Difference between revisions of "Os08g0540300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0540300| Description = Zinc finger, RING-type domain containing protein| Version = NM_001068917.1 GI:115477572 GeneID:4346186| Length = 758...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os08g0540300|
 
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Description = Zinc finger, RING-type domain containing protein|
 
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Version = NM_001068917.1 GI:115477572 GeneID:4346186|
 
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Length = 7588 bp|
 
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Definition = Oryza sativa Japonica Group Os08g0540300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
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Please input expression information here.
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AP = Chromosome 8:27135374..27142961|
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CDS = 27135540..27135770,27136865..27136986,27137537..27137639,27137777..27137867,27138098..27138270<br>,27138420..27138521,27138626..27138714,27139459..27139566,27139655..27139745<br>,27139955..27140044,27140658..27140705,27140834..27140905,27141003..27141096<br>,27141187..27141334,27142208..27142469|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008401:27135374..27142961
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source=RiceChromosome08
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008401:27135374..27142961
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source=RiceChromosome08
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggactccgacgccgagatgcccatgtccagcgacgaagagatgttggatgacgaggactattacgactacagtgatgacatgggtgaggacgatgatgggagcggcggcgggggcgggggagatagcgatggggaggaggaggaggagggggatgaggagctggtgggcggcgactacgagggccgcgaggcggaggggagcgacgaggtggtgtcccgccgcgagcagagatacattgtattaactgaaaaggatataaatgagcgtcaagaggaagatataggcaaggtatctgctgtactatcgattcgaagggaggaggcgtgtgttcttcttcatcactacaaatggaacatcagcaagttaagcgatgaatggtttgcggatgaagaaaaagttcgtgatattgttggattacttttaaatggaattgatcttcctaactctagaaagctaacttgtggaatatgttttgaagggtattcttctgatgtgatgagttctgctgattgtgatcatttttattgccatgaatgctgggaaggttatattagtgctgcaataagtgatggtccaggatgtttgtcattgcgatgccctgatccatcttgtggtgctatggttcttcagaacatgattaataagttagctaaagatgatgataaagtgagatatgcacgatttatcttacgtgcatatgttgaagatagcaagaagactaaatggtgtccagctcctgactgtacatgtgcagtggaatttgtcagcgatgggaactatgatgtctcatgcaattgcaaattcagtttttgttggaactgcacggaggaagctcatcgaccagtgaactgtgagactgtttctaggtggatattaaagaatagcgcagaatctgaaaatatgaactggatactggctaattctaagccgtgcccaaaatgcaaacgaccaatagagaaaaaccagggatgcatgcatatgacttgcactccaccttgcaaatttgagttctgctggttatgtctgggttcatgggctgaacatggggagagaactggtggattttacgcttgtaatcgctatgaatcagcaaagaaggagggagtttatgatgagactgaagcaaggagggaaagagccaaaaattcacttgagagatacatgcattactatgagcgctgggcatctaatcagacgtcgaggcagaaggcacaagcagatctgcaaaaggcagaaaaggaacaacttgcaaaattaacagatgtttttggaataccggagacccaactgaagttcataattgaagcttggtcacagattattgaatgcaggcgggtactcaaatggacatatgcttatggctattatctggacgacaaggtcaagagcgaatttttcgagtacctgcaaggtgaagctgagtctggtctggagcgtcttcaccaatgtgctgagaaagacctgcaatcatttttgactgtgagatctgataatactgaacctgcaccatcaattgctgaattcggtgacttccgggtgaagcttgcggggctgacaagtgtgactcggaattattttgagaaccttgttcaagcactggaggctggcttggaggatgtacactctactgcccagggtaccacatcaagcaatgccaccaacatcccctccaagaaagcagtcactaaaggcaaaacaaagaagcagcttcctagaacatcttcggacaactcagatgaaggctggccttgtgagcgctgcacgtttattaacccttcatcggtggatgcatgcagcgtctgcgataagcatagatactag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MDSDAEMPMSSDEEMLDDEDYYDYSDDMGEDDDGSGGGGGGDSD                    GEEEEEGDEELVGGDYEGREAEGSDEVVSRREQRYIVLTEKDINERQEEDIGKVSAVL                    SIRREEACVLLHHYKWNISKLSDEWFADEEKVRDIVGLLLNGIDLPNSRKLTCGICFE                    GYSSDVMSSADCDHFYCHECWEGYISAAISDGPGCLSLRCPDPSCGAMVLQNMINKLA                    KDDDKVRYARFILRAYVEDSKKTKWCPAPDCTCAVEFVSDGNYDVSCNCKFSFCWNCT                    EEAHRPVNCETVSRWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPC                    KFEFCWLCLGSWAEHGERTGGFYACNRYESAKKEGVYDETEARRERAKNSLERYMHYY                    ERWASNQTSRQKAQADLQKAEKEQLAKLTDVFGIPETQLKFIIEAWSQIIECRRVLKW                    TYAYGYYLDDKVKSEFFEYLQGEAESGLERLHQCAEKDLQSFLTVRSDNTEPAPSIAE                    FGDFRVKLAGLTSVTRNYFENLVQALEAGLEDVHSTAQGTTSSNATNIPSKKAVTKGK                    TKKQLPRTSSDNSDEGWPCERCTFINPSSVDACSVCDKHRY</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
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DNA = <dnaseqindica>167..397#1492..1613#2164..2266#2404..2494#2725..2897#3047..3148#3253..3341#4086..4193#4282..4372#4582..4671#5285..5332#5461..5532#5630..5723#5814..5961#6835..7096#cactggtatataaaaaacaccccatcctgtgtgcctgccgactcgcccacgcaactccgactctttccttccccaattctcccgtccaccggccgcggacctcgccggaaccctagccccgccgcccccctcccctccccgatcgcccgattcggtggtcggggtgatggactccgacgccgagatgcccatgtccagcgacgaagagatgttggatgacgaggactattacgactacagtgatgacatgggtgaggacgatgatgggagcggcggcgggggcgggggagatagcgatggggaggaggaggaggagggggatgaggagctggtgggcggcgactacgagggccgcgaggcggaggggagcgacgaggtggtgtcccgccgcgagcaggtgaggatttttttggtcggaagcagatcaggtggtggactggtggtggtgtttttttttcttttttcttttttttagcaggaagcgcgacggtcgatttcattaagattttgggaaaaaaaagttttcatacaactcgagattacaccccccttcggtgtagcttagcggggaggcaaggcgagctgaacgtagatcaggacctggaagatcaggggtgctagattggtagcgtcgaacggtctcgagaatggcgtcgttttgctgaaataaggattaggatgagcttatggcgtccttttcttttttttttctttttttctgaaatgaggatcgggatgagcttttgcggcagttcttaattttgatgtaccagtcagctaacgcgactgaaatatgttgataagattgatggtccagggtgcttgtcatgtactcggatgtgtagtagttgtttgtgattcacatctgctctttgggaaattaaggaatgttctgcttccgcacctagatgtgatctatcttccgctgttaggacagccttgggtgttttatacctgttcgcattgtgcgcaagccgacaagttgatgattacattagtgctaagatgcttagattgttatctgctcaatcaatattgatgctatacatggtgaatattgattagtgagcacaggtttacgcttaaggaataacatggtagagagtttagtctttgtaatggaactcatggatcggtgatgatgtactgctttcctgggttttgtttgtgctgatccaagcaaggttcacacctgggcatcaacagacgtagccaaatcatgatctatgttaaccattatatgcttgataatgtgttgctagtttgatagcttaaatacaaaggttaaaaggcggataattaatcgcatgcatcacgatgaaataccatatgtttctagagagctttctgtgctttctttccataatttccaagctggtactgtgtttggttgttttcgttcatgttgattggcacttctatgtcatcttgtttcactggatatccttgagtgtctctaaaaactggcccatgtttggtaactatggacagagatacattgtattaactgaaaaggatataaatgagcgtcaagaggaagatataggcaaggtatctgctgtactatcgattcgaagggaggaggcgtgtgttcttcttcatcactacaaatggtaagtttgttaaccgtcattcattgaatattcttttatcattatactccctccgtcccataatataagagattttgggtggatgtgacatatcctagtacttcgaatctggacaggtttcttaaccagattcatagtactaggatatatcacatccacccaaaatcccttatattttgggatggagggagtaagagtttactgaaatgagattgtacatatgtaatacatggtgtagtgagctatccaagtttcccttgatgcacatgcagtttgtttttactctgttacacttttcaaggtgctgtctgcaagcttccctttgataatttcttgaaaattatcactgtgaagtcttaggtagtacctccagattttgtatatgctggcaatttagtttacgtgtcattgctggtatgcaagtggtatgatgtgggattttctaactacttgacgattggaataagctgatcttccacttttggaatctagaaataagggtacaggtttgtatttgttctttgttaatctttatgagttctctgttcaggaacatcagcaagttaagcgatgaatggtttgcggatgaagaaaaagttcgtgatattgttggattacttttaaatggaattgatcttcctaactctagaaaggtttgtattatttattcaaatgccagtatattgttatcacttgtttgttgtgctggccacatgtcatatctgatcaaacctttggctgtggctacatatacactgtttcttacatctgacagctgttttggttgcagctaacttgtggaatatgttttgaagggtattcttctgatgtgatgagttctgctgattgtgatcatttttattgccatgaatgctgggaaggtctctctctctctctctctctctgtgcatgcttttgtgcataacttcctttttgcaattccaacactagcttagatagtttcaccatcagtgctcatgtatagactatcttgtagacttgtagttgttgtttttggtaaacatgatcaagatctgttcctgtgttgcagttattttatttttccctcagaataatgaaaatttatgataatataaattcaacctttcaggttatattagtgctgcaataagtgatggtccaggatgtttgtcattgcgatgccctgatccatcttgtggtgctatggttcttcagaacatgattaataagttagctaaagatgatgataaagtgagatatgcacgatttatcttacgtgcatatgttgaagatagcaagaaggtaatatgtttgaacaagctaactaattactccacttgatagttctttgtggagtacctattttttattgtttatttttctaacgatttgaaatgatgagctgtgctctttctgttaaccttttgtataacctatggcatttcctgcagactaaatggtgtccagctcctgactgtacatgtgcagtggaatttgtcagcgatgggaactatgatgtctcatgcaattgcaaattcagtttttgttggaacgttagtatttctggctccattttcctgacgatttaattctacttttttttattgctagtgatgaaaagtgtggagcttcatcaatgctttggtgatgtttgcagtgcacggaggaagctcatcgaccagtgaactgtgagactgtttctaggtggatattaaagaatagcgcagaatctgaaaatatgaactggtatggttcaggctcaaaactttattaagccatagtgtacggatagtgtatagataaggaattcattaatttttgtggagataaatctatgttcaaacatttgtgttgtatatttacttctttttttaacctatccttgatgccaatattgcagctatcttctaactttcctcatggttatgagtaaaaactgaggtggtgaaaaaaattgtgcatttaatttacgtacgtatattcagatgttatgtattcagaaacatcaaactttgtggacatcctcatgtgtgactggtggtctggaagcagaagatttgaggatgcaaggaactgtgaacactattaactctttgctgagtcagggctgcaagggctgatgcattgttttttaacaatatattatgacggaaaacatgtattatatgtggcactgtggcttaaacctcataataaacacctcttaatttatgttaaatacttggcattgactccatttttatcaattgatgacttctttttatggaaaaacttgtggaggctctagtgagaacattatgctgctcaagcgtttttgccatgtttacattacaggaatgtttgcctattatacaatgctgttagaattgtataccaatcttcagttcatggctagtccatgaatgctcaaatgtatttaaggtctttatgttgcttgaaatcatctaatcatgtcagatggtttatcatgttgttgatgatccttttcaggatactggctaattctaagccgtgcccaaaatgcaaacgaccaatagagaaaaaccagggatgcatgcatatgacttgcactccaccttgcaaatttgagttctgctggtatagtccaatgtctatgcttgctgaaatatttatgtccatattactagtgtatgtacctctcatttgttttctttgaacatttcaggttatgtctgggttcatgggctgaacatggggagagaactggtggattttacgcttgtaatcgctatgaatcagcaaagaaggagggagttgtatgttttatcttgagactatccaattgcatttagtagaaggaatcagtttctagatgtcttgtgtattttgttattgcttctgtagaattaaatgtttcaatcccacaagtcaatgtcgagtccaaattgacagtttgttcaattagttcattcattcatagaatcataagggttactttttcctaacttaattacctctaatgcagtatgatgagactgaagcaaggagggaaagagccaaaaattcacttgagagatacatgcattactatgagcgctgggcatctaatcagacggtatgttcaacatgctcaagtttgatgtctctttgagtttttttttctttctacaacaactatacgtgcagctttagtcattcttgtgctcataacttactctgtgtttttgaaccttctggtttacttggcaagtgttgtgttggccatatgcttgggcagatactaattttgacttaaattcttacctaccgagtgtagcccaactagctgcagctttatttgaagattacttgccaagtttatctcttactccctccgtcctagaatgtagcaacctaggataggatgagacccatcctaggacaacgaatttggacattcctcatgtccagattcgttgttctaagatgggtcatcctatcaacattatgggatgaaggtagtaagtgctaataaatgctcttttttaatttttatgttgtattaccttatcagttcatgatataaaaaaatacagttccagatgtttttctatacctgatgggtatatagtttctaatctactgtacatgcttgggatgaatgttctgcattgttctattctgaacttggaattttttctgctgtagtatgcaagtttctgtactgacatattcacttatattgccagtcgaggcagaaggcacaagcagatctgcaaaaggcagaaaaggaacaagtaagcattcgcatcatgttaggttgggggcgttgcatttagggcaagacataattgtttatcttcgccattcattcgtattttatatttgatagctgctaactctatttcttctctatgtgctacagcttgcaaaattaacagatgtttttggaataccggagacccaactgaagttcataattgaagcttggtcacaggtttgatatcataaatatgtcatgacccaaatgacactccatactatacaattcacctgcgtctgatgcatgcaccattccactatgtctatttcagattattgaatgcaggcgggtactcaaatggacatatgcttatggctattatctggacgacaaggtcaagagcgaatttttcgagtacctgcaaggtagttgtttgttgcattccaaaataaaatcctaagttctaccacgtgcttgccaaaaatcatgtggtatgtatattatatcttttataggtgaagctgagtctggtctggagcgtcttcaccaatgtgctgagaaagacctgcaatcatttttgactgtgagatctgataatactgaacctgcaccatcaattgctgaattcggtgacttccgggtgaagcttgcggggctgacaaggtatttcacagttattgtttttcctatatccttttgggtttggccatattcaactactgcatgctttaagatagttactcttgtttcaattagtactagtttttaggatgaacccaagggtttgcttttcttcatccttgaacgttttttttttttgccgggtcggccgaaaggttcggtcgaccaaatttcattaaggaaaaggggaacaaattacaaatgggctttatatcgacagtaggatgtcgagattagggtggggacaggtcccccaaacaatcgaagccatacagaaaaggctgaaggctacaataaaaatttgatgtcttacacaatatgaaaataacctccagacgtccacaccgaaacttcttctttgatgtcttccaataaccgctccacggtgtgttgcttgtgctgaaagattttggcgttgcgctccttccaaattatccttgaacgttcttacattgttcttaacaatccttgggtaggttcacatgaatgtaactaattatgccataatttaaatgccatttgagaattttagaagcctgagattttataattctaataaaggacatgaactttgtttgtgcccacctttctcttggtaatgatttagtattaatccatcatgtaaagtagtcaaacagtcaaagaggtggacatttcagctatgctctttacttgttgaccctagacttgcttctttgattttggtagttgttgtcgcaaatgtttttacttgctagcattttacaaggtcttgagatgctgtctatgctcatggatagcagcttccttgcctattctttattgtcatatgagctttgtttacgatatgttgactttgcttcgtctccactgcagtgtgactcggaattattttgagaaccttgttcaagcactggaggctggcttggaggatgtacactctactgcccagggtaccacatcaagcaatgccaccaacatcccctccaagaaagcagtcactaaaggcaaaacaaagaagcagcttcctagaacatcttcggacaactcagatgaaggctggccttgtgagcgctgcacgtttattaacccttcatcggtggatgcatgcagcgtctgcgataagcatagatactagatgaaaaactggctgaaagccagtgccccccataaatctcgaagctgttgagaaggtgggtgcttactcaaagctcatgagaagattgttgattgtagttctgttcctaaattatgtggcgttgaagaagagcttccaatggcagcaatggcgtacatgtgtgagtgaaggtccctggttgtatctagattgcagcaacaatgcaggaccgactatggagcgaaggtggatggggtacaaacatgtggtagtcttttttttttttactttctagcctatattatgtacatattagttatggtctgtagttgtgttaatgtggtgggcaatgttctgtttttgtttaaatgacatgagatgatgtggtgggtaaagttccaccccctgtactgaccaacctgtgaagctggagaatggtagatgtagctcttatctattgagcggtcatgtaaattaccaaagctcgtcataatctatggttgataaatcatg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068917.1 RefSeq:Os08g0540300]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 8]]
 
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[[Category:Chromosome 8]]
 

Latest revision as of 13:11, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information