaaaaagaattctgatctactgcttgtatgtaaactttcttgtgatatttctgttctgattgcatggagaaactaacatctgattaactgttacagggaccatgaaatagaccttgatattggaacaccacccagagaccatataaagtttcctcatgttgaaaaatcagcttattctgcaaagaagaaagtcaaagaattagctgagaagaaaagacggatttgtgatgattcatatgtttctgaacctttacagaagcgcgcaaagttaaatgagaagtttaatgcaaaaggtgacaaatctaaaaaagctggtgtgaaaagtgaatttgaggaagttcttgaatctgaaaagaaaaaaacaaggagcctgaaaaagagaacacagcctgaagaacctttggttgagtgtgctgctgctgctgctgcaaacaatgcaaatcgacctgtgaaagaacgagaaaaagaattagggacttcatcgttggatatggggaagatacctcttagctctttccctattgtggatagtgaaacggagaagaggtgagtcagttggatatattgtttcatgtaaacagactataacagcgagggcaacagaatatttttcttctcctcaaggcaaatatgttagtggttggtgatggatgctatttcgtttagagtataattgaacatagctcatcaagccaatccttctttccttctatgtctaccttctacatcctactaaatccctgagcaaaacccaggccaagcagggctgatgtaaaataggcataaagttggatttgctaagttttgtctactttcgctagacagcctatcgtttacgcattctccattaaaaaaagtgaagtcacattctccatt</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068115.1 RefSeq:Os08g0337300]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 13:02, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information