Difference between revisions of "Os07g0207700"
(Created page with "{{JaponicaGene|
GeneName = Os07g0207700|
Description = Conserved hypothetical protein|
Version = NM_001065694.1 GI:115471120 GeneID:4342696|
Length = 5129 bp|
Definition ...") |
(→Mutation) |
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| − | + | The rice gene Os07g0207700 was reported as '''''sh-h''''' in 2010<ref name="ref1" /> by researchers from Korea and USA. | |
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| − | + | ==Annotated Information== | |
| − | + | ===Gene Symbol=== | |
| − | + | *'''''Os07g0207700 <=> sh-h, OsCPL1 | |
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| − | + | ===Function=== | |
| − | + | * '''''sh-h''''' encodes a protein containing a conserved carboxy-terminal domain (CTD) phosphatase domain, was named Oryza sativa CTD phosphataselike 1 (OsCPL1). | |
| − | + | * OsCPL1 represses differentiation of the abscission layer during panicle development. | |
| − | + | ===Mutation=== | |
| − | + | [[File:Os07g0207700-1.png|right|thumb|400px|'''Figure 1. Shattering degree and anatomy of the abscission layer region.''' '' <ref name="ref1" />.'']] | |
| − | + | * Compared with the wild-type Hwacheong line, the shattering mutant line, Hsh, has a well-developed abscission layer and a drastically reduced grain pedicel BTS (Figure 1a,b). | |
| − | + | * RNA interference (RNAi) transgenic lines with suppressed expression of '''''sh-h''''' exhibited greater seed shattering. | |
| − | + | ||
| − | + | ===Expression === | |
| − | + | * The expression of '''''sh-h''''' was detected in the leaves and roots at all growth stages, and in young panicles of various lengths from both wild and mutant lines | |
| − | + | ||
| − | + | ===Evolution=== | |
| − | + | ===Sublocalization=== | |
| − | < | + | * Subcellular localization and biochemical analysis revealed that the OsCPL1 protein is a nuclear phosphatase, a common characteristic of metazoan CTD phosphatases involved in cell differentiation. |
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| − | + | You can also add sub-section(s) at will. | |
| − | + | ==Labs working on this gene== | |
| − | + | *Department of Agricultural Bio-resources, National Academy of Agricultural Science (NAAS), Suwon 441-707, Korea, | |
| − | + | *National Research Laboratory of Plant Functional Genomics, Division of Molecular and Life Science, Pohang University of Science and Technology (POSTECH), Pohang 790-784, Korea, | |
| − | [[Category:Genes]] | + | *National Institute of Crop Science, Suwon 441-857, Korea, |
| − | + | *Department of Agronomy, Kyungpook National University, Daegu 702-701, Korea, | |
| − | [[Category:Oryza Sativa Japonica Group]] | + | *School of Environment and Agriculture, Sunchon National University, Sunchon 540-742, Korea, |
| − | [[Category:Japonica | + | *Department of Plant Science, Research Institute of Agriculture and Life Sciences, and Plant Genomics and Breeding Institute, |
| − | + | Seoul National University, Seoul 151-921, Korea, | |
| − | + | *National Agrobiodiversity Center, National Academy of Agricultural Science (NAAS), Suwon 441-707, Korea | |
| + | *Department of Plant Breeding, Cornell University, Ithaca, NY 14853-1901, USA | ||
| + | ==References== | ||
| + | <references> | ||
| + | * <ref name="ref1"> | ||
| + | Ji H, Kim SR, Kim YH, Kim H, Eun MY, Jin ID, Cha YS, Yun DW, Ahn BO, Lee MC, | ||
| + | Lee GS, Yoon UH, Lee JS, Lee YH, Suh SC, Jiang W, Yang JI, Jin P, McCouch SR, An | ||
| + | G, Koh HJ. Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the | ||
| + | development of the abscission layer and seed shattering in rice. Plant J. 2010 | ||
| + | Jan;61(1):96-106. doi: 10.1111/j.1365-313X.2009.04039.x. PubMed PMID: 19807881. | ||
| + | |||
| + | </ref> | ||
| + | </references> | ||
| + | |||
| + | |||
| + | ==Structured Information== | ||
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] | ||
Latest revision as of 06:13, 11 December 2016
The rice gene Os07g0207700 was reported as sh-h in 2010[1] by researchers from Korea and USA.
Contents
Annotated Information
Gene Symbol
- Os07g0207700 <=> sh-h, OsCPL1
Function
- sh-h encodes a protein containing a conserved carboxy-terminal domain (CTD) phosphatase domain, was named Oryza sativa CTD phosphataselike 1 (OsCPL1).
- OsCPL1 represses differentiation of the abscission layer during panicle development.
Mutation
Figure 1. Shattering degree and anatomy of the abscission layer region. [1].
- Compared with the wild-type Hwacheong line, the shattering mutant line, Hsh, has a well-developed abscission layer and a drastically reduced grain pedicel BTS (Figure 1a,b).
- RNA interference (RNAi) transgenic lines with suppressed expression of sh-h exhibited greater seed shattering.
Expression
- The expression of sh-h was detected in the leaves and roots at all growth stages, and in young panicles of various lengths from both wild and mutant lines
Evolution
Sublocalization
- Subcellular localization and biochemical analysis revealed that the OsCPL1 protein is a nuclear phosphatase, a common characteristic of metazoan CTD phosphatases involved in cell differentiation.
You can also add sub-section(s) at will.
Labs working on this gene
- Department of Agricultural Bio-resources, National Academy of Agricultural Science (NAAS), Suwon 441-707, Korea,
- National Research Laboratory of Plant Functional Genomics, Division of Molecular and Life Science, Pohang University of Science and Technology (POSTECH), Pohang 790-784, Korea,
- National Institute of Crop Science, Suwon 441-857, Korea,
- Department of Agronomy, Kyungpook National University, Daegu 702-701, Korea,
- School of Environment and Agriculture, Sunchon National University, Sunchon 540-742, Korea,
- Department of Plant Science, Research Institute of Agriculture and Life Sciences, and Plant Genomics and Breeding Institute,
Seoul National University, Seoul 151-921, Korea,
- National Agrobiodiversity Center, National Academy of Agricultural Science (NAAS), Suwon 441-707, Korea
- Department of Plant Breeding, Cornell University, Ithaca, NY 14853-1901, USA
References
- ↑ 1.0 1.1 Ji H, Kim SR, Kim YH, Kim H, Eun MY, Jin ID, Cha YS, Yun DW, Ahn BO, Lee MC, Lee GS, Yoon UH, Lee JS, Lee YH, Suh SC, Jiang W, Yang JI, Jin P, McCouch SR, An G, Koh HJ. Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice. Plant J. 2010 Jan;61(1):96-106. doi: 10.1111/j.1365-313X.2009.04039.x. PubMed PMID: 19807881.
