Difference between revisions of "Os07g0647800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0647800| Description = Conserved hypothetical protein| Version = NM_001067007.1 GI:115473746 GeneID:4344112| Length = 3991 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0647800|
 
GeneName = Os07g0647800|

Revision as of 20:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0647800

Description

Conserved hypothetical protein

Version

NM_001067007.1 GI:115473746 GeneID:4344112

Length

3991 bp

Definition

Oryza sativa Japonica Group Os07g0647800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27710953..27714943

Sequence Coding Region

27712444..27712639,27712713..27712825,27712932..27712997,27713081..27713218,27713726..27713821
,27713915..27714039,27714544..27714596,27714681..27714757

Expression

GEO Profiles:Os07g0647800

Genome Context

<gbrowseImage1> name=NC_008400:27710953..27714943 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27710953..27714943 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgatcccatggggcggagtcgggtgctgcctcagcgccgcggcgctgtatctcctcgggaggagcagcggcagggatgcggaggtgctgcgatcggtggcgagggccggaagcacgaaggatttggctgctatattggacactgcaagtaaggtcctgccacttgtagtggcagtctctggacgggttggttcagatacaccacttatctgccaacaaagtggcatgagaggtgtaatagtagaggaaacggcagaacaacacttcctaaagcacaacgatgctggatcatggattcaagattccgctgtgatgctttctgttagcaaagaagttccatggtacctggatgatggtaccggccgtgtttttgttgttggagctcgtggtgcagctgggttagttttaactgttgctagcgaagtttttgaggagtcagggcggacacttgtgcgtggaactctagactatttacaagggctgaagatgcttggagtcaagagaactgaaagggttcttccaactggaacttcattgactgttgttggtgaggccattaaagatgatgttggaactattcgaattcagcgaccacacaaaggaccattttatgtatccccgaaaagcatcgatcaacttatcatgaatcttgggaaatgggccaagttataccagcttgcttccatgggatttgcagcatttggtgtctttcttcttgcaaagcgtgcactacagcattttctcgaaagaaaacgacgacatgaattacagaagaggtgtgtgctaaccaaccacttatttggatttagacggacatgttactcccatttacattcttcagtggtttgctcactttgctag</cdnaseq>

Protein Sequence

<aaseq>MLIPWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARAGSTKDLA AILDTASKVLPLVVAVSGRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSWIQD SAVMLSVSKEVPWYLDDGTGRVFVVGARGAAGLVLTVASEVFEESGRTLVRGTLDYLQ GLKMLGVKRTERVLPTGTSLTVVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDQLIMNL GKWAKLYQLASMGFAAFGVFLLAKRALQHFLERKRRHELQKRCVLTNHLFGFRRTCYS HLHSSVVCSLC</aaseq>

Gene Sequence

<dnaseqindica>2305..2500#2119..2231#1947..2012#1726..1863#1123..1218#905..1029#348..400#187..263#actcctcgtatcctgttctttgcttgcctcccggtccccctccccgccgcctcctcctcttccctcgccgcgaaaaaggggggaaaataaaaataaaatttcacggcttcatctcctcgtcgtcctcctcctcactgatctccccccccccccggattcggtgctcgcctggcgattccttgcgagatgttgatcccatggggcggagtcgggtgctgcctcagcgccgcggcgctgtatctcctcgggaggagcagcggcaggtgcgggatttttgcagggcggcatttttttgggcgattttttggggggattttggtggttctgaccggggatttgttgctcagggatgcggaggtgctgcgatcggtggcgagggccggaagcacgaaggatttgggtgagcgagcgagcgagggtttggtttggtttgatgttttgttgggtgtctgctaaatacgtgcttaattagctggattctgcagtaattctattactctgcggttttgttaatttattgtattgaggttaatgtaccgtgtacgtggcttttggggaaatttttatgcttcgagctaattcaatcctagtgatgcatgagataaagtgttaggagaatatttcaggtccatctagattcagtgatgaagcagtagacctctgtgtcaccactttctccagagaagcacaatttgttcttgtagcacgcgttcaaaacctgagagttgttgtggtaattgaagtccagcattaagatactacaagaatttataactttattgtagtgtgtcaatctgtttttttttttataaatgaagtttttgtaattttgtccaattaggtacatacataatactacctttttgtcagttttgttttgacctatctgtattgtcttcaacagctgctatattggacactgcaagtaaggtcctgccacttgtagtggcagtctctggacgggttggttcagatacaccacttatctgccaacaaagtggcatgagaggtgtaatagtagaggaaacggtatctattggttccatttctacggtttccttttcttttagttttgtggcaagcatatcctagcaattttacttaaccattttcctctggtaggcagaacaacacttcctaaagcacaacgatgctggatcatggattcaagattccgctgtgatgctttctgttagcaaagaagttccatggtacctggtaattaactgctgtagttgttatatactaattttctttggttctattgaaacaagtaattcagtttagtctcgatatcaaacagtgccattatgtgtccaatcttggtgactgtatatcagctgatttattcaatcttggatttatagtagatgaaccatctaatgtcatatggatgtctggacttctgtaataatcttgctgatatagcttgttctgtgtataaaccttgtttgtcagccccatagcctaaccctacctacatcgagctcctccatgtaaacctaatgacaagacctcatcatctagattatttgttaaaaagctgatgaacccaattttaaggtagcaaaagagtttttttaatattgagcacaaatggcttctcaagaaaataaaggaaaggagcttgattcttttaacatactatttagagctcttttagtatcataaattgcatattaggttcttagatgctcaatactactttaatataattcaccacaggatgatggtaccggccgtgtttttgttgttggagctcgtggtgcagctgggttagttttaactgttgctagcgaagtttttgaggagtcagggcggacacttgtgcgtggaactctagactatttacaagggctgaaggttagtacttagtaacgattgcatttttattaatgtaaatgcttgtagtagtattattcatgtttaagaaataatgcttgtagatgcttggagtcaagagaactgaaagggttcttccaactggaacttcattgactgttgttggtgaggtaattcatagctttaattcgtctgcaatgccttgtgttggtgccctattttcctttacatggctaagtcttgctttcgtttttgattcttatgttgtatgaataggccattaaagatgatgttggaactattcgaattcagcgaccacacaaaggaccattttatgtatccccgaaaagcatcgatcaacttatcatgaatcttgggaaatgggccaagtatgaagatgcagtagaatattctctctctttttaggcttcttgaggctaatagtgtgttttactacaacaggttataccagcttgcttccatgggatttgcagcatttggtgtctttcttcttgcaaagcgtgcactacagcattttctcgaaagaaaacgacgacatgaattacagaagaggtgtgtgctaaccaaccacttatttggatttagacggacatgttactcccatttacattcttcagtggtttgctcactttgctagacatggtcagaatgagatgctttggaacatcttgtaatgttcaatagcattgtgatctctgtatcttttaaattgtggaacctgcatgtgcttccagcagctaatatatatcattaggacaaaactgaaatggaagacattggagatgctgtcttgaaaaaagttttaccctgggagtaattttatatcgggggtgaaaatcacaaactaacattgtagcatacagatggacactaggatatgttttgtaaccattgacgattttgctaatgcaagatactgaaaatgttgttacaatgcattattttttccatacagggttcatgctgctgctgcacaaagacaagctagagaagctgaaggtgatttttcatttttcttatcaattggttaggctattttatcataacttgttcatgtcttataacatcagttttattttgtacagggggcaatggtacatcagatgtagattctaacaataaaaaggatcaattggtcttggacatatgtgtcatatgccttgaacaggaatataatgctgtttttgtgccgtaagtatcttatattttgcattccatcatatagctttactcttagcctcttagcaatgagaactgtctatatattgctgaataataaaataactctttaaacattactatagactatgcattacattttttgttggaatctgatcaaatatttgaattgaagagtagttaccttatcattacattttgagctctgattggtacaaaattttgattttgtttctgaatcacccccattgtcatctttgtgatcgatacatctctttatgcaacttttgttctcattaaactgtcacctcaaaaatttatgaatgaatatgtaaatcaaacaccgtgcaggtgtggccacatgtgctgctgtatgaactgctcttctcatttgacgaattgtccactttgccggagaagaattgaccaagctgtgagaactttccgccattgacagcacttcgatgcaaaatctggtaccgcatctttcagatccacttgattcttggaatgtggactgctgtcacctgattcttggaatgtgtgtcacctgcgtactccctctgtccagaaaaactcaaccgaggggatgacccctcctagtacaacgaatctggacagaatccaagaggggatgtgacccctcctaggttgagttctttcgggatggaaggagtatgacatttgatctgcagtattgcgccgaagcaacgcaggtaaaaactcataataggatatactttctggccatcatgtcgattgctgttcttgcctgtagtgtacaatcgcgtccagaatgtcttgtgtaaatgtgcattggttttcacagcacgcttacttgttagtaacatggatgttaatatttctttgtgcccagtgtatcctgcctattaggggtatgaacttgttttttcttttttcttatgaatggaatggttcttgtgtactc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0647800, RefSeq:Os07g0647800