Difference between revisions of "Os09g0457900"

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(Created page with "{{JaponicaGene| GeneName = Os09g0457900| Description = Similar to AP2 domain containing protein RAP2.6 (Fragment)| Version = NM_001069906.1 GI:115479554 GeneID:4347266| Le...")
 
(→‎Labs working on this gene)
 
(45 intermediate revisions by 4 users not shown)
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{{JaponicaGene|
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The rice '''''Os09g0457900''''' was reported as '''''OsEATB''''' in 2011 <ref name="ref1" /> by researchers from China.  <ref name="ref1" />
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GeneName = Os09g0457900|
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Description = Similar to AP2 domain containing protein RAP2.6 (Fragment)|
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==Annotated Information==
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Version = NM_001069906.1 GI:115479554 GeneID:4347266|
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[[File:76HF6.jpg|right|thumb|527px|'''Figure 6.''' ''Effect of transgenic OsEATB on rice yield traits.<ref name="ref1" />.'']]
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Length = 1100 bp|
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===Gene Symbol===
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Definition = Oryza sativa Japonica Group Os09g0457900, complete gene.|
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*'''''Os09g0457900''''' '''''<=>''''' '''''OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB'''''
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Source = Oryza sativa Japonica Group
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 +
===Function===
 +
* Plant height is a decisive factor in plant architecture. Rice (Oryza sativa) plants have the potential for rapid internodal elongation, which determines plant height. A large body of physiological research has shown that ethylene and gibberellin are involved in this process.
 +
* The APETALA2 (AP2)/Ethylene-Responsive Element Binding Factor (ERF) family of transcriptional factors is only present in the plant kingdom.
 +
* '''''OsEATB''''' reduces rice plant height and panicle length at maturity, promoting the branching potential of both tillers and spikelets.
 +
* '''''OsEATB''''' Is a Novel Rice AP2/ERF
 +
* '''''OsEATB'''''  Negatively Regulates Ethylene-Induced Enhancement of GA Responsiveness by Reducing GA Biosynthesis
 +
* '''''OsEATB''''' Regulates Rice Yield Components through the Promotion of Tillering and Panicle Branching
 +
 
 +
===Phenotypic analysis===
 +
* Overexpression of '''''OsEATB''''' Decreases the Endogenous GA Level in Rice
 +
 
 +
===Expression===
 +
* OsEATB Expression Is Negatively Regulated by Ethylene, ABA, and Abiotic Stress in Rice
 +
* Ectopic expression of OsEATB showed that the cross talk between ethylene and gibberellin, which is mediated by OsEATB, might underlie differences in rice internode elongation.
 +
* Analyses of gene expression demonstrated that OsEATB restricts ethylene-induced enhancement of gibberellin responsiveness during the internode elongation process by down-regulating the gibberellin biosynthetic gene, ent-kaurene synthase A.
 +
 
 +
==Labs working on this gene==
 +
* State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Sciences, Fudan University,Shanghai 200433, China.
 +
* Key Laboratory of Analytical Chemistry for Biology and Medicine, Department of Chemistry, Wuhan University, Wuhan 430072, China.
 +
 
 +
==References==
 +
<references>
 +
<ref name="ref1">Weiwei Qi, Fan Sun, Qianjie Wang, Mingluan Chen, Yunqing Huang, Yu-Qi Feng,
 +
Xiaojin Luo, and Jinshui Yang(2011) Rice Ethylene-Response AP2/ERF Factor OsEATB
 +
Restricts Internode Elongation by Down-Regulating
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a Gibberellin Biosynthetic Gene. Plant Physiol 157:216-228.</ref>
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</references>
 +
 
 +
==Structured Information==
  
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
 
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AP = Chromosome 9:17959811..17960910|
 
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CDS = 17959874..17960698|
 
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GCID = <gbrowseImage1>
 
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name=NC_008402:17959811..17960910
 
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source=RiceChromosome09
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008402:17959811..17960910
 
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source=RiceChromosome09
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atgaccaagaaggtgataccggccatggcggcggcgaggcaggattcttgcaagaccaagcttgatgagcgtgggggtagtcatcaggctccgagctccgcgcggtggatctcgtccgagcaggagcacagcatcatcgtcgcggctctgcggtacgtggtgtccgggtgcaccacgccgccgccggagatcgtcacggtggcgtgcggggaggcgtgtgctctgtgcggcatcgacggctgtctcgggtgcgacttctttggggccgaggcggcggggaacgaggaggcggtaatggcgacggattatgctgctgctgctgctgcggccgcggtggcaggaggatcaggcgggaagagggttaggcggaggaggaagaagaacgtgtaccgcggcgtgcggcatcggccgtgggggaagtgggcagcggagatacgcgacccgcgccgcgcggtgcgcaagtggctcgggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgccctcgagttccgcggcgcgcgcgcgaagctcaacttcccgtgctccgagcctttgcccatgcccagccaaagaaacggcaatggcggcgatgctgtcacggcggcgacgacaacggcagagcagatgactccgactctgtcgccgtgcagcgcggatgccgaggagacgacgacgccggtggattggcagatgggcgcggacgaagccggcagcaaccagctctgggatggcttgcaggacctgatgaagctggatgaagcggacacctggttcccgccattttccggtgcagcgtctagtttttga</cdnaseq>|
 
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AA = <aaseq>MTKKVIPAMAAARQDSCKTKLDERGGSHQAPSSARWISSEQEHS                    IIVAALRYVVSGCTTPPPEIVTVACGEACALCGIDGCLGCDFFGAEAAGNEEAVMATD                    YAAAAAAAAVAGGSGGKRVRRRRKKNVYRGVRHRPWGKWAAEIRDPRRAVRKWLGTFD                    TAEEAARAYDRAALEFRGARAKLNFPCSEPLPMPSQRNGNGGDAVTAATTTAEQMTPT                    LSPCSADAEETTTPVDWQMGADEAGSNQLWDGLQDLMKLDEADTWFPPFSGAASSF</aaseq>|
 
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DNA = <dnaseqindica>64..888#aacgacctcaagcacactactagctccggctcacttagctccctactgatcactggaacactcatgaccaagaaggtgataccggccatggcggcggcgaggcaggattcttgcaagaccaagcttgatgagcgtgggggtagtcatcaggctccgagctccgcgcggtggatctcgtccgagcaggagcacagcatcatcgtcgcggctctgcggtacgtggtgtccgggtgcaccacgccgccgccggagatcgtcacggtggcgtgcggggaggcgtgtgctctgtgcggcatcgacggctgtctcgggtgcgacttctttggggccgaggcggcggggaacgaggaggcggtaatggcgacggattatgctgctgctgctgctgcggccgcggtggcaggaggatcaggcgggaagagggttaggcggaggaggaagaagaacgtgtaccgcggcgtgcggcatcggccgtgggggaagtgggcagcggagatacgcgacccgcgccgcgcggtgcgcaagtggctcgggacgttcgacaccgccgaggaggccgccagggcgtacgaccgcgccgccctcgagttccgcggcgcgcgcgcgaagctcaacttcccgtgctccgagcctttgcccatgcccagccaaagaaacggcaatggcggcgatgctgtcacggcggcgacgacaacggcagagcagatgactccgactctgtcgccgtgcagcgcggatgccgaggagacgacgacgccggtggattggcagatgggcgcggacgaagccggcagcaaccagctctgggatggcttgcaggacctgatgaagctggatgaagcggacacctggttcccgccattttccggtgcagcgtctagtttttgagctagtgttattagatctcaaccgttggattagattactggaaggccattcatttattcgtttcattgtatagctaattagctatacttcattgtttgtgcagagcacgttttttaggagtaccgtcttatacatatttttttgtacagagtagaaagtaacaagaattttgtatattgatggaatagattatttccaattaatatttgcgc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069906.1 RefSeq:Os09g0457900]|
 
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}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Latest revision as of 15:30, 7 March 2017

The rice Os09g0457900 was reported as OsEATB in 2011 [1] by researchers from China. [1]

Annotated Information

Figure 6. Effect of transgenic OsEATB on rice yield traits.[1].

Gene Symbol

  • Os09g0457900 <=> OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB

Function

  • Plant height is a decisive factor in plant architecture. Rice (Oryza sativa) plants have the potential for rapid internodal elongation, which determines plant height. A large body of physiological research has shown that ethylene and gibberellin are involved in this process.
  • The APETALA2 (AP2)/Ethylene-Responsive Element Binding Factor (ERF) family of transcriptional factors is only present in the plant kingdom.
  • OsEATB reduces rice plant height and panicle length at maturity, promoting the branching potential of both tillers and spikelets.
  • OsEATB Is a Novel Rice AP2/ERF
  • OsEATB Negatively Regulates Ethylene-Induced Enhancement of GA Responsiveness by Reducing GA Biosynthesis
  • OsEATB Regulates Rice Yield Components through the Promotion of Tillering and Panicle Branching

Phenotypic analysis

  • Overexpression of OsEATB Decreases the Endogenous GA Level in Rice

Expression

  • OsEATB Expression Is Negatively Regulated by Ethylene, ABA, and Abiotic Stress in Rice
  • Ectopic expression of OsEATB showed that the cross talk between ethylene and gibberellin, which is mediated by OsEATB, might underlie differences in rice internode elongation.
  • Analyses of gene expression demonstrated that OsEATB restricts ethylene-induced enhancement of gibberellin responsiveness during the internode elongation process by down-regulating the gibberellin biosynthetic gene, ent-kaurene synthase A.

Labs working on this gene

  • State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Sciences, Fudan University,Shanghai 200433, China.
  • Key Laboratory of Analytical Chemistry for Biology and Medicine, Department of Chemistry, Wuhan University, Wuhan 430072, China.

References

  1. ↑ 1.0 1.1 1.2 Weiwei Qi, Fan Sun, Qianjie Wang, Mingluan Chen, Yunqing Huang, Yu-Qi Feng, Xiaojin Luo, and Jinshui Yang(2011) Rice Ethylene-Response AP2/ERF Factor OsEATB Restricts Internode Elongation by Down-Regulating a Gibberellin Biosynthetic Gene. Plant Physiol 157:216-228.

Structured Information