Difference between revisions of "Os08g0398000"

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(Created page with "{{JaponicaGene| GeneName = Os08g0398000| Description = ABC transporter related domain containing protein| Version = NM_001068277.1 GI:115476291 GeneID:4345497| Length = 62...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os08g0398000|
 
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Description = ABC transporter related domain containing protein|
 
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Version = NM_001068277.1 GI:115476291 GeneID:4345497|
 
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Length = 6203 bp|
 
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Definition = Oryza sativa Japonica Group Os08g0398000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
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Please input expression information here.
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AP = Chromosome 8:19048132..19054334|
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CDS = 19048455..19048709,19048915..19049091,19049176..19049256,19049343..19049657,19049740..19049883<br>,19049980..19050069,19050154..19050230,19050312..19050429,19050511..19050737<br>,19050828..19050987,19051072..19051272,19051361..19051456,19051627..19051812<br>,19051888..19052057,19052291..19052522,19053899..19054276|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008401:19048132..19054334
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source=RiceChromosome08
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008401:19048132..19054334
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source=RiceChromosome08
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggagctcctgagcggggcggcgctggcgtggcagcagtaccgcgccctcctccgcaagaacgccacgctcacctggcgccaccgccgctccgcctccctccagctcctctcctcgctcgtcttcatcttcctcatcttctgcatcgaccgcgccatccgctcccgcttctcctacaccaccgcctaccgcaacgtccccgacccggccgccctcgtcgccccgcccatcccgccctgcgaggacaagtacttcgtcagggagccctgctacgacttcctctggagcggcggcggcggcgccgggagcgcacgcgtcgccgggatcgtcgaggccatccggaggaacaaccccggcaggccgatccccgccgagaaggtcttgggttttaatactccagatgaagttgatgcttggcttttccaaaatccaatgcgctgccctggcgccttacattttcaagttataaacgacactcagataaagtatggtattcagacgaactccactccggtagctcggagaggaacatatgaggatcctaccttcaagttccagataccacttcaaattgcagctgagagggaaatggcgaggctgctgattggagacccaaattttagctggactgtggggttcaaggagttcgctcacccagctacagaaaccttctctactattgcccaagctgggccaactttcttccttgctattgctatgttcggattcgtttttcaaatcagtgcgttggtgacagagaaagagcttaagcttcgtcaggctatgtctatcatggggctctacgagtcagcgtattggttgtcttggttaacctgggaggctttcgtcacattactttcagcacttcttactgtgctctttgggatgatgttccagtttgacttctttctgcacaataactttgggatcctattcctcctcttctttctcttccaactgaacatgcttagttttgccttcatgatatccacatttgtaacaaaagcagcatcagctactactgttggatttgcaatattcattattggcttcttgacacaacttgttacaacctttgggttcccatattcaacttcctaccagaagtactaccggacaatatggtccttgtttccacctgatgtttttgcccaagccctcaatattctgggcaaggcaacggccactcctgaagacaaaggaatcagctggaatcagcggggacaatgccaatcttttgagacagattgcgtcattactattgatgatatctacaaatggctcatctccacatttttcttgtggtttgtcctggcgatctactttgacaacataattccaaatgtcaatggtgttcgaaagtcagtgttctactttctgatgccttcatactggacaggaaaaggaggaggaaagttgcaagagggaggactctttagcttttttggttcgaaccgcccagctgatgatgcttctcctactgatgaggatgttattgctgaggaaaatctagtaaaacaacaagctgcaaacaatgaagtagatcctggtgttgcagttcaaatatgtggtttgcggaaaacatatccagggagttttagtatgggttgctgcagatgcaggacaactaaaccgtttcattctgtcaaaggtttatgggtgaaccttgagaaggaccagttattttgccttcttgggcccaatggagctggtaaaacaacaacaatcagttgcttgactggaatcacaccaattacaggcggcgatgcgatgatttatgggcattctgttcgaagcactgctgggatgtcgaatattcggaggatgataggagtctgtccgcagtttgacatcttgtgggatgcgctaacagctaaagagcacatggagctgtttgctagcattaagggactgcctccatcaacaatcaagtcggtagcagaacaatccttaatccaagtgaagctcagccaggcagctaatgttagagcaggtagctacagtgggggaatgaaacgccggctaagtgttgcaatagctctaattggtgatccaaaattggtctttcttgatgaaccgactactggcatggatccaataacaaggaggcatgtctgggacatcatagaggaagcaaagaaaggaagagctattgtcttgaccacccattccatggaggaagctgacattctgagtgacaggatcgcaatcatggctaaagggaaattgcggtgcattgggacttcaattaggctgaagtcgaaatttggaacaggatatattgctaatgtgaatttctctggaaatggtcacacacaaagccctaacatcaacggcaacactgaagtcccggttaaccctaacatagaatctgtcaaatggttcttcaaggaacggcttgatgtggacccaaaagaggagagcaggacattcttaacgttcgtcatcccccatgagaaagaaccacttctgacgaggttctttggggaactccaagacagggaacgggaattcggtatctcagacattcaactcggcctcacgacgctcgaagaagtattcctgaacatcgcaaagcaggcagaactggagagctctactgctgaaggcaccctggttactctgaacctatcatcaggttcatctattcagataccaaagggggctcgttttgtcggaattcccggaaccgagtcggaggatcacccaagaggcgtgatggttgaagtttactgggatcaagatgacaatggatcactctgcatttctggtcactctgatgaaatccctgtcccagccaatgttcagctgggtcggcccccttcgctgtctcgtagggcctcagtgggccgtggaaaccctgttgggtacatcattgatccgaatgaggtcacagcagcaagatga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MELLSGAALAWQQYRALLRKNATLTWRHRRSASLQLLSSLVFIF                    LIFCIDRAIRSRFSYTTAYRNVPDPAALVAPPIPPCEDKYFVREPCYDFLWSGGGGAG                    SARVAGIVEAIRRNNPGRPIPAEKVLGFNTPDEVDAWLFQNPMRCPGALHFQVINDTQ                    IKYGIQTNSTPVARRGTYEDPTFKFQIPLQIAAEREMARLLIGDPNFSWTVGFKEFAH                    PATETFSTIAQAGPTFFLAIAMFGFVFQISALVTEKELKLRQAMSIMGLYESAYWLSW                    LTWEAFVTLLSALLTVLFGMMFQFDFFLHNNFGILFLLFFLFQLNMLSFAFMISTFVT                    KAASATTVGFAIFIIGFLTQLVTTFGFPYSTSYQKYYRTIWSLFPPDVFAQALNILGK                    ATATPEDKGISWNQRGQCQSFETDCVITIDDIYKWLISTFFLWFVLAIYFDNIIPNVN                    GVRKSVFYFLMPSYWTGKGGGKLQEGGLFSFFGSNRPADDASPTDEDVIAEENLVKQQ                    AANNEVDPGVAVQICGLRKTYPGSFSMGCCRCRTTKPFHSVKGLWVNLEKDQLFCLLG                    PNGAGKTTTISCLTGITPITGGDAMIYGHSVRSTAGMSNIRRMIGVCPQFDILWDALT                    AKEHMELFASIKGLPPSTIKSVAEQSLIQVKLSQAANVRAGSYSGGMKRRLSVAIALI                    GDPKLVFLDEPTTGMDPITRRHVWDIIEEAKKGRAIVLTTHSMEEADILSDRIAIMAK                    GKLRCIGTSIRLKSKFGTGYIANVNFSGNGHTQSPNINGNTEVPVNPNIESVKWFFKE                    RLDVDPKEESRTFLTFVIPHEKEPLLTRFFGELQDREREFGISDIQLGLTTLEEVFLN                    IAKQAELESSTAEGTLVTLNLSSGSSIQIPKGARFVGIPGTESEDHPRGVMVEVYWDQ                    DDNGSLCISGHSDEIPVPANVQLGRPPSLSRRASVGRGNPVGYIIDPNEVTAAR</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
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DNA = <dnaseqindica>5626..5880#5244..5420#5079..5159#4678..4992#4452..4595#4266..4355#4105..4181#3906..4023#3598..3824#3348..3507#3063..3263#2879..2974#2523..2708#2278..2447#1813..2044#59..436#aactccctccccctccaagaagcgaacaagccaagaactcctccaactccgccctccaatggagctcctgagcggggcggcgctggcgtggcagcagtaccgcgccctcctccgcaagaacgccacgctcacctggcgccaccgccgctccgcctccctccagctcctctcctcgctcgtcttcatcttcctcatcttctgcatcgaccgcgccatccgctcccgcttctcctacaccaccgcctaccgcaacgtccccgacccggccgccctcgtcgccccgcccatcccgccctgcgaggacaagtacttcgtcagggagccctgctacgacttcctctggagcggcggcggcggcgccgggagcgcacgcgtcgccgggatcgtcgaggccatccggaggaacaaccccggcaggccgatccccgccgagaaggtgatttgtggatttagattcatcttttttttctgtacttgtctctttgtatctatgtggatttcggttgggaatagaagattcggttttctctctgttcttgtagattgggcgcgattggttgtgtgatttgggcatgcaggttctggttgattagtttgggttgcgagtaatttcgctcaagcacgtttggtgtgaggattttgggtttttggtggagaaagatttgctctttttttttgggcgtattttgtggtggcaaaacgctatgatacatactgaatttgggtatttttattgttagtggttagcctcttgaaagaggggaattcgaagcattttgagggtgtatattgtatcttaggcacgtctgcttcttcggtttctgcatttctgaattatatattcccctattcctgcaaatattcttttagtccttcgaactggttgagtttgaaaccttagcatgcgtgtttcacagccagggagagatgtacttgtgaattctgagcaaaaatttgatattgagaatttgaaaaggagagattgattctaattcaaactcttttttttttaaaaaaaataaaataaagcgaagttctaataatctttaattctttttggagcagacatgccgatttgacgtttaactgagatagtctgaatttgcaattttagtttgtcatttgttccgtgtggggatgtcagcggtaagtactcacctagatggtggaccttgcgaacttttcaaagaagtatgaaaacgatgtttattttgttgtcaacgtggattaggaagcatcggagttcactaggaacatctaacttcatttaagcttgtcgtaagcacacttgatgtcattttcgtggtatggtactagtgcgtggcttcttgatacattgcgtataaagccttgtcttgctggaaataaagatggtcgcattgtgcgttggaaatttttaccgggaatatactaattcttttttttttttgggagaactaccggttgattgatacaagtacacatttaagtagtgttggtcttttgtataagaacatgcatacttttcttatttcctaatgaatattcaaattatgatgatctgagagtaaacgctgaaattctgctgtctaaaacttacacaaaatttatagaacttcctgtttgcgtgaggatttgattacataatttatttgcgcgccttcatatatccattcattaccaatcgacataagcttggctttagtggtactggtaaactgcaaacgcagtatgcactagtagtttcttctatactgcttaaataagattcatgaccccagaattattgttacactgaacatgtcgtctgactgtttctgctaaatttctcaggtcttgggttttaatactccagatgaagttgatgcttggcttttccaaaatccaatgcgctgccctggcgccttacattttcaagttataaacgacactcagataaagtatggtattcagacgaactccactccggtagctcggagaggaacatatgaggatcctaccttcaagttccagataccacttcaaattgcagctgagagggaaatggcgaggctgctgattggaggtattgctacttccatgccttttttgttacttctgtgctttgtacttggtaccacttatgtcataccctttgacatcaattccggttgttcagtaattcatgaagccttttgactagattaatttgaactatttatggtatgctgcaaaaatagttgttagctgtatgtatgcttctgtttgatagttgtcttggcaaataacagtatatatttatactgatgaatgtgacagacccaaattttagctggactgtggggttcaaggagttcgctcacccagctacagaaaccttctctactattgcccaagctgggccaactttcttccttgctattgctatgttcggattcgtttttcaaatcagtgcgttggtgacagagaaagagcttaagcttcgtcaggttcgagctcccccatactctgcctgtgttgtaagatttacatgacaccactcaaagtttggttaataattgcaggctatgtctatcatggggctctacgagtcagcgtattggttgtcttggttaacctgggaggctttcgtcacattactttcagcacttcttactgtgctctttgggatgatgttccagtttgacttctttctgcacaataactttgggatcctattcctcctcttctttctcttccaactgaacatggtaattttgacatactaaccatcagtctcctatctccatttaaaatgttaaatttagataataaaaacatgcttgcatggttggtttttacacatttcctgattcctgttacaacttgcaaaagaaagaagtttttaacatattgtcctcattcatgatgcttgctgcagcttagttttgccttcatgatatccacatttgtaacaaaagcagcatcagctactactgttggatttgcaatattcattattggcttcttgacacaagtaagttttctgaattgtaatactatggatccagtacttcaatttctcagaacaagtgtgtgaattctttaattttcttgttgtgcagcttgttacaacctttgggttcccatattcaacttcctaccagaagtactaccggacaatatggtccttgtttccacctgatgtttttgcccaagccctcaatattctgggcaaggcaacggccactcctgaagacaaaggaatcagctggaatcagcggggacaatgccaatcttttgagacagattgcgtcattactattgtacgtacgaatcattgcttattggatattatgttcttaaaccttatgcaaatatcaatctgaatgttcacaacgatctcataggatgatatctacaaatggctcatctccacatttttcttgtggtttgtcctggcgatctactttgacaacataattccaaatgtcaatggtgttcgaaagtcagtgttctactttctgatgccttcatactggacaggaaaaggaggaggaaagttgcaaggtcaggactgtttgaagttcttggtagttctggacaatgttctagctatagtttcttgcattacttgctaatctgtatgctccattacagagggaggactctttagcttttttggttcgaaccgcccagctgatgatgcttctcctactgatgaggatgttattgctgaggaaaatctagtaaaacaacaagctgcaaacaatgaagtagatcctggtgttgcagttcaaatatgtggtttgcggaaaacatatccagggagttttagtatgggttgctgcagatgcaggacaactaaaccgtttcattctgtcaaagtaagtccatatgtcacttcttgttgtgtaaaacatggaagatttgcttattctgattactgattacaaaaaattctccagggtttatgggtgaaccttgagaaggaccagttattttgccttcttgggcccaatggagctggtaaaacaacaacaatcagttgcttgactggaatcacaccaattacaggcggcgatggttggtatctttcttaaaagcaaaagcttgtatagttgtattgttttgtaatatctaataagccattttgaacattggcagcgatgatttatgggcattctgttcgaagcactgctgggatgtcgaatattcggaggatgataggagtctgtccgcaggtaggtgctttaaacattgttatattactgatgcatgtgaattgatcaaaggaagataaacattcgtgatttatttctttgcagtttgacatcttgtgggatgcgctaacagctaaagagcacatggagctgtttgctagcattaagggactgcctccatcaacaatcaagtcggtatgtttctttagaactgattacacgtactcctccctaaagcacttaatttaattgtcttgcattgatcttcctctgattgttcaaccaatgcaggtagcagaacaatccttaatccaagtgaagctcagccaggcagctaatgttagagcaggtagctacagtgggggaatgaaacgccggctaagtgttgcaatagctctaattggtgatccaaaattggtctttcttgatgaaccggtaaagaccgccaaatttgctacaaacttccttccaaacatcccttatcatgtgctgatctaacaatgtatatcctacacagactactggcatggatccaataacaaggaggcatgtctgggacatcatagaggaagcaaagaaaggaagagctattgtcttgaccacccattccatggaggaagctgacattctgagtgacaggatcgcaatcatggctaaagggaaattgcggtgcattgggacttcaattaggctgaagtcgaaatttggaacaggatatattgctaatgtgaatttctctggaaatggtcacacacaaagccctaacatcaacggcaacactgaagtcccggttaaccctaacatagaatctgtcaaatggttcttcaaggaagtatgtggctcatcactaaattctatatccttcaaaattatcttttcatatagtagagctggaaatcatgtgaaatttattgacagcggcttgatgtggacccaaaagaggagagcaggacattcttaacgttcgtcatcccccatgagaaagaaccacttctgacggtactgcttcctcacccaaaactctggctgtcataacatcatgctttaatttcatgataggctaatatattttccattaagcagaggttctttggggaactccaagacagggaacgggaattcggtatctcagacattcaactcggcctcacgacgctcgaagaagtattcctgaacatcgcaaagcaggcagaactggagagctctactgctgaaggcaccctggttactctgaacctatcatcaggttcatctattcaggtttgttccttagtacccctaagaacaatgctgcaatattggacatgaaaaggataatctcactgctatgtagagaacttctgtacagcagcaacagtacagaaaactctgaaacttgctgctatgctgtaatttgattgtgtgatttcttcagaaaactctgaatatctctttgatatcacttccattttctatggcaatgcagataccaaagggggctcgttttgtcggaattcccggaaccgagtcggaggatcacccaagaggcgtgatggttgaagtttactgggatcaagatgacaatggatcactctgcatttctggtcactctgatgaaatccctgtcccagccaatgttcagctgggtcggcccccttcgctgtctcgtagggcctcagtgggccgtggaaaccctgttgggtacatcattgatccgaatgaggtcacagcagcaagatgagtgccaaagaaagaagaatattctgagagtggatgaatttagatttgtcttcatgtaaattatctctaggtgtaatgcaactatagatatgtttgtactagaacagtgtattttttctgttttgtggtaaaggaagtgcttgatgatagatacaacatgcttacatcttccatttggtggctgacaaagagcttgacgattacagatgcaagaatgacaggaatttttacagtgatttaatttgttgcattcaggacggtaggatgtctggggtccttgttttgtcgctcataatttattttttttgttcatgggtgaagtat</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068277.1 RefSeq:Os08g0398000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 8]]
 
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[[Category:Chromosome 8]]
 

Latest revision as of 13:04, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information