Difference between revisions of "Os07g0695800"

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(Created page with "{{JaponicaGene| GeneName = Os07g0695800| Description = Similar to 2-oxoglutarate dehydrogenase, E1 component| Version = NM_001067282.1 GI:115474296 GeneID:4344403| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0695800|
 
GeneName = Os07g0695800|

Revision as of 20:42, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0695800

Description

Similar to 2-oxoglutarate dehydrogenase, E1 component

Version

NM_001067282.1 GI:115474296 GeneID:4344403

Length

5558 bp

Definition

Oryza sativa Japonica Group Os07g0695800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:30317021..30322578

Sequence Coding Region

30317431..30318945,30319160..30319386,30319476..30319808,30319966..30320212,30320685..30320813
,30320898..30321113,30321191..30321314,30322114..30322349

Expression

GEO Profiles:Os07g0695800

Genome Context

<gbrowseImage1> name=NC_008400:30317021..30322578 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:30317021..30322578 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtggctccgcgccgcctcgggcctcgcccgccacgccctccgccgccgcgtgcccgtcgcttcccgtttcttccactcggcgcggccggcctggaggtcctccgccccggtgccccgcgccgtcccgctgtccaggcttaccgacagcttcctcgacggcaccagcagcgtctacctcgaggagctccagcgcgcatgggaggccgacccctcctccgtcgacgaatcctgggacaacttcttccgcaacttcctcggccaggccgcgccctcctccgccggcctctccggccagaccatccaggagagcatgcagctcctcctcctcgtccgtgcctaccaggttaacggccacatgaaggccaagctcgacccgctccgactcgacgaccgcgccgtcccggacgacctcgacctttccctctacggcttcaccgaagctgacctcgaccgcgagttcttcctcggcgtttggaggatggccggtttcctctccgacaaccgccccgtcctcaccctccgcgagatcctcagcaagctcgagcaggcctactgcggccccatcggctacgagtacatgcacatccctgacagggacaagtgcaactggctaagggacaagatcgagaccgccaagctcaaggagtacaacaaggaccgccgcctcgtcatgctggacaggctcatctggagcacccagtttgagaacttcctcgccaccaagtgggccactgccaagcgctttggcctcgagggcggcgagaccctcatccctggcatgaaagagatgtttgacagggctgccgaccttggcgtcgagaacattgtaatcggcatgccacacaggggaaggcttaatgtgcttggcaatgttgtccgcaagcccttgtcgcagattttcagtgagttcaccggtgggactaggcccgtcgaaggcgaggatggcctctacactggaaccggtgatgtcaagtaccatctgggcacctcctatgacaggccaactcgaggtggaaagaggatccacctatcgttggttgcgaatcccagtcacctcgaggctgtcgatcctgttgtcataggcaagacgcgggcaaagcaattttactccaatgatcttgacaggacaaagaacatgggcattctcatccatggagatggcagctttgctgggcagggtgttgtctatgagacacttcatctgagtgcccttccaagctatacaactggaggaaccatccacatcgttgtcaataaccaagttgccttcacaacagatccaagagccggcagatcttcgcagtattgtacggatgttgccaaagccttgaacgctcctatattccatgtaaacggtgatgatctggaggcagttgtacgagtttgtgagcttgcagctgagtggcgccagactttccattctgatgtggtagtcgatctgatctgttaccgacgatttggacataatgaaatcgatgagccctccttcacacagccaaagatgtatcaggttattaagaaccatcctagttcattaaagctttatgaacagaaactgctaggaacaggcgaagtctcaaaagaagacgttcagaagatccacgagaaagtcaacagaatcctgaatgaagagtttgcaaaaagcaaagattatgttcccaataagagggactggctttcggcttactggactggcttcaagtctcctgagcagatttcacgcgtccgcaacactggggttaatccaggggtgctgaaacgtgttggacaggcaattactactttacctgaagacttcaagccccacagggcagtgaagaagatttttgagcagcgtgcagcaatgatcgagagcggtgaaggaattgattgggccgttgctgaagcccttgcctttgcaacactcattgtggaaggcaaccatgttaggctgagtggacaggacgtggaaagaggaacttttagccaccgtcatgcagttctgcatgaccaggaaaacgggaggaaacattgcccacttgaccatgttgtgatgaatcaaaacgaggagctgtttaccgttagcaacagttcactttcagaatttgctgttcttggttttgaaatggggtactccatggagaaccctaattcactagtgctctgggaagctcagtttggtgacttttccaatggtgcacaagtgatgtttgaccagtttttgagtagtggagaggcaaaatggctgcgtcaaactggccttgtcgttctactgcctcatggttatgatggccaaggcccagagcattccagtgcccgtttggagcgctttcttcagatgagtgatgataatccttttgtcatacctgagatggaaccaacactccgcaagcagatccaggagtgtaattggcaagttgtgaacgtgacaacgcctgcaaactatttccatgtgctgcgtcgtcagatacatagggagttccggaagcccctgattgtaatggcccccaagaacctacttcggcacaaggattgcaagtcaaatctctctgagtttgatgatgttgaaggccatccaggtttcgataagcaaggaacacgcttcaagcggttgataaaggaccggaatgaccacaagcaagtcgaggagggtatcaaacgccttgtattgtgttctgggaaggtgtactatgagcttgatgaagaacggaagaagactgaacgcagtgatgttgcaatttgcagagttgaacaactttgtccattcccatatgatcttatccagagagagctaaaaagatatccaaatgcggagattgtctggtgccaagaggaacccatgaatatgggcgcatatagttacatctcccctcgcctgtacgcctctatgaagactcttgggcgtggttcattcgatgacatcaagtatgtgggcagggcgccttcagctgcgacagctactggcttcctgtcggttcatgcgcaggagcagacagagctggtaaagaaagcactgcaggcagagcctatcaagttcccctga</cdnaseq>

Protein Sequence

<aaseq>MAWLRAASGLARHALRRRVPVASRFFHSARPAWRSSAPVPRAVP LSRLTDSFLDGTSSVYLEELQRAWEADPSSVDESWDNFFRNFLGQAAPSSAGLSGQTI QESMQLLLLVRAYQVNGHMKAKLDPLRLDDRAVPDDLDLSLYGFTEADLDREFFLGVW RMAGFLSDNRPVLTLREILSKLEQAYCGPIGYEYMHIPDRDKCNWLRDKIETAKLKEY NKDRRLVMLDRLIWSTQFENFLATKWATAKRFGLEGGETLIPGMKEMFDRAADLGVEN IVIGMPHRGRLNVLGNVVRKPLSQIFSEFTGGTRPVEGEDGLYTGTGDVKYHLGTSYD RPTRGGKRIHLSLVANPSHLEAVDPVVIGKTRAKQFYSNDLDRTKNMGILIHGDGSFA GQGVVYETLHLSALPSYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIF HVNGDDLEAVVRVCELAAEWRQTFHSDVVVDLICYRRFGHNEIDEPSFTQPKMYQVIK NHPSSLKLYEQKLLGTGEVSKEDVQKIHEKVNRILNEEFAKSKDYVPNKRDWLSAYWT GFKSPEQISRVRNTGVNPGVLKRVGQAITTLPEDFKPHRAVKKIFEQRAAMIESGEGI DWAVAEALAFATLIVEGNHVRLSGQDVERGTFSHRHAVLHDQENGRKHCPLDHVVMNQ NEELFTVSNSSLSEFAVLGFEMGYSMENPNSLVLWEAQFGDFSNGAQVMFDQFLSSGE AKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMEPTLRKQIQECN WQVVNVTTPANYFHVLRRQIHREFRKPLIVMAPKNLLRHKDCKSNLSEFDDVEGHPGF DKQGTRFKRLIKDRNDHKQVEEGIKRLVLCSGKVYYELDEERKKTERSDVAICRVEQL CPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYISPRLYASMKTLGRGSFDDIKYV GRAPSAATATGFLSVHAQEQTELVKKALQAEPIKFP</aaseq>

Gene Sequence

<dnaseqindica>411..1925#2140..2366#2456..2788#2946..3192#3665..3793#3878..4093#4171..4294#5094..5329#tgaggatgcggcttcgaagttgaactaggcggcggtgggcccaccgcttccattcttctcgcctttttcttccaccgttgcgagttctctctgcctgcgctgcggctgcacccttccccaagtcggatttccattgcattctcgattccattccttccccctccccctctttcttcgacttggacttggccttccttcttcctcctcaacctcgacctcgatctaggtctacgctccgccctccgccccccgccccccgccgccgccaggtatgtattcttctctcctcctggggcctgggctaggaggctagggggctagggagacgaggtcccgagatttgccatactgatgaatgctgtttcgattcgattcgattccagggagggagccggagccggagccgatcgatggcgtggctccgcgccgcctcgggcctcgcccgccacgccctccgccgccgcgtgcccgtcgcttcccgtttcttccactcggcgcggccggcctggaggtcctccgccccggtgccccgcgccgtcccgctgtccaggcttaccgacagcttcctcgacggcaccagcagcgtctacctcgaggagctccagcgcgcatgggaggccgacccctcctccgtcgacgaatcctgggacaacttcttccgcaacttcctcggccaggccgcgccctcctccgccggcctctccggccagaccatccaggagagcatgcagctcctcctcctcgtccgtgcctaccaggttaacggccacatgaaggccaagctcgacccgctccgactcgacgaccgcgccgtcccggacgacctcgacctttccctctacggcttcaccgaagctgacctcgaccgcgagttcttcctcggcgtttggaggatggccggtttcctctccgacaaccgccccgtcctcaccctccgcgagatcctcagcaagctcgagcaggcctactgcggccccatcggctacgagtacatgcacatccctgacagggacaagtgcaactggctaagggacaagatcgagaccgccaagctcaaggagtacaacaaggaccgccgcctcgtcatgctggacaggctcatctggagcacccagtttgagaacttcctcgccaccaagtgggccactgccaagcgctttggcctcgagggcggcgagaccctcatccctggcatgaaagagatgtttgacagggctgccgaccttggcgtcgagaacattgtaatcggcatgccacacaggggaaggcttaatgtgcttggcaatgttgtccgcaagcccttgtcgcagattttcagtgagttcaccggtgggactaggcccgtcgaaggcgaggatggcctctacactggaaccggtgatgtcaagtaccatctgggcacctcctatgacaggccaactcgaggtggaaagaggatccacctatcgttggttgcgaatcccagtcacctcgaggctgtcgatcctgttgtcataggcaagacgcgggcaaagcaattttactccaatgatcttgacaggacaaagaacatgggcattctcatccatggagatggcagctttgctgggcagggtgttgtctatgagacacttcatctgagtgcccttccaagctatacaactggaggaaccatccacatcgttgtcaataaccaagttgccttcacaacagatccaagagccggcagatcttcgcagtattgtacggatgttgccaaagccttgaacgctcctatattccatgtaaacggtgatgatctggaggcagttgtacgagtttgtgagcttgcagctgagtggcgccagactttccattctgatgtggtagtcgatctgatctgttaccgacgatttggacataatgaaatcgatgagccctccttcacacagccaaagatgtatcaggtgatcctcattctactgatttcaattatttgtttatggatagctgatcgttttctcatataggttgcactcgcccattgctttatacctttgccttgttacttccttgcatttgatgttcagttgctgtcaatatgattgctacttgtgctgttttactattcttttttcctttccttttggagtgttcctgatgaaactttttctgtggcaggttattaagaaccatcctagttcattaaagctttatgaacagaaactgctaggaacaggcgaagtctcaaaagaagacgttcagaagatccacgagaaagtcaacagaatcctgaatgaagagtttgcaaaaagcaaagattatgttcccaataagagggactggctttcggcttactggactggcttcaagtctcctgagcagatttcacgcgtccgcaacactgggtaaccgcatcctttatactgatcatctctttgtaatttattccttcaccaaataccatccattatcatcgagagtgctttccctgcagggttaatccaggggtgctgaaacgtgttggacaggcaattactactttacctgaagacttcaagccccacagggcagtgaagaagatttttgagcagcgtgcagcaatgatcgagagcggtgaaggaattgattgggccgttgctgaagcccttgcctttgcaacactcattgtggaaggcaaccatgttaggctgagtggacaggacgtggaaagaggaacttttagccaccgtcatgcagttctgcatgaccaggaaaacgggaggaaacattgcccacttgaccatgttgtgatgaatcaaaacgaggagctgtttaccgttagcaacaggtaattacactttttggttctttcgtatgtacttttttttgtctagatgctaaatttggataaaacatcatctgcctttttcctattctttaattaagcctctagaaccttatcgtaaatgagaacaaatattgtctgatattatgtgttattgcagttcactttcagaatttgctgttcttggttttgaaatggggtactccatggagaaccctaattcactagtgctctgggaagctcagtttggtgacttttccaatggtgcacaagtgatgtttgaccagtttttgagtagtggagaggcaaaatggctgcgtcaaactggccttgtcgttctactgcctcatggttatgatggccaaggcccagagcattccagtgcccgtttggagcgctttcttcaggtaattctttgcagcaaactttcttcctctctgtcagatgcatctagtttagcccaagcccattcaatcacaagaagtctctttgttgattcaaactgctacataaaatgcgatgcacttctaaaatgccaattctttatgtttggcgaatcaatgaccatgtctggtattcatatttccaaggcataaattgttatatactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaattaatctagacacacatatatgtttagattcattaacatctatatgaatgtggacaatgctagaaagacttacattatgaaacggaggaagtacttgagatagtgtagccatagtgatgatcaagctctcttgcattttcataatttctggttgaatggtacgctcaattcttgtatatacactgctcacatgagattctaaattctgtccagatgagtgatgataatccttttgtcatacctgagatggaaccaacactccgcaagcagatccaggagtgtaattggcaagttgtgaacgtgacaacgcctgcaaactatttccatgtgctgcgtcgtcaggtctgtctatcttcagtatgcattccagatgctagcatgcaaattgcttttattaattttcgtctgttgttttgagggcattagatacatagggagttccggaagcccctgattgtaatggcccccaagaacctacttcggcacaaggattgcaagtcaaatctctctgagtttgatgatgttgaaggccatccaggtttcgataagcaaggaacacgcttcaagcggttgataaaggaccggaatgaccacaagcaagtcgaggagggtatcaaacgccttgtattgtgttctgggaaggtacataagactttgaaatttgatcatattaccagttcaatacaaatatgtgctgttattaaattgccattttgcaggtgtactatgagcttgatgaagaacggaagaagactgaacgcagtgatgttgcaatttgcagagttgaacaactttgtccattcccatatgatcttatccagagagagctaaaaagatatccaagtatgaatgcttttccccatgtatttaatccattacttgtgtgaatgcatgcatcatggtttgccatttccaccagcagttcctggaatttttggtcctcccggaaactgatgttggtaacctaacaacatttcaaatattttcatgcggtgatattgctttctttatggtatgctttggtatttctgcaccaatatttttgttttccgctccatgtgctgcacatatctgaggactgagtacacagcttcttgtttagaaaatattcacttgtcctccacatgtctgaggacagagtttgttgcttcttgataagaaaacctaggcagtcttggcactaatagttggtgatgcacagatagcgcacaagtatcactgggtggtctttgttccttactgatatggtggctagtctccaccagtgcacttttacgtcaaggcatcccaagttgttacaatgtactccatccgttttatattataagtcatttaactttttttttctagtcaaacattgttaagtttgaccaagtttatagaaaaaattaacaatatctaaaatatgagattagtttcattaaatctaacatggagtattgtttgacaatatgtttgttttgtgttgaaaatactactatatttttatataaatttgatcaattttgaagaagtttgactagaaaaaaagtcaaacgacttataatatgaaatggagggagtagtatgcattgttatgccctaccacattttagttgctgaactgttctgattatcataattgcaccatcttaatttgtagatgcggagattgtctggtgccaagaggaacccatgaatatgggcgcatatagttacatctcccctcgcctgtacgcctctatgaagactcttgggcgtggttcattcgatgacatcaagtatgtgggcagggcgccttcagctgcgacagctactggcttcctgtcggttcatgcgcaggagcagacagagctggtaaagaaagcactgcaggcagagcctatcaagttcccctgatatgatgcatctgtggtttccacttggtgcttatacttgtgcaagacaagtgtgtgcgagctcagctcgtccagcctttgcacacataccataccatcttaaaagttttgctatgtatttacaagctactgtttctctagcttgtttgaggcgattcgatttgaatgtcgtgaataatgcactatttgagccttcttatcgttgaggaggaacctgtttcgacgtgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0695800, RefSeq:Os07g0695800