Difference between revisions of "BGIOSGA009245"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{IndicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Indica Group]][[Category:Indica Chromosome 2]]
GeneName = BGIOSGA009245|
 
Description = Starch synthase V|
 
Definition = Oryza sativa Indica Group BGIOSGA009245, complete gene.|
 
tag = OS02G0807100|
 
tid = BGIOSGA009245-TA|
 
pid = BGIOSGA009245-PA|
 
Length = 6790|
 
Source = Oryza sativa Indica Group
 
 
 
  ORGANISM  Oryza sativa Indica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Indica Chromosome 2|Chromosome 2]]|
 
AP = Chromosome 2:36561934..36568723|
 
CDS = 36561934..36562091,36562231..36562287,36562356..36562413,36562737..36562887,36563092..36563314<br>,36563616..36563750,36564079..36564183,36564355..36564450,36564837..36564966<br>,36565387..36565437,36565992..36566102,36566722..36566831,36566945..36567110<br>,36567195..36567275,36567362..36567430,36567554..36567667,36568149..36568210<br>,36568342..36568438,36568604..36568723|
 
GCID = <gbrowseImage1>
 
name=IndicaChromosome02:36561934..36568723
 
source=RiceIndica02
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=IndicaChromosome02:36561934..36568723
 
source=RiceIndica02
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>ATGGAGGCGCCGGGCCTCGTCGTCGGAGCGGCGCTGCGAGCACCGCCACCGCCACCTCCTCTCCCGCGCTCCACGCGTGGCGCTGCGGATCGCCTCCTCGTCTTCTCGCGGGAGCCTCGACCTCGACTCGCCCCTCTCACCCGGTGCTACTGTTCCAGGGAGGGGAAGGGCAATGCTCGCAGCAAACCCCATCGCGAGGGCTCCAATTCCGTTCGCGAGTGGTTAATTTTTGTGAGTTTGTCTAGGCTGAACGTGAAAGCAAACAATGACCAGAAAAGCGTTATCTGTTCTGATGGCTTCAATTTCACAGATATCCTACACCTTAATAAGCAGCGGCTTGTGGCCATGGAAGAGCTCAAGAAACTGCAGGATGAAAATAAATCGCTTCTGCAGGACATAGAAGTACTGGAAACAGAAAGGCAAGGTTTTTCCATAGAAATAGCAGAATCATCAAGGTTCTCTGAGTTGCTTCTGCGTATAGATACAATGACCATTTCTGGTATGGTTGGCATGACTGAAGCGTCTGATTTAAGAAAAAAAGTTATTGACAACCGATACATGATACATAGTGTCTTTTCTGATATTCATCATAAACAAGATACTGAACTACTTTCAGAATTGCGACTTTTTCTGCGTAAACCAGCAGAGAAACCTCTACACGTTGTGCACATCTGCAGTGAAATGGATCCAATAACATCACGTGGATCATTAGCAACCTATGTTACTGGATTATCTTCCGCACTTCAAAGAAAGGGTAACTTGGTGGAGGTCATACTGCCCAAGTATGCTGGCATAAATGAAGATGTAATTCATTGCCTGAGGAAAGCTGAAGCAGACTATGAATCTTATTATGGCGGTCGTTGGCATAAAAACAGAATATGGACAGGTATATCAAGTGGTGTTAGTCTTACACTCATAGAACCGGTGCAGCTATCATATTTTGATCGCGATATGTTACGTGGCTACCCTGATGACTTTGAGCGATTTTCCTATTTTTCACGTGCGTCATTGGATTATATTGTAAAATCCAGAAAGCAGCCAGATGTTTTGCATGTACATAACTGGGAAACTGCTATAGTGGGGCCGCTATTCTGGGATATATTTGCTCACCAGGGACTTGGGAACACTCGGATATTACTGACATGTCAAGACTTGACTTTGCAATGCCTAGAGGTTCCAAATATGCTGGAATTGTGCGGACTTGATCCTCATAAACTTCATCGACCTGATCGTCTGCAGGATAATAGCGAGACAAATCTTGTTAATGTTCTAAAGGGAGGTATTGTATACTCAAATAAAGTTTTGTTAATGTCCTCAACCCTCCCAAGAGATATGGCTATCCAAGGCTTAGGACATGGGTTGGAAGCAACATTAACTACACACAAGGAGAAGGTGTTGGTTGCTTCTCATGGATTGGATGGTGAACTTTGGGATCCATCCAAAGACATTTATCTTCCTCAGAGGTATTCTCCAAATGACATTGAAGGAAAATCATTTTGCAGAAAGGCACTTAAGCGACGCCTTGGACTCCACAGTGGTTCTTCTGTTGTTTTCGGGTGTATCTGCAATGGTGATTCGAATACTGATGGTCTTAGGGAAGCTGTTCGTGTTGCTCTGCATGGAGGTGCTCAGGTCATCTTCATGGAAAACAAAGGGCCTGTGATGAACTCAACTGTGCAGGCATTAAAGGAAGAACTGAAGGGAGACAGAGTAATGTTTGTTGAGATATACGATGAGGCCCTGGAACATTTGATATTTGCAGGTTCTGATATATTTCTGTGCTCTTCCTTTTACGACCCATCGCTACAAATAGCGATGAGGGCAATAAAATATGGATCTGCGCCAGTACAGATAAACTTTCCCAGTAATGGATCCAGGCAAACTGAGTGGCATGACTACCCCAGCACAGCCCTCTCTCAGTACATCATCTCAACATATGGGGATGTGTCCCTTTCTCAAGCTCTCGATGGCATTAAGAACAGCCCTTCCCAGTGGGATTGGCGTATTAAGGATGCGATGTCAAAAGTTTTATCATGGGATGCTGAGTGCTACGACCTACATTGGGAGGCTTATTCCGTTATTAGGAAGCTGTGA</cdnaseq>|
 
AA = <aaseq>MEAPGLVVGAALRAPPPPPPLPRSTRGAADRLLVFSREPRPRLAPLTRCYCSREGKGNARSKPHREGSNSVREWLIFVSLSRLNVKANNDQKSVICSDGFNFTDILHLNKQRLVAMEELKKLQDENKSLLQDIEVLETERQGFSIEIAESSRFSELLLRIDTMTISGMVGMTEASDLRKKVIDNRYMIHSVFSDIHHKQDTELLSELRLFLRKPAEKPLHVVHICSEMDPITSRGSLATYVTGLSSALQRKGNLVEVILPKYAGINEDVIHCLRKAEADYESYYGGRWHKNRIWTGISSGVSLTLIEPVQLSYFDRDMLRGYPDDFERFSYFSRASLDYIVKSRKQPDVLHVHNWETAIVGPLFWDIFAHQGLGNTRILLTCQDLTLQCLEVPNMLELCGLDPHKLHRPDRLQDNSETNLVNVLKGGIVYSNKVLLMSSTLPRDMAIQGLGHGLEATLTTHKEKVLVASHGLDGELWDPSKDIYLPQRYSPNDIEGKSFCRKALKRRLGLHSGSSVVFGCICNGDSNTDGLREAVRVALHGGAQVIFMENKGPVMNSTVQALKEELKGDRVMFVEIYDEALEHLIFAGSDIFLCSSFYDPSLQIAMRAIKYGSAPVQINFPSNGSRQTEWHDYPSTALSQYIISTYGDVSLSQALDGIKNSPSQWDWRIKDAMSKVLSWDAECYDLHWEAYSVIRKL</aaseq>|
 
DNA = <dnaseqindica>1..158#298..354#423..480#804..954#1159..1381#1683..1817#2146..2250#2422..2517#2904..3033#3454..3504#4059..4169#4789..4898#5012..5177#5262..5342#5429..5497#5621..5734#6216..6277#6409..6505#6671..6790#ATGGAGGCGCCGGGCCTCGTCGTCGGAGCGGCGCTGCGAGCACCGCCACCGCCACCTCCTCTCCCGCGCTCCACGCGTGGCGCTGCGGATCGCCTCCTCGTCTTCTCGCGGGAGCCTCGACCTCGACTCGCCCCTCTCACCCGGTGCTACTGTTCCAGGTACTTTGCTTGCTTGCGAAGTTGCGATTCCACTGCGCTGGCGCTCACACACCCGCGCGCACTCGTAACATGTGGATGTGGGTATTCGTCACCGTGGCTTTGTTTGGGCGTTTGATCCTCAAATCGGTGCGTATTCCAGGGAGGGGAAGGGCAATGCTCGCAGCAAACCCCATCGCGAGGGCTCCAATTCCGTTCGGTGTGTGCTCCGCCGCTCGTATTATCTCTAGATTTTTTTTTCAGTTTTATTTTCACTATTTGACGCAGCGAGTGGTTAATTTTTGTGAGTTTGTCTAGGCTGAACGTGAAAGCAAACAATGACCAGGTATGCATTAAAACTTCGAATCTGTAACACGTTTCCCCACATATTTTACCTCATGTACCTGGATTCTCTAATGGTTTAAGAGGATAATTAATGCATTTAGAGCTGATGTCGCAGGAAACATATTTAGCTGATGAACAACACGAAGGGGTTGACATCTGGGAGCTATTCAGCGAGGCTCAGAGAAGTGATAACTACTTTCTTTTTAAATCTGAGCTTACTATTGAACCACACCAGAGTAGTATCATTTGATATTTGGCGTGGCATGCTTATGGCACTTTTCAATTAGAGTGAACCATTTGCATCACTTTTTTGTTTGCTAAAAGAAAAGCGTTATCTGTTCTGATGGCTTCAATTTCACAGATATCCTACACCTTAATAAGCAGCGGCTTGTGGCCATGGAAGAGCTCAAGAAACTGCAGGATGAAAATAAATCGCTTCTGCAGGACATAGAAGTACTGGAAACAGAAAGGCAAGGTGCGGCGGTGATACCATCCTAATGCCAAGATGCTTTTGTGAATTAACTGTGAAGATAGAATGCGAGATGCGTAACATCGAGCAATTCAATCCTGTGTTTGATGTGATACTTTTATTTTCTCTTTATCATTGTTAGCTTAAGAGAATAAGAGGTAAACAACAGACCTAAAATTTGACGCTGCATTCTCCTTTTACATATTTCAGGTTTTTCCATAGAAATAGCAGAATCATCAAGGTTCTCTGAGTTGCTTCTGCGTATAGATACAATGACCATTTCTGGTATGGTTGGCATGACTGAAGCGTCTGATTTAAGAAAAAAAGTTATTGACAACCGATACATGATACATAGTGTCTTTTCTGATATTCATCATAAACAAGATACTGAACTACTTTCAGAATTGCGACTTTTTCTGCGTAAACCAGCAGAGTATGTACCACTACCTCATTACATCTCTCCTCCAGGTTCCAGCTTTACTGTTGCCATATTATATTCAAAGATCCTACTGCATTATACATACATCTTTCAACCTGAATAAGCATGAAAAATTGAAAATGCACTACAATTTTTTCGTATATATGTCTTCTGCTTATATTTTGTGCTGTATAATTCTACAACTGCATGTTTTCTATATGATGCACAAACTACCTGTTTAATCTGAGTTTCTGCCATCATAACTGCTACTTACAAATTTTGCATAGCTACGTTAATTCAAATTACTGTTTTGCAGGAAACCTCTACACGTTGTGCACATCTGCAGTGAAATGGATCCAATAACATCACGTGGATCATTAGCAACCTATGTTACTGGATTATCTTCCGCACTTCAAAGAAAGGGTAACTTGGTGGAGGTCATACTGCCCAAGTATGCAATTTCCTTGTGACAAGCAAGTGATCACCAGTGAACTAATAAATTTGTCCATTTTCAAATGTTTGCAATAATTCCAATTATATTTATAAATGGACTAGGCATAAAAATGTGAACAATTTCTTGTGGGTTTTCAGCAACGTAGAGCTATAATACATACTACAGTGATCATTATTCTAAAAAGAGAGATATTTTGTTTTTGATAAATTTGTTGGATTTGGGATTGAGCTTTGTATGTAGTCTGATTTTGTTTGTGCCACATTTATGCCTCAAGTAATGCAAGCAAAGCTATCATGTTAATTGCACTGTTATAACACCAAAACAGGTATGCTGGCATAAATGAAGATGTAATTCATTGCCTGAGGAAAGCTGAAGCAGACTATGAATCTTATTATGGCGGTCGTTGGCATAAAAACAGAATATGGACAGGGTAAATATATACTCAGTATAACAAAAATATCTTATTTTGTTGATTATCATCAAGACCTTATTTTTTAAAAGTAATTTCATAGAGAATTTATTGCTGTGTGTGATTTTGTATTTTTTAGAGCTTTAGTCATGTTTTCTGGTTTCTCCTCCTAATTTACCTTCTTTAGTGCAGTATATCAAGTGGTGTTAGTCTTACACTCATAGAACCGGTGCAGCTATCATATTTTGATCGCGATATGTTACGTGGCTACCCTGATGACTTTGAGCGGTATGTTGTATGCCATATGGTATCTGCTTTTGTTTTGATTCTATTTTGGATACCTGTTGATCATTAGCTCTAGCTTTTGTCAGAAGCTCAACTTGTGATATATTTGTGCCATGCTGTTTATCTGTTGTATGTGATGACATGTGCTTACTGCATGTTTTAGCACATGATCCTCCATTCCTCCTTTCAGTTGATTACCTGATTGTATCTATTAGACCCTTGCTTTGATACCTTGTTTGGTACATAACTATTCATGTGCTGTATTGAGCTAGAAACAACTGTATGGAATCGACAAAAGGGTTATATAGGCTTGAAACAAACTGATCGGTTATATAGACCATAACTAGCATATTTGACTACATTTAACATCGATGAATACATTGTTACAGATTTTCCTATTTTTCACGTGCGTCATTGGATTATATTGTAAAATCCAGAAAGCAGCCAGATGTTTTGCATGTACATAACTGGGAAACTGCTATAGTGGGGCCGCTATTCTGGGATATATTTGCTCACCAGGTCAGTCATGCTATCTCCCAAAGACATTGTTGTTTCAGTGTAAATGTTTATACTTCATACCTCACAAATTATTTCTTCTGTCCGATCTCGTGTTTCTTATTATATTTTTCACTGGTCTCCTAGTATTGCCAAGGGTTGATTAGTACTTCTCAAAGCAAAACAGGGAATGTATGCACACTGTTCTACAGACAGGAAATCGATGTGAACATTATTATTTTCTGCATACAGAAAAATAATACACCTTCATTCCCCCTGTTTATATTGAACATTGTTGCACAAAAGATTCTTCCCAGTCTTTAGAACGACGACTATAAAGTATTAGAAATGCAGTTGAATTTTTTATGTGCTGCAGAAAATCATCTGAGCATTTTGTTACTCCTCATGTGAAGTTTTTCCTTATAAGTTGTATTCAATTTTCAGGGACTTGGGAACACTCGGATATTACTGACATGTCAAGACTTGACTTTGCAAGTAAATATCATATATGCTTTATTTGAGTTGCTACTGGTTAACTGTATTTGATGTTCTTAATTAAACAGGCTGATCACAGTTGCTAAACATAATCTGTTCTAATATCAAATATCTGAAGAATAAAAAAATGAATCCTTCTGATGCAGTAAATCATATCTTCAAATTATCTGTCGATCTTTTTTGTTGGTGAAATTGTTTCATTATACCTTGAAATTGAGAAATAGAAGTACACAGCAAATGTTCACTGTAGGATACCAGTAACCATATGGGAAAGGAACCTATGCCTTCTCTGATATATCCTTTACTTTTCTGGCAATATCTATTAAGGACCTATCTGTTATAATTAGCAGAATTACCTAATTCATATTTTCAGTGAGTACCCTATTGGAATATGTATGCACCATTACCATCATAAGTTCATTCACTCTTTCAGGCATCGTGTTGCTCAAATTTTTACCAACAACACAGCGAAATTTGGATTGACTAGAGATTTTCGTCTTTCAAATATCTTTAAACTTTAATGGACATATTAACAAAAACAATCCTATATGCAGTGCCTAGAGGTTCCAAATATGCTGGAATTGTGCGGACTTGATCCTCATAAACTTCATCGACCTGATCGTCTGCAGGATAATAGCGAGACAAATCTTGTTAATGTTCTAAAGGTCAGCCTTCTTAAAATTTTAGGAGTTGATGCCATGGGTTGAGTACTGTGACATATGACAATTGAAGACTATGCTATTGTTTTTTTCTAAATTTCTTTCATCTTTATATTTAACCCTTCGTTCATGACACTTCCATCTTTCTATAAGAAACTAGTTCAAAGATGTGCTTGAAGAAGATATCAAAATGCTAGACAGAAGTAAATTGTTTCACACATAATCCTTTGAATGATAAGTATGTGAAGCTTAATTTTGAACAAGGCAAGCACCATGGCAACTGCAATCACTTGGCACTTGCATATTTGCAAGCTTTATTTCATGCAACCACATATTCAGACTGTGGTTCGTGTGTTGTGTGGAATTATCATGAGGAGAACTTTGCTTGGCTGACATGAACGACTTTGTTTGGCTTTATCAGAACCTTGAACAATATCAGTATTATTAATCTCAATTGACATGTGTTTTAAGTCCTCGACTCTTGATATCCCCAAGAAAACTTTGTATGAGCTTCAGGTCATCTTGTTTCAGGGATGCATTGTTTATTCAAATAGATATGAAAGTCCTTGACTCCTTGATATCCCCAAGTAAACTTTGTATGAGCTTCAGCTCATTTTGTTTTCAGGGAGGTATTGTATACTCAAATAAAGTTTTGTTAATGTCCTCAACCCTCCCAAGAGATATGGCTATCCAAGGCTTAGGACATGGGTTGGAAGCAACATTAACTACACACAAGTAATTATCACCTTGTTTTGCTTTTTATATTTTCCTCCCTGTAGCCTGTAGGGCTAATGAATGTCCATGACTGCAGTTTCTTGTTTCTCACACAAATTTTGTTTCCTCTCCAGGGAGAAGGTGTTGGTTGCTTCTCATGGATTGGATGGTGAACTTTGGGATCCATCCAAAGACATTTATCTTCCTCAGAGGTATTCTCCAAATGACATTGAAGGAAAATCATTTTGCAGAAAGGCACTTAAGCGACGCCTTGGACTCCACAGTGGTTCTTCTGTTGTTGTATGTACTTCTCATTGTCTTGCACAAAAAACATATTTTTGTTTAGCCATTACAGTGTTTCATGAAGTATATGTCGTTTGTCAGTTCGGGTGTATCTGCAATGGTGATTCGAATACTGATGGTCTTAGGGAAGCTGTTCGTGTTGCTCTGCATGGAGGTGCTCAGGTTTGTATTACTAATTATTAATTGAGGACCTTCACTTTGGACTCAGGCTCTCCACTAGCGCAGTTTTTAGAGTTTATACTGTGTAGGTCATCTTCATGGAAAACAAAGGGCCTGTGATGAACTCAACTGTGCAGGCATTAAAGGAAGAACTGAAGGTATCAGTATTACTGTTCCATGTCTATCATCAGTAACCTGTGTAAAGCTTTCTGTGTTCATGGAGACTGTAGAGTGTAGAGTAACATTACATCTCGGTTCACTTGTTTCAATTTATCAAACAGGGAGACAGAGTAATGTTTGTTGAGATATACGATGAGGCCCTGGAACATTTGATATTTGCAGGTTCTGATATATTTCTGTGCTCTTCCTTTTACGACCCATCGCTACAAATAGCGGTATGTAAATTTTTTTTCTATTTCCTGCTTCTGCTTAGTTAGCTAATGTTCACTTCGCAATGGCATCCAAAAACTTAGAAAAAGTCAGTATCACATGATTTAATGGAAGGAGGTATTCTCCAGTTTTTGGAGTATGATTTATTGGTAGATACTGAGTCAAGAGTGAAATCAGCTCCTTGACACATAACTGGCGCAACTTCATTTCCACAGACTGAAATGAAGCAATTGACAAGCTCTTTGACCAAAACTCCTTGCAGTTCAGATATAATTTTGTTCTTTGGTGACATTTTTATTTTGCATCTCCGCTTTAGCTGTGTACTTGTGTATGCATTGTTGATCTTAGCAACATCATAAGTTACCGGAATTATATTTTGATTTTTGACACATGAAAATGAAATTAATTGTGCAATGAAAGTTAGCTTACAAGTTACAAACTCACCACTTTGTCTCGTAGCAAGTTGACTCTTATCTTTGTGGGCAGATGAGGGCAATAAAATATGGATCTGCGCCAGTACAGATAAACTTTCCCAGTAATGGATCCAGGTGAAAACTGCAAAATATTTTATAGATGTTTGATATGCCAATTGACAATTATGTGTTGTCAAGTTTACTAAGAAGTGGCAAATATGTGTTTATGTGTACTTATGGCTCTGTTTAAATTTACTTGTAACCAGGCAAACTGAGTGGCATGACTACCCCAGCACAGCCCTCTCTCAGTACATCATCTCAACATATGGGGATGTGTCCCTTTCTCAAGCTCTCGATGGCATTGTAAGTTCACAATCTCTAGGACACTACTTAGTTACTTAACACTTATCCTTTGGAAGCTGTTGAATCATTAGGACATGCCAAATCTGCAAGAAAGAAGGCTTATAGGAAGCTAAAACAGCCTCCCCGAATAAGCTATATCAAATTCTTTGCTTCTTGAATGTGCAGAAGAACAGCCCTTCCCAGTGGGATTGGCGTATTAAGGATGCGATGTCAAAAGTTTTATCATGGGATGCTGAGTGCTACGACCTACATTGGGAGGCTTATTCCGTTATTAGGAAGCTGTGA</dnaseqindica>|
 
Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA009245 EnsemblPlants:BGIOSGA009245]|
 
}}
 
[[Category:Genes]]
 
[[Category:Indica mRNA]]
 
[[Category:Oryza Sativa Indica Group]]
 
[[Category:Indica Genes]]
 
[[Category:Indica Chromosome 2]]
 
[[Category:Chromosome 2]]
 

Latest revision as of 07:40, 12 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information