Difference between revisions of "Os08g0478500"

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(Created page with "{{JaponicaGene| GeneName = Os08g0478500| Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein| Version = NM_001068586.1 GI:115476909 GeneID:4...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os08g0478500|
 
Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein|
 
Version = NM_001068586.1 GI:115476909 GeneID:4345840|
 
Length = 7431 bp|
 
Definition = Oryza sativa Japonica Group Os08g0478500, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
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Please input expression information here.
AP = Chromosome 8:23681707..23689137|
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CDS = 23681799..23682471,23682649..23682710,23682982..23683197,23683372..23683456,23684479..23684636<br>,23684752..23684872,23685328..23685490,23685577..23685662,23685907..23685989<br>,23686063..23686924,23688513..23688940|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008401:23681707..23689137
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source=RiceChromosome08
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008401:23681707..23689137
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source=RiceChromosome08
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atggcggaggcggcgggttcgtcgtcgtcgtcgtcggcgtcggcggtggtggtggctgtggtgattgcggtggtggtggtggtgtgggttgtggtgcggcggaaggtgaggcgcgccgcggcgcggagggaggaggtgctgcggctcacgcggctggcgcaggaggagtcggagatggcggaggtggagtgcgcgcgcgcctactactcggagctgttcccgagcgtcgtgcacgcgacggagatggtggatgaggcggcgtggggggcgccgccggccgtggttccggctcaggcggaggcagaggcggagatggaggcccgggcccagccgcagccgcagccgccggtgggtgccaagggggtctgcgcggtgtgcttccggccgacgacgttcaggtgcaagcagtgcaaggctgtcaagtactgttccttcaaatgccagatagcccactggagacagggtcataaaaatgaatgccgcccaccaagcactgatgctaatcatgatgatgtggctgaactttctgttgcaaaggaaaggaaaattgagcagacaagtgcttctgaagaaaacatagctgaaaccaacacggcagccaccgtgaagaatttaaatgataaaacaaaagatatgccctcagaagtacttgcttcggtggaggttcctgatgatgaccattctgtcagtgcggtcaaactccctcaaagttcttcacaagtagcttctcttggcagtagaaagacagaatcaaatatgaaacctacaactcctgttgaaaatggttcttacacaaaggacttagatgaggcgttggtgtgtagatttcaaccttctccaccaaagattagtggctctggaagtcttatcaacaaagagtccttaattgattccaagaagcaccaggattgctctcaaactagtaacagcaaaaaatatgcagataacaacaatgctcaagctgctctacctgttgcagtagaacctaaaacttccaggactgctcttcatgtggaagttggacactccaagacaaaagctgctggctcagacaacattggtgtgtcaaaaatggtgccatctgttttgactgttgataaagtttctcctgttcccggtggacgttctgttacacctaattcatcaaaaagggctgataatattgctgaaaggaattctaaaccatcagagaaatcaatttcaacagcaaatagcctggcaacatctctgaaaaaaattgtcaggcagcaaacagcaccaaaagttgtgaggcattatccatcagagccaacacattttccatatgagcttttcattaagctctatgaaaaggttgaattgcaaccgtttggtcttcataaccttggcaatagttgctatgcaaatgctgttcttcagtgcttaatgtttacccgaccacttacatcatatcttttgggagggcttcattcaaaaaattgttccaaaaaggaatggtgcttcatgtgtgaatttgaaaaactcgttggggagggcagacaaggcaagattgctttgtcaccaactgggatactctctcatttgcctgacattggaagtagctttggtcctggtaaacaagaagatgctcatgaattccttaggtacgccattgatgctatgcaatctgtatgcatgaaggaagccaggaaaagcggcactcatcggttacacgaagaaacaacacttatgcaattaatatttgggggctatctgcgatctaagataagatgcacaagatgtgatgctacttccgagcaacatgagcgtattttggatcttactgttgaaatagatggcgacatcagttcactggaaggagcacttgagcgatttacatctacagaagtcttggatggagataataaatataaatgcagcagatgcaaatcgcatgagcgcgctaaaaagaagctgacaatatcggaagcaccaaatgtcctgactattgcgctgaaaagatatcagtctggaaagtttggaaagatcaacaaagccatcagatttccagagaccttgaacttgcagcgctatatgagcccaaaagctgatgacacttcccctgtttacagcctgtatgcagtggttgtccatcatgatattatgaatgccgccttttctggtcattatgtatgctatgtgaaggacacgcatgggaagtggtacaaaacagatgacagtcaggtcaaacctgtatctctggaaaatgtcatgtcgaagtgcgcatacatgctgctctatgcaaggtgttcaccaagagctccaagctctgtaaggccagcgctgatggctcaagatccagcacgtgtaaagaaggacaaggcaagggtaaattcaggacggtggcatggaggaggtcccatacaccaaggtggtcagatgtacgcagatcacatgacagatgatttgccccatacatatgacgagtttggacatggaccatattcgccagcagaatctcctagtccaagtgagagttcatcaattttcaccagttccgacacagggtcacatagcaccgacagcagtgaaagcactagaaactctaccagtgaggatatggaacgcctcatatttggtgatcaagtttcatactttgatggctctatgttcggacatggggaaaacggccgtatgacttattcccgatcaaagtctagcttgggtaccagttcatcgggtcaagaggtggatcagtataggcctgacgagcacaggcttcagggtgccagggagggttggaatcagggcgatgaaagttcttccttgtatactaaccaaagtaaacatcaatttagtagtaagttaacagaacaatataggaggaggttagatgggactgagcatgatcctggagaagccaatagtgttttattgaggagatcggctagggaaaggacggcccaaacattttattga</cdnaseq>|
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==Structured Information==
AA = <aaseq>MAEAAGSSSSSSASAVVVAVVIAVVVVVWVVVRRKVRRAAARRE                    EVLRLTRLAQEESEMAEVECARAYYSELFPSVVHATEMVDEAAWGAPPAVVPAQAEAE                    AEMEARAQPQPQPPVGAKGVCAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKNEC                    RPPSTDANHDDVAELSVAKERKIEQTSASEENIAETNTAATVKNLNDKTKDMPSEVLA                    SVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVCRF                    QPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRT                    ALHVEVGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERN                    SKPSEKSISTANSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKVELQPF                    GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQG                    KIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEE                    TTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVL                    DGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQ                    RYMSPKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSL                    ENVMSKCAYMLLYARCSPRAPSSVRPALMAQDPARVKKDKARVNSGRWHGGGPIHQGG                    QMYADHMTDDLPHTYDEFGHGPYSPAESPSPSESSSIFTSSDTGSHSTDSSESTRNST                    SEDMERLIFGDQVSYFDGSMFGHGENGRMTYSRSKSSLGTSSSGQEVDQYRPDEHRLQ                    GAREGWNQGDESSSLYTNQSKHQFSSKLTEQYRRRLDGTEHDPGEANSVLLRRSARER                    TAQTFY</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
DNA = <dnaseqindica>6667..7339#6428..6489#5941..6156#5682..5766#4502..4659#4266..4386#3648..3810#3476..3561#3149..3231#2214..3075#198..625#gaaggggaggggaaaaaattggaagccctagattttggcgggttggctacggcgaggtgcgggggaggggtcggggtcgggatcggcgggcggatccggtgggtggaggaggttgggcggcgagatctatgcggtggggaggggaggggaggaggaggaggaggggagcggggtgagaggggaggaggaggtggtggatggcggaggcggcgggttcgtcgtcgtcgtcgtcggcgtcggcggtggtggtggctgtggtgattgcggtggtggtggtggtgtgggttgtggtgcggcggaaggtgaggcgcgccgcggcgcggagggaggaggtgctgcggctcacgcggctggcgcaggaggagtcggagatggcggaggtggagtgcgcgcgcgcctactactcggagctgttcccgagcgtcgtgcacgcgacggagatggtggatgaggcggcgtggggggcgccgccggccgtggttccggctcaggcggaggcagaggcggagatggaggcccgggcccagccgcagccgcagccgccggtgggtgccaagggggtctgcgcggtgtgcttccggccgacgacgttcaggtgcaagcagtgcaaggctgtcaagtactggtgagttgtctgaattctgaaaccctcttctgagtccccctttgcatttcgtgaaatttcaccgggtgaaaggggaatcggaaagagagttctgcgattggtagtgcggatttctgtatttcgtagtaatttcggtgttcaaccttgaggagggctagtggttccagaaagcctggaatttgcgtctagttttggtttgcgcataacatgaccatcttgaataactgattggcaagtgagtttggtatggataaccctctatttagtcttttctttgtgcccatttgttgcatttgaagaatctaatgtggacatatggcattgctaacagaaacacagttttgaaagacattagcctgtgaatcgctcatctgtcatattcccaactaggatcctaatggctcaattctttctattacttttgttgatgatgatcttcttggaaactttactttttttagcctgacttaaagttgtccgtccattggctcggggcacatatattattgtcttttatttatgaatgaacttaggcacatgaccgggtttaagatgttaggatctcaatgtctaaaatgttctctagatgagaaaagtatcattttcacaaagcaatattatttgttgtgatggaatttactggtatcgttttcatacatgatgcttcctatgctcagatgctctacatcgaggcaacaaacatagatgatttatcaaaccatgttcaataaatagttgagactctgaaattcatagttattttttgcgggaaaagattcataccttttttttttgcggggagggaaaagattcatactgcttaacagtggtgattcttcacaatatttgtttcatgcgcataagcttatctctaatcatatcctttaaatttcactaaattgcaaatgtttggacaaaattatcacaaaacaacatatttacgccataataaactgtagatttagcatagaatatatcccgatactacagattgaagccattttgttgcaaaaatataagatttaaccccaattttatcacaaaactatatatttttaagatgtacacacatcaatcatgctaatctgaagggtattcagaaaattaaattccataatttcagaaaattaaattccataattttcattgacaaatttcatcacctgctacacattcatgagtatatttatgtgttaacccatgattatggattaaacgaatctgaagttttcgaggttgatagtcgtaataagaatttagcaaactacttatggaaccgttgattacttgagtttatcagtagattttttatggattagtttagttaatcatcctaacaaagatcattattggattacaacaactatttttattctgagttttatcctttgattctaaactcataatacttaacattgaggcttaatttactggatatgatatcaacattgataccttttcaaactcttaagttattatctttgttacattgtatacattgaaaattctgagctatagtgtaatgttgtgcatggcattagaatgtgctacttgttcaacttcaatgataccttcattttttttgcagttccttcaaatgccagatagcccactggagacagggtcataaaaatgaatgccgcccaccaagcactgatgctaatcatgatgatgtggctgaactttctgttgcaaaggaaaggaaaattgagcagacaagtgcttctgaagaaaacatagctgaaaccaacacggcagccaccgtgaagaatttaaatgataaaacaaaagatatgccctcagaagtacttgcttcggtggaggttcctgatgatgaccattctgtcagtgcggtcaaactccctcaaagttcttcacaagtagcttctcttggcagtagaaagacagaatcaaatatgaaacctacaactcctgttgaaaatggttcttacacaaaggacttagatgaggcgttggtgtgtagatttcaaccttctccaccaaagattagtggctctggaagtcttatcaacaaagagtccttaattgattccaagaagcaccaggattgctctcaaactagtaacagcaaaaaatatgcagataacaacaatgctcaagctgctctacctgttgcagtagaacctaaaacttccaggactgctcttcatgtggaagttggacactccaagacaaaagctgctggctcagacaacattggtgtgtcaaaaatggtgccatctgttttgactgttgataaagtttctcctgttcccggtggacgttctgttacacctaattcatcaaaaagggctgataatattgctgaaaggaattctaaaccatcagagaaatcaatttcaacagcaaatagcctggcaacatctctgaaaaaaattgtcaggcagcaaacagcaccaaaagttgtgaggcattatccatcagagccagtaagcaaaactgaactgctgtgtttatagttagtaggagttttctatctgctaatagttttatttttttcagacacattttccatatgagcttttcattaagctctatgaaaaggttgaattgcaaccgtttggtcttcataaccttggcaataggtaagttttggattatttctggatagttggaacacatatatgtgtttcttttttgcttatctcattattttagcatttctctaagatttataacttagctctccccatccttttgtggctatcaggctacatatcacagcttgcatcgaattttatgataatttgtggtgtttatgcaggaattagcttagtacagtgttctgtgttcaccctgtttcaccttgttttttcctctctcttgcagttgctatgcaaatgctgttcttcagtgcttaatgtttacccgaccacttacatcatatcttttgggagggcttcattcaaaaaattgtaatgttctattactgtgtttattacatcattgtttcccataaagcatttctttgagtaattatttaatatatcatactctctaggttccaaaaaggaatggtgcttcatgtgtgaatttgaaaaactcgttggggagggcagacaaggcaagattgctttgtcaccaactgggatactctctcatttgcctgacattggaagtagctttggtcctggtaaacaagaagatgctcatgaattccttaggtaagttattttttttaattgacagtttccagtttaagaagttaagaattagtttagcagaagttaggaacatttatgtgcctcaacgaggaatgcactgggggataagagcgggggtatcatatcacatattcatgcagaaaattaaagttaataggcctacttgaatatttgagtggtagccggagtgcttattaggttctgtggtctgtggtctgcatgaagaatctaatgagcaatgacaacctttttccctatcatctggattcggagttttggtggtggtttgcatcagtataatgttgtaatcctggtagaaacaacctaaacatattattttgggtatgaattggcattgccaatgtccttgttttgaattagcttagttaattgtgctcaaccagttcttttcaacaatagtgtctgatggaaccgcactacctgatctgttgtaggtacgccattgatgctatgcaatctgtatgcatgaaggaagccaggaaaagcggcactcatcggttacacgaagaaacaacacttatgcaattaatatttgggggctatctgcgatctaaggttttcttcacagttcacagaacaagtttaaatttctgttgtttgtactcaattacctgagatcagctgtgtaatgaagccccactcctattgactgcttttttccttcttctagataagatgcacaagatgtgatgctacttccgagcaacatgagcgtattttggatcttactgttgaaatagatggcgacatcagttcactggaaggagcacttgagcgatttacatctacagaagtcttggatggagataataaatataaatgcagcaggtttattacttagttgacctctatctttctctgccagctcttgctgttccttttgtgctcatatgcgttcatacagtgcacatcttttttgccactttccaaaatcctcaaaatgcttgtcactgagaccgtagtaagttaaggacctctattatagtgttgttgtaatttcaaaacgaattataggcacctcagacctgtagcctaagttcgtattcactttctgggatttagggatcgattttttttcccatgtcactaatcaggatttaagaggggaatgtgtaatccttagtgaaagggaaaaataaaaataaaaggataggcatgcattattgtttgtgaaagttggccaagagaggccttacaaaattaattcgtatcataacataatcaggtagcatgaggataccagtctaatgtgtagagtgtatcacgcaaagaccacgtaaatactgatgttatttgtgagcaccatgctggtgagctttctacttgttgtgaaactgaatgtgcattacatgggaactctgaattgcagagtgtttattaatttacggcgaagtatgagtgaccaactgtggtggttaaccgtcacgatagacttattgaaacgctatcacatgtttgatttttgaactaccgtatccaagctttctacaacaacatgagtagtgccttcagatctggcaaattgttgagatggaaaattgatttcccagaaattgtcatgtatatccatgcaaaagttgcatatattttagtcttgaaaacgagatatcttctcgagggacttttgaaaaagaattggtggaacgctctgttgcttgttaaaattgctttgcttctgtgaaataataggaaggtggatgtcataagacgtgtcctgttaatctagttctataataaatgtatcgtgttagagctgtaataactacatatttaatcacttctgtgtaacttgactgcttttgtgcctagtccctaatgctgatactcctaactctactatgtaatgtcagatgcaaatcgcatgagcgcgctaaaaagaagctgacaatatcggaagcaccaaatgtcctgactattgcgctgaaaagatatcaggtatcatctacaataagacctttttttttgcttttcttataatagcaacactgaaggaacttgtttacttattcaagagttcattgtttcatttatcctagttttgaataagtccaacaagcattgaaattgtatttagtgtttgactaatacttttcttctgtatctatacagtctggaaagtttggaaagatcaacaaagccatcagatttccagagaccttgaacttgcagcgctatatgagcccaaaagctgatgacacttcccctgtttacagcctgtatgcagtggttgtccatcatgatattatgaatgccgccttttctggtcattatgtatgctatgtgaaggacacgcatgggaagtggtacaaaacagatgacagtcaggtaaacaagctctttcaccatgtttttgcctatacctgcccaatgttttatcactggtaaaacactatttagtaaagccgattatgttcattcctggatcttccggagccttgttttcctattttaagtaatgaataatctttagctatgagagtactacttactgaggataatctatgtgttagtgaaagcatactgaacagaatacgcgacttcaaaaggcactgcaccattgttttgttctaactggagggtaaattgctttgttcaggtcaaacctgtatctctggaaaatgtcatgtcgaagtgcgcatacatgctgctctatgcaaggtagattctcttgtttcattagagagaagatcctttttgttatttttctttttgccacttgtttcaaggagcggaaaaaagagaagttctcatgaatagcagacactggcaattacttgtctgtgcttgcctggatctttatcaggacatatataaatcctttgtcaaccatttcaggtgttcaccaagagctccaagctctgtaaggccagcgctgatggctcaagatccagcacgtgtaaagaaggacaaggcaagggtaaattcaggacggtggcatggaggaggtcccatacaccaaggtggtcagatgtacgcagatcacatgacagatgatttgccccatacatatgacgagtttggacatggaccatattcgccagcagaatctcctagtccaagtgagagttcatcaattttcaccagttccgacacagggtcacatagcaccgacagcagtgaaagcactagaaactctaccagtgaggatatggaacgcctcatatttggtgatcaagtttcatactttgatggctctatgttcggacatggggaaaacggccgtatgacttattcccgatcaaagtctagcttgggtaccagttcatcgggtcaagaggtggatcagtataggcctgacgagcacaggcttcagggtgccagggagggttggaatcagggcgatgaaagttcttccttgtatactaaccaaagtaaacatcaatttagtagtaagttaacagaacaatataggaggaggttagatgggactgagcatgatcctggagaagccaatagtgttttattgaggagatcggctagggaaaggacggcccaaacattttattgacatgtggagggtttgggttgtagaggtataataatgtaggatgtattattaccccactgcaatgaaaaaggaaaaaatggctcagtttgtag</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068586.1 RefSeq:Os08g0478500]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 13:07, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information