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| − | {{JaponicaGene|
| + | The rice gene Os07g0490200 was reported as '''''OsCBT''''' in 2009<ref name="ref1" /> by researchers from Korea. |
| − | GeneName = Os07g0490200|
| |
| − | Description = Similar to Ankyrin repeat-rich membrane-spanning protein|
| |
| − | Version = NM_001066207.1 GI:115472146 GeneID:4343265|
| |
| − | Length = 12829 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os07g0490200, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Gene Symbol=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | *'''''Os07g0490200 <=> OsCBT, CBT |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Function=== |
| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
| + | * '''''OsCBT''''' gene, which encodes a calmodulin (CaM)-binding protein. |
| − | AP = Chromosome 7:18865438..18878266|
| + | * '''''OsCBT''''' might act as a negative regulator on plant defense. |
| − | CDS = 18865778..18865822,18866105..18866422,18866664..18867219,18867623..18868314,18868971..18869351<br>,18869896..18869978,18870054..18870149,18870355..18870523,18871235..18871280<br>,18872038..18872126,18872213..18872328,18877389..18877514,18878151..18878217<br>|
| + | ===Mutation=== |
| − | GCID = <gbrowseImage1>
| + | * The '''''oscbt-1''''' mutant exhibits reduced levels of '''''OsCBT''''' transcripts and no significant morphological changes compared to wild-type plant although the growth of the mutant is stunted. However, '''''oscbt-1''''' mutants showed significant resistance to two major rice pathogens. The growth of the rice blast fungus ''Magnaporthe grisea'', as well as the bacterial pathogen ''Xanthomonas oryzae pv. oryzae'' was significantly suppressed in '''''oscbt-1''''' plants. Histochemical analysis indicated that the hypersensitive-response was induced in the '''''oscbt-1''''' mutant in response to compatible strains of fungal pathogens. |
| − | name=NC_008400:18865438..18878266
| + | * The researchers also observed significant increase in the level of pathogenesis-related genes in the '''''oscbt-1''''' mutant even under pathogen-free condition. |
| − | source=RiceChromosome07
| + | ===Expression === |
| − | preset=GeneLocation
| + | * '''''OsCBT''''' expression was induced upon challenge with fungal elicitor. |
| − | </gbrowseImage1>| | + | |
| − | GSID = <gbrowseImage2>
| + | ===Evolution=== |
| − | name=NC_008400:18865438..18878266
| + | |
| − | source=RiceChromosome07
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage2>| | + | ==Labs working on this gene== |
| − | CDNA = <cdnaseq>atggcgggagcgggcggatgggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaactgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattggaaaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggtaacgaagaaagggttcatgtctattatgctcgaggtgaagatgatccaaatttctttcgaagatgctactggctacttgacaaagatttggagcgcatagttcttgtgcattatcggcaaacagctgaggaaaatgcaatggctcctccgaacccagaacctgaagttgcagatgttcctacagtgaatttgatccattacacctctcctctgacctctgcagattcaacctctggtcatactgagctatctttgccagaggaaattaattcacatggtggcatatcagcttctagtgagactggcaatcatgattccagcctggaggagttttgggctaatcttttagagtcatctataaaaaacgacccaaaagttgttacttctgcctgcggtggttcctttgtgtccagtcagcagattaataatgggccgaagaattctggaaacattgtcaataccagtatggcaagtaatgctatcccagcacttaatgtggtgtcagaaacttatgctacaaatcatggcctcaatcaagtaaatgcaaatcattttggagctctgaagcatcaaggagatcagactcaatctcttttggcgtctgatgtagattctcaatcagatcaatttataagttcttcggtgaaatctccaatggatggtaacacatctattcctaatgaggtgcctgctaggcagaacagtcttggactgtggaagtacttggatgatgacagtcctggtttaggagataatccaagttcagttccacagagcttctgtccagtgaccaatgaaagactattagaaatcaatgagatctccccagaatgggcttactctacagagactaccaaggtcgtggtgattgggaatttctatgagcaatacaagcatttggctgggtctgctatgtttggtgtctttggtgagcaatgtgttgccggagatattgttcaaactggtgtttaccgtttcatggttggaccacatacacctggaaaagtggatttttatttgactttggatgggaaaacgccaatcagtgagatttgcagtttcacgtatcatgttatgcatggtagttccttggaggctaggctgccgccatctgaggatgattacaaaaggacaaatcttaagatgcagatgagactagctcgcttgttgtttgccacaaacaagaaaaagatagcaccaaagttgcttgtagaaggcaccaaagttgccaatctcatgtcagcattaccagagaaggaatggatggatttgtggaatattcttagtgacccagaaggcacatatgttcctgttactgaaagcttgcttgaactagtgttgcgaaataggttgcaagagtggcttgttgaaatggtaatggaaggtcataagtctactggtcgcgatgatctaggacaaggagctatccatctgtgttctttcctaggttatacttgggctattcgattgttttctttgtcggggttctccttggatttccgtgattcttctggttggactgctttacactgggctgcataccacgggagggaaaggatggttgccactcttttatctgctggagcaaatccaagtttagttacagaccctactcccgaatcccctgctggactcactgctgctgatcttgcagcaagacaaggttacgatggcttggcagcatatcttgctgagaaaggattgactgcacattttgaggccatgtcactgtccaaggatactgagcaatcaccatcaaagactaggctaacaaaactacaaagcgagaagtttgagcaccttagtgaacaagaactttgcttaaaagaatctctagcagcctatcgcaatgctgctgatgctgccagtaatatccaagctgcactcagggagagaactcttaagcttcaaacaaaagcaattcaattggctaatcctgagattgaagcatctgagatagttgctgctatgaagattcaacatgcatttcggaactacaacagaaagaaagcaatgagagctgctgcacgaatacagagtcatttccgtacatggaagatgaggaggaacttcattaacatgcgaagacaagttatcaggatacaagctgcgtaccgaggtcatcaagtgagaaggcagtaccgcaaggtaatatggtctgttggaattgttgagaaagcaattttgcgatggagaaagaagagaaaaggccttcgtgggatcgcatctggaatgccagtagttatgactgtggatgccgaagcagaaccagcaagtactgcagaagaagacttcttccaggccggccggcaacaagccgaggacaggttcaatagatctgtggttcgcgttcaagccctgttccgttcttacaaggcacaacaggagtaccggaggatgaagattgctcatgaggaggccaagattgagttcagtgaagggcagctaggagcagcatgcaggagttga</cdnaseq>|
| + | * Division of Applied Life Science (Brain Korea 21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Gyeongsang National University, Jinju 660-701, Korea |
| − | AA = <aaseq>MAGAGGWDPLVGSEIHGFLTYPDLNYEKLVAEAAARWFRPNEIY AILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKL KIGNEERVHVYYARGEDDPNFFRRCYWLLDKDLERIVLVHYRQTAEENAMAPPNPEPE VADVPTVNLIHYTSPLTSADSTSGHTELSLPEEINSHGGISASSETGNHDSSLEEFWA NLLESSIKNDPKVVTSACGGSFVSSQQINNGPKNSGNIVNTSMASNAIPALNVVSETY ATNHGLNQVNANHFGALKHQGDQTQSLLASDVDSQSDQFISSSVKSPMDGNTSIPNEV PARQNSLGLWKYLDDDSPGLGDNPSSVPQSFCPVTNERLLEINEISPEWAYSTETTKV VVIGNFYEQYKHLAGSAMFGVFGEQCVAGDIVQTGVYRFMVGPHTPGKVDFYLTLDGK TPISEICSFTYHVMHGSSLEARLPPSEDDYKRTNLKMQMRLARLLFATNKKKIAPKLL VEGTKVANLMSALPEKEWMDLWNILSDPEGTYVPVTESLLELVLRNRLQEWLVEMVME GHKSTGRDDLGQGAIHLCSFLGYTWAIRLFSLSGFSLDFRDSSGWTALHWAAYHGRER MVATLLSAGANPSLVTDPTPESPAGLTAADLAARQGYDGLAAYLAEKGLTAHFEAMSL SKDTEQSPSKTRLTKLQSEKFEHLSEQELCLKESLAAYRNAADAASNIQAALRERTLK LQTKAIQLANPEIEASEIVAAMKIQHAFRNYNRKKAMRAAARIQSHFRTWKMRRNFIN MRRQVIRIQAAYRGHQVRRQYRKVIWSVGIVEKAILRWRKKRKGLRGIASGMPVVMTV DAEAEPASTAEEDFFQAGRQQAEDRFNRSVVRVQALFRSYKAQQEYRRMKIAHEEAKI EFSEGQLGAACRS</aaseq>|
| + | * National Institute of Crop Science, Rural Development Administration, Suwon 441-857, Korea |
| − | DNA = <dnaseqindica>12445..12489#11845..12162#11048..11603#9953..10644#8916..9296#8289..8371#8118..8213#7744..7912#6987..7032#6141..6229#5939..6054#753..878#50..116#gttgtcttcctctgcgagagcagcagcggcggaggcggaggcggcggccatggcgggagcgggcggatgggacccgctcgtcggctccgagatccacggtttcctcacttacccaggttgccgccgccccccatccccgaccgcggccttttctatttcctctcgttttgttttgtttttttggttgattgagttcggcgcggggggatttctatggttcttcgtggtggtttttgctcttttttttttgtctcgtgctgtcttttctcggcgtgtttggttcgtttggggtttgagacactggcgtttgatgttttctcctgctagctgctgtagtttcctgtttttttaggtgttactgttcacacatttcccccatgttgagctgctgctgtgctggataggtgtgtttctgcggataatccttgctgtttgtggttcggtagcttgattgaagtggccgattgcttgttttggtttcgtgttgcttgtgttgttggaatttggtcggatgcttcgtagtttgcggggtttttgacagttcaattcctttgtctatctgattcttcctgcttaaatttcgttccgttaagtttcagggatttgcggctagctcaaagcttggtgttttttttttctaagctttagtttggcctgatatttttaggacactgagtttatgccgcattcgctgttgaaagaaataaatcaattttgagctgacttcttgattggtgtatgtgtcgtggtagacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtatgtgttcatgcacccctttagaccctcatgtacctgccatggtcttttctttgatggtatgatgtgaactcaagggagcagagcataggggcacgttgattggtaaagtgttagagtgtaggaaggcagtcatttcttgatcttttggattggctgtcttgtgtgtgaaaaaaaaatgctgtcttgagtttagggcatcttggtccatcgcttaagaaataatgtgatggttgattttgcgatggtcttgcggtgttgagcacctgagcgtcccatcattcgcgttagatggatgaaagcatgttgagtattgaaatacatttacagtaggcataattgaatgaaattgctcttgttaagaaatatttgtgcaccaagagccgtattgttactattctgatcaaaataccatctctaggatcagattatggaatattggatgtagaaaaatttatatgctcccaacatcagttaggttaatattgctcaaaatgtaggtatccacttacgtattttctatatatcagttacctgaatttattatttgtcagcaacctcaccttgtacacaacattgcctaaaacttgctgacaactttaatagagctttaatgaaaatttttgtttggtttgattttatttatatgggaacatttttgttttattcttttgttgctggggattcatgaaactaaaattttgtgtttatgaacatcttttgttaccacgcatgcacaggaatttagtccttattcttatcctgtctatcttgagtattaaaatttcaaaatatcatctctatgatcataacagaatgtgcaatcatgcataacatgaatgcgtttctgtgtcttgaatgtaaactagttatcgtgcacgtgcaaagcacgttttagcaattcatatgcgaaagtacaacaataaaatgggacctttttcatgcagtgcactccatacgaattcttccggtaaaaattagagtttcatatcatagtatgatcgcaatttggatgatctttacaaaacatgcactttgtatcctagagtgacaacataagatgcagtgcaccagctgccttcattaacagaaattccaaagcttcgtatgaatgccccacaggacaactacatagaaacatgtgcatagatatctcatgaatccaaaaaaaaaaaaactttggagcatctctggctgagaaaataatttgaatcatgacactatatgatcactgtttctatgagattgctagaatcaccatctggtaaaacaagttcatcagctagcatctcatattctcattgatagaattgcattacagagaggaatacaatagcccatggttagcaatctcatggcggttgacctcaaacatatcaaaacctaagctaaagtgcaaaaggaaaagagaaaattaatatgatattctgccaccaagccacaccaatgtttgtaatatccatagcatgagaaatctttctccattctgtgtaaaataatgttcatttcaaacttgaagatccattactttcccaccagtattgttcctatcaaaacttaattgagatacatacgttgaaaaactatataatcatatccaaagtctaatgataatgaattaatgaatatataactatcgaagatcttttatgtctgaagtgagcaaatatattgaaaactgcattgaaagatgaacaagatgccatggaaggtaccgaagtatttcatgggacatgcagcttttataccaattttcatcatcacattttgtctcccttccatatctcgtccaagagaaacacaaaactgatcaatgtgtaaatttaactatcatcaatccctctccatagcctctccttggccttttaggcattgtgacaaacaacatcaataaagacatatacctactgatggccacatgaatgattattggatggccaatatctataagaaattctatgcaattacaggaacaacaataattgcatttaataatgagaaaaatattccctccataacgtttattgctgaagaatagtttgatatttcattttccaaaacactaagataatcattatatgtatggaactgtctatatgtgaattgtttatgatgcagtataatattattatattgaagctgcaacatagtgtttctaaattacctgtccttgttgacaatgttgacttgcaaagcctatcctattattcatcaccaagggaagtggccagcagcagcacattgggagaggaatgagattatatgtaattcttaaacaaaaaagaataatctgtcacctgtgtacatcaacaatgtaaattttgaaggtagcatcataacattagcatcacactgccatattgtcagaaatcaggatttctccttatttcagaggattaattgaaagcagaggaaccaaaaataagtgcattaaataaacaaaaggctgctcattaatctgatgagactctatcgttcctaatatacagacacaagattttgaattcagacttgaatctacaattcaactgtcagattgtatgaattggagatggggattccaaactcaccaacaaattcgtcacggcaacatcgagctgaatcaggtctcaacatgtcaccattcagctgaacaacaaaatacaaatagaggaccaatgggaaatcataattgacacatcgtttgccacaaaaaagcttgagcataagaaatagtgaatgattaaaaatgaaaaatgagagtcagctgccagcaacaaacgacatcgtcacgtaaaagcacttttaatacatacgctatagatagagtattatcacaggccaatataaattgtctgcaggtaaaataatggtagcaaacaaatcaaaatttagaaaagcaaaataatggacctgtcattgcagaattttgcggtgtagggcttagtacattacccattgaaattaatcagaatgcatggtgattgtgcactatcatatcatcgtagctcaataactccaagtctatttaattgaattaaaggcaaagtattagtgaactctaaaataaagtccacactctattggatgcaataaaattttgatgtttcttttagcatgaaaatatcagaagtacaattaattagaaacgtgtgacatagaaatactacctgtcattataatgctattctgttgattaatgtggaaaactatgcagttcttttgatttccatctgagctttggatttcaccacatgtgtcaccagagttcagtgcaataaaatttcttctactgcctaaaatcatacatcatgaattgttgtgagtactaaaagaagtagcagcatctaaaagtatagcaggttctttcctgcttgaactttcagttgcaccactatcatggccagagtctcccattgagtcagtagcagtagttttcacttcttaataatagtctgtatctagcgaagaaaaaaaactatataatagcaaaacagaaatatattgaacatatgtctgcactgcagattcctacaaatatgcatactgatcatgtctccttatccatcacacaaagcagcatcatcgtcgtgtctgagccatctgcagacatgaacagcaggtggaattagcgtcatgctaccatcgctggccccagtgccgcccttcttgctccacccatgcctagcacaaaggaacctccatacacacacacccggcacatacggacttttgcaaacctctgcatccacctacatacagacatacagctccaagcacatatacatctgtgacaaacaacacactgttttttattttcattataaaaagtcatggttcttgatccatctccaccaatgcttctcctaatcagaaaaaggtaacaccaataaaagatttgatcgatctccaccatatgcacaaatctaacaacacaaatcatcccaggggtgacagcaaaagaagggttgtgtgttctttttg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| + | * Department of Plant Science, Seoul National University, Seoul 151-742, Korea, 4School of Applied Biosciences, Kyungpook National University, Daegu 702-701, Korea |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066207.1 RefSeq:Os07g0490200]|
| + | ==References== |
| − | }}
| + | <references> |
| − | [[Category:Genes]] | + | * <ref name="ref1"> |
| − | [[Category:Japonica mRNA]]
| + | Koo SC, Choi MS, Chun HJ, Shin DB, Park BS, Kim YH, Park HM, Seo HS, Song JT, |
| − | [[Category:Oryza Sativa Japonica Group]] | + | Kang KY, Yun DJ, Chung WS, Cho MJ, Kim MC. The calmodulin-binding transcription |
| − | [[Category:Japonica Genes]] | + | factor OsCBT suppresses defense responses to pathogens in rice. Mol Cells. 2009 |
| − | [[Category:Japonica Chromosome 7]]
| + | May 31;27(5):563-70. doi: 10.1007/s10059-009-0081-4. PubMed PMID: 19466605. |
| − | [[Category:Chromosome 7]]
| + | |
| | + | </ref> |
| | + | </references> |
| | + | |
| | + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
