Difference between revisions of "Os07g0669100"

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(Created page with "{{JaponicaGene| GeneName = Os07g0669100| Description = Similar to Xylose isomerase (EC 5.3.1.5)| Version = NM_001067120.1 GI:115473972 GeneID:4344231| Length = 4237 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0669100|
 
GeneName = Os07g0669100|

Revision as of 20:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0669100

Description

Similar to Xylose isomerase (EC 5.3.1.5)

Version

NM_001067120.1 GI:115473972 GeneID:4344231

Length

4237 bp

Definition

Oryza sativa Japonica Group Os07g0669100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28932529..28936765

Sequence Coding Region

28932743..28932778,28932887..28932964,28933055..28933126,28933205..28933304,28933405..28933445
,28933539..28933609,28933724..28933803,28933880..28933931,28934113..28934168
,28934243..28934288,28934368..28934419,28934524..28934625,28934704..28934758
,28934838..28934917,28935008..28935058,28935479..28935570,28935665..28935794
,28935893..28935967,28936170..28936280,28936374..28936433

Expression

GEO Profiles:Os07g0669100

Genome Context

<gbrowseImage1> name=NC_008400:28932529..28936765 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28932529..28936765 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgggggcaaagcttttgctcttactggtggcctcatctctatgtctatctgctgcgatcgctacgcagcaaacctgtccggccgacctcgatagcaagtgtggtgatgctgcttcaggggattgggaaggggagttcttccctggcatccccaagatcaagtatgagggtccaagcagcaagaacccgcttgcttacaagtggtacaatgctgaggaagtgattcttgggaagaagatgaaggattggatgcggttcagcgtggccttttggcatacgttccgtggtactggaggagatccttttggtgcccctacaaagtcttggccttgggaggatggcacaaattcgttggacatggctaagagaagaatgagagctcactttgagttcatggagaagcttggagttgacaggtggtgcttccatgacagggatattgcccctgatggcaaaacactcacggaaacaaataaaaatttggatgagatagttgaactggcaaagaaactccaggaggagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatgcacggtgctgctactagcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagctttagaggtcacccactacctaggcggtgaaaactatgttttctggggaggaagagagggttaccaaactcttcttaatactgacatgaagagagaacttgaccatttggctagttttcttcaagctgcagttgactacaagaagaagattggatttaatggaacactcttgatagagcctaaaccacaagaacccacaaaacaccagtacgattgggatgttgcaaccacattctctttcctacagaaatatggtctaacaggagaattcaagataaatgttgaatgcaaccacgctactctatctggacatagctgccaccatgagcttgagactgcaagaattaatggtctgcttgggaatattgatgccaacactggtgatccccagatcggttgggacaccgatcagttccttacagatatttcagaggctactttggttatgtcaagtgtggttaagaatggtgggcttgcacctggtggattcaactttgatgccaaattgaggagggagagtactgatgttgaggacatgtttctggctcatatatcgggaatggacaccctagcccgcggccttcggaatgttgtcaagctgatcgaggatggttccctggatgagcttgttcgcaagcgctaccagagttttgatagtgagatcggtgccttgattgaggctgggaaaggagacttcgagacactagagaagaaggttctggagtggggtgaacccattgttccatctggcaagcaggaactggctgagattctgttccaagctgctctatag</cdnaseq>

Protein Sequence

<aaseq>MMGAKLLLLLVASSLCLSAAIATQQTCPADLDSKCGDAASGDWE GEFFPGIPKIKYEGPSSKNPLAYKWYNAEEVILGKKMKDWMRFSVAFWHTFRGTGGDP FGAPTKSWPWEDGTNSLDMAKRRMRAHFEFMEKLGVDRWCFHDRDIAPDGKTLTETNK NLDEIVELAKKLQEETNIKPLWGTAQLFMHPRYMHGAATSPEVKVYAYGAAQVKKALE VTHYLGGENYVFWGGREGYQTLLNTDMKRELDHLASFLQAAVDYKKKIGFNGTLLIEP KPQEPTKHQYDWDVATTFSFLQKYGLTGEFKINVECNHATLSGHSCHHELETARINGL LGNIDANTGDPQIGWDTDQFLTDISEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDV EDMFLAHISGMDTLARGLRNVVKLIEDGSLDELVRKRYQSFDSEIGALIEAGKGDFET LEKKVLEWGEPIVPSGKQELAEILFQAAL</aaseq>

Gene Sequence

<dnaseqindica>3988..4023#3802..3879#3640..3711#3462..3561#3321..3361#3157..3227#2963..3042#2835..2886#2598..2653#2478..2523#2347..2398#2141..2242#2008..2062#1849..1928#1708..1758#1196..1287#972..1101#799..873#486..596#333..392#atccccctcgcgattacctctcctctcctctcctcccccattcatcgtccccctccgccgccgccgctgcaggtatcctctcctcgcagattggagatttcttgtggatttcgattgatttttgtgtgggcgatggactgactccacctggtttggattagtttgggagttcttcaatctttgatcttttatttatttactgtgcgcaatcaaatcggaaactttctggctggtcttttatttatttctctctcactcgtcaattcactgtggttactgatttgtttgctgctcttcaggcccgccgctccgctgctggtcctgctgctgccatgatgggggcaaagcttttgctcttactggtggcctcatctctatgtctatctgctgcggtaagtgatcctgactagttagtgatgtttgatttctacggtggaaatgtggtctggttgtggttgtaattcagttctgtgttgtggttgcagatcgctacgcagcaaacctgtccggccgacctcgatagcaagtgtggtgatgctgcttcaggggattgggaaggggagttcttccctggcatccccaagatcaagtatgaggtgagggaggccatgaaagcttacagctttgattagattattggataaagcttggaaatttatattattgtattggactataactgctgtgactctttgattagattacttgataaagcttagaaatttttagattgttatatattggactaaaactgctgtgacttgtgagctaagactttgttgcacaattgcactgcagggtccaagcagcaagaacccgcttgcttacaagtggtacaatgctgaggaagtgattcttgggaagaagatgaaggtagggtttatgaattatgtcttgttgaacagatccttttattcccttttgcgtcatggaatacatctgagttttgtattttatctgcttgcgtttaggattggatgcggttcagcgtggccttttggcatacgttccgtggtactggaggagatccttttggtgcccctacaaagtcttggccttgggaggatggcacaaattcgttggacatggctaagagaagaagtatggctattacctggtttcatgtttaggttcagttcattatgaatttgcacgtttgcttaatcaacaacttctgtctgaattgttattgcagtgagagctcactttgagttcatggagaagcttggagttgacaggtggtgcttccatgacagggatattgcccctgatggcaaaacactcacggtatgccttcatgcataatagtcttattatttgtcttcgaatgtggtttgaacttgtgaagctcgaggctatagctatttatcatgcctacccttggttaacagagtaactattttaatcatctatttaattaaaactattttagatattggaaaagctccaatcctttatatctgaatataccttcagaacaacacataatatttggtcttatgtacttttcaagatgtgctttactcctgtggaatatttctgttaaatttttggaattttatttggtcttatttacttttgaagatgtgttttactcctgtggaatatttctgttaaatttttggaatttctgggtttctgtgtgatgtagctctggccaccagtggaaggtctggtattttataagcttcttgtttcacattgcaggaaacaaataaaaatttggatgagatagttgaactggcaaagaaactccaggttacatttctgcaaccttaaaattgttagcattttgtcgaaatgcattggttctgctctttgctcagatatgatctgaacttcatgcaggaggagaccaatataaaaccactgtgggggactgcacagcttttcatgcacccgcgctacatgcacggtgctgctactaggtagatcagttttgctgcattttgcatgtaaatttggagtatgttctgaagctaatagaagccttcattggtactgcagcccagaggttaaagtgtatgcttatggtgctgctcaagttaagaaagctttagaggtgggttatctttgaactctgaacattgtgataggttttccataagtcaattcttgatttggcttttaccacttgaaggtcacccactacctaggcggtgaaaactatgttttctggggaggaagagagggttaccaaactcttcttaatactgacatgaagagagaacttgaccatttggtatgagtcttgacatattgttactgttcctctgtttctgttacacttactaccactcactttatctccattttgatttatcattttgccgtgttgtcatccaggctagttttcttcaagctgcagttgactacaagaagaagattggatttaatggtactcacatgtcactgctatatcacatttttccatgtatgacatggatataatactgaattttgtttttatttttcaggaacactcttgatagagcctaaaccacaagaacccacaaaacaccagtatgcttattagtttacattaacaaaatgtccacaggattaaacaatcctaacccttgtttgtcctctcccaggtacgattgggatgttgcaaccacattctctttcctacagaaatatggtctaacaggtacatatgtagtttgttattgggtttacagtgatttcgaaagttgaactgttatttggatttcaggaattcatgtattaacaccattagtgttttgaacaattttatttactgctgtctgtctggagttaaccgtgtattgtgaaataatctaaagtacattctttttcaccatatacaggagaattcaagataaatgttgaatgcaaccacgctactctatctggacataggttagtttcttgcttccctaacgtcattcaaggtagcttacagtggcagtgtcataactccatggaaaatttgcagctgccaccatgagcttgagactgcaagaattaatggtctgcttgggaatattgatgccaacactggtgatccccagatcggtatgtgcgcatgcctttagctcctgaaagtcacattatgcctgaaattcttgtttgatttcgatttgtgacatacataggatataacatttcaatgcttatatatatggacaggttgggacaccgatcagttccttacagatatttcagaggctactttggttatgtcaagtgtggttaagaatgtgagttgaattaataatatgttgccttgatatattcaggtaattatcaatatgatactattcatgagttgtaatgttttgatatggttgtagggtgggcttgcacctggtggattcaactttgatgccaaattgttggttcccgctgacattgttttttttttttgtgtgtgtgtaaattggtctctgattcaactgaatttcaattgacttggaattctattatgtcaacaggaggagggagagtactgatgttgaggacatgtttctggctcatatatcgggaatggacaccctagcccgcggccttcggaatgttgtcaagctgatcgaggtaactggaacattacagccttctaaagtttttattcagggatctagatgtaatctttttatctctttctgctgttaggatggttccctggatgagcttgttcgcaagcgctaccagagttttgatagtgagatcggtgccttgattgaggtacaatgttcaactactttagagctcttgctttcttacacttggatgattgaattgaaacagtaacaattggctcatggtttcaaataggctgggaaaggagacttcgagacactagagaagaaggttctggagtggggtgaacccattgttccatctggcaagcaggtaactggaattataatatacgcatttaacttcatagtataatagaaatatctttgggttgatgattgctcatttttaactttgctttcatgtgatttctcaatacaggaactggctgagattctgttccaagctgctctatagatggtgccgtggtgctgttcatagttctaggaataaagcctagcacgcctttggaaacggaatgtgcattctatcattgtctactacgagcaataatctagttatagtttagttattagccttccatgcaatgaacttttgtacactacagcatggaacttaaataatgatgagttgtgcctttctaaactgaaataaaagagtcggtaccttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0669100, RefSeq:Os07g0669100