Difference between revisions of "Os09g0489200"
(Created page with "{{JaponicaGene|
GeneName = Os09g0489200|
Description = Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein|
Version = NM_001070068.2 GI:2976096...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0489200| | GeneName = Os09g0489200| | ||
Revision as of 21:01, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0489200 |
|---|---|
| Description |
Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein |
| Version |
NM_001070068.2 GI:297609694 GeneID:4347435 |
| Length |
9182 bp |
| Definition |
Oryza sativa Japonica Group Os09g0489200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:19512028..19521209 |
| Sequence Coding Region |
19512028..19512064,19512881..19512921,19517283..19517399,19518042..19518134,19518810..19518953 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:19512028..19521209 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:19512028..19521209 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccggcggcgagccgccggcgccggcgacggaggcggaggaggggcggagggcggcgctgctgcgggagataaccgaggagggcgggttcgcgttcgtggcgtcggcggagaaggcggcgtgcggcgacctccgcgccgcggaggcggcgcgggagatggcgtgggagcagctccactcggggccgtggagcgaggtgggcgccgcgtggagggacgcctacgcgctcgcctgcctccacgtcgcgcggctccggcggctgggggcggccgccgccgaccgccgcgccgcgctcagggcgctcgacatgggcctcatcatgggggggaacctcctccgcgccgacctcgaggccgccatagcgcgcatcgtcgccgaccccggcggcggcggcgacgcggaggccgtcgacgaggagacccggaggtggagggaagggctcgagaggaatcgagacgtcgccgatgcacttaatattcttccggcaaagtctttatcttgtaagaaggttgagaggcgatcatgcatttctttggaggaatttatatgtgattactttttacgcgagtcccctgttataatcagtggaagcatcgatcattggcctgcaaggacaaagtggaaagacatccaatacctgaagaagattgctggagatcgaactgttcctgttgaagttggaaaaaattatgtgtgcagtgagtggaagcaggagctaatcactttctctcagttccttgagaggatgtggtcagctggctgtccttcaaacttgacatatctggctcagcatcccttgtttgaacagataaaagagctccatgaagatataatggttcctgactactgttatgctggtggaggggagcttcagtcacttaatgcatggtttggtccacacgggacagtgacaccattgcaccatgatccacatcacaacattttagctcaggtattgggaaggaagtatattagactatatcctgcttccatatctgaggacttgtacccacacacagaaactatgctaagtaacaccagtcaggtagatcttgacaacgttgatctgaaggagttcccacgggtagaaaatcttgatttcttggactgtatattggaggagggtgacttgctttacattccaccaaaatggtggcattacagttatgtgaataagttaagggaaaattatgcatctctaaaatcagatgcatgcaagacaatagaagggttcacataa</cdnaseq> |
| Protein Sequence |
<aaseq>MAGGEPPAPATEAEEGRRAALLREITEEGGFAFVASAEKAACGD LRAAEAAREMAWEQLHSGPWSEVGAAWRDAYALACLHVARLRRLGAAAADRRAALRAL DMGLIMGGNLLRADLEAAIARIVADPGGGGDAEAVDEETRRWREGLERNRDVADALNI LPAKSLSCKKVERRSCISLEEFICDYFLRESPVIISGSIDHWPARTKWKDIQYLKKIA GDRTVPVEVGKNYVCSEWKQELITFSQFLERMWSAGCPSNLTYLAQHPLFEQIKELHE DIMVPDYCYAGGGELQSLNAWFGPHGTVTPLHHDPHHNILAQVLGRKYIRLYPASISE DLYPHTETMLSNTSQVDLDNVDLKEFPRVENLDFLDCILEEGDLLYIPPKWWHYSYVN KLRENYASLKSDACKTIEGFT</aaseq> |
| Gene Sequence |
<dnaseqindica>9146..9182#8289..8329#3811..3927#3076..3168#2257..2400#2050..2181#873..1082#1..468#atggccggcggcgagccgccggcgccggcgacggaggcggaggaggggcggagggcggcgctgctgcgggagataaccgaggagggcgggttcgcgttcgtggcgtcggcggagaaggcggcgtgcggcgacctccgcgccgcggaggcggcgcgggagatggcgtgggagcagctccactcggggccgtggagcgaggtgggcgccgcgtggagggacgcctacgcgctcgcctgcctccacgtcgcgcggctccggcggctgggggcggccgccgccgaccgccgcgccgcgctcagggcgctcgacatgggcctcatcatgggggggaacctcctccgcgccgacctcgaggccgccatagcgcgcatcgtcgccgaccccggcggcggcggcgacgcggaggccgtcgacgaggagacccggaggtggagggaagggctcgagaggaatcgagacgtcgccgatgtgagatcgctgttgcctttgtaggattccgtgtttgttttgcgcgcttttctgcggcaatgcgggttccaacttagcttaattttttaggagctcattgcagtatgcgtaattaactatggctgcaactatataatttcatatatagttagatccggctaaggaacaaactggtggcgaaaaactgttaggggtgaactgccgtatatcaactcataaattgtaggaatatctttttttctggaatgatcagtgaagatttgtagattactccttatggtttgtaccgttcattctagttaccacttcgcttactcattttctgaatttgttgtatggataagggcattcataatcattaccttctgctcatcttgtattactactgacagtactttttccaggcacttaatattcttccggcaaagtctttatcttgtaagaaggttgagaggcgatcatgcatttctttggaggaatttatatgtgattactttttacgcgagtcccctgttataatcagtggaagcatcgatcattggcctgcaaggacaaagtggaaagacatccaatacctgaagaagattgctggagatcgaactgttcctgttgaagtaaatgccttttgctctttacactagatctggaagactattatatggaaacaagccatttctgtttagttaactttgtttaaactattcgatgcttatagtttttatagtgcattaatgatcatagtaacaaattcgagcgccaatattatgcccttttcaattgaagtaaaataaacaagtgcatctaaatttggtgctaagttttattacttatttgtaacaaacaacctatatacatcaaaatatgatatttagtgaacttggccagctgtctgcaagtaacattaagttacagtagattatttttgtatcttgtatttgtctctgactcaacttgcttgtacaaaggtgcaattttgagaaatgtgttacaatgtattcttccggttgcaagttggaacactaatcttttgccttggtgatcagaacagtaggtagattgaacctattttaagctgttccgttcatatttgttggtttcagtttgatgccatattgccatggtatttggttcagtattttaacttactcatattatgttcaatgctctttctgtatgaacttattttgccgaaagatttggtttatatgattgtgtgattgtttaacatgtacagctagattaactctacggcgctcttgcatgaacaatcttttcatacatagattattattattattcacaagacttctatgtgatggaacattttcctgaaatttgatcacagtagaatagttgtgtcgtaacatatttacccattaatttagtgtctcaaaaatgctatttattcaactgaattacatggctaatccaattagtatgcagcatttattctcccgtagttacctttttcatgcatcgagtaattatgcttgctcgaagacattttatgatgaaagttcctcctgtattgacctacctctgaatacttatatagcactaatgtaattgaatatctgtcaggttggaaaaaattatgtgtgcagtgagtggaagcaggagctaatcactttctctcagttccttgagaggatgtggtcagctggctgtccttcaaacttgacatatctggctcagcatcccttgtttgaacaggtaaccatgctatcattgtggattctctagtaagtataagcccaattgtcagttttttttttgtgccatttgcagataaaagagctccatgaagatataatggttcctgactactgttatgctggtggaggggagcttcagtcacttaatgcatggtttggtccacacgggacagtgacaccattgcaccatgatccacatcacaacattttagctcaggtatagtgtgagtactccttttcatattttttccccgtttggatctgttgtcaataattttttctagagtaaatactcttttttctatgagcaagttcaactgttcacactgtttatgctatcatgttactcatcacgttatgattaggtgctgattgacatgtcatctatgtaatgtctaaatgcataaatctactcagaattccgtagtcagctaccaggtagatataattgaaacagttcttcaaacttggcaacaatgataatctgataagtttaattgattgaaataattgaaacggttcttcaaaattggcaacaatgatcatctgataagtttaattgattggagcagtcaagaaaaagctaatattagcgaatcaatctttgtaaatgaaactttgcggtgcaaaggattcgagtgtccaaacattcaaatccatctgatactccttttccaaaaaaaaatagcgatctgatacatatttaagagtttagctgacaaattcaaatgcctttctgcacatcattaatccattgatggtggacggctgacccatttgagatgtttgcatagtactatcatagttcataactatcagtactcagcagtttcttttggtaacttttatcaacagttattggttaataatatctttgctttctccttgataggtattgggaaggaagtatattagactatatcctgcttccatatctgaggacttgtacccacacacagaaactatgctaagtaacaccagtcaggtacataactccgttcgattggttacatatttggaaaaaatatatatttgcaggtcatcaccatttaatatatatggatcgtgagccaaagatttgcattcttgggccattcaattgggcagtttggcggaaattttggatgtgacccgaaatgagacaagcgattagcgcatgattgactgagtattaattattacaaacttaaaaaatggatttgtttgatttttctaaagaaacttttatataaaaaacttttgcacgaaacacaccgtttagcagtttggatgcgtgctaacggaaaatgagtaagttgccaatgagttgctgaaaagaactcagcgttagtatcctcttcttgattactcttaagcatgaaattgcaagctggatctacttatcagagcattttaaagagctaaattaggaaacaataaatatgcttgacttccattttctaggtcaaccttttcagttacctgctagtcataaccatttctcagattatttggttaaaagcattatgtccaattctgttgtgtgcgatgtgaggatacagagtgttctagccccatgataattttagcactgcctatagtttctcctaactgcccatttatcaacacagctcaaatgtttgtgcaggtagatcttgacaacgttgatctgaaggagttcccacgggtagaaaatcttgatttcttggactgtatattggaggagggtgacttgctttacattccaccaaaatggtggcattacgtcagatctctttctattagtttctctgttagcttttggtggcgttcaactgttgtaccttcaaagggttcatagcgtcacattctggtctttgtacagcagaaccggaccacgggaccttggaaaacctgacagaaccttttgatttagcatccactattgcatggatgtggccatactattgcagatgtacattgttacttcccctgttatgactaaacatgtagttgctactataccaaatgtaacaatgacgatgtaccttctggtaacctctgatgcttgagcattgagcttggagggttggatttattgctcctgcaagattcatgttcaattcctgtgggcttattacaacccatttgcagatggggtcccattttcccaacaattatcagtaaggttattttcagtgtttctctacatgaggtgatcaatgctgttttagacagaagggggtcacatccctgtcctctgcatcatgtatacacaccggcaatgccatcgatgctattatgcataaattgagcgtacaatgtatgtctgccagtgagtacatttccccccttttttgtggtcttggggtatggctgtctaggggtgggtattcggtctaaccgaaaatttcggtctcggtcttcggtcttttcggtctttgaaaagtgaagaccgaatttcagtaaaaaatgtcaggaccgacaaattcggtctcggtctcggtctcagtcctgaccgaaattcaacaatattttcatatatgcaaagaaacaatagaaattttcaacacaaaaatcaaaaaaaaattcgtaagcacttatgagtaaagactcttaataggttgcatgcctagaagaagtaggatgtgaaaattagagattaatcctattaaatatagtggattgtatgttgcatttagatattttttttggtaattcggtcttttcggtctattcggttacccgaggggactaaccgaattgaccgaacaaaatccggtctttcactacctaggaccgaatttctcggtctcggtctcagtcttttcggttcggtttttttctgcccacccctatggctgcctgtcagatttgacattattttcatgtatcagattgttcaactgcaaacagtagtgagctacataagcagtagactactgtgttgagcagcagcaaagattttacttccaataatgaataagtcgtctgaagtctgaaacttattagatattgacatatctattcagaggggaaaaaaaccctcgagcataatgatctactcccccgtatcagaatataataagttttagagttggacacggttattaagaaagtaggtagatgtaaattgtaaagggttgtgattagatgagtagtgaaggtagatgggaaaaatgaatggtggagagttgcgattggttgggaagagaatgttggtggagaagttactctctccttttcacaatgtaagtcattctatcattttccacattcatattgatgttaatgaatctagacatatatatctatctaaattcattaacatcaatatgaatatgggaaatgctagaataacttacattgtgaaagggatgaagtattatattttaagataaattctaggggttaaaagttgttatattttgggacggagggagtattactcaggttaaacttgtgggccttgcataatgagtggcattagctgttagcatgctagcacgatgtgctcacaccacaccaccatcctggaagctcggacctaacctaccggctaattacacaacacatattatcttactattccaattcattcccttggaaggattgcaaagacgttctggtatactcctactaatctagggccattttggtttgatgccaaaatgtgccctatcaaattgttggcattttaaatagtagtttggctagtgtttggtttgctaacaaaatgtgcctataaggtacataagttgccaaaacatttggcactatcaaattttgcctatgatttggcattgccaatattttggcatggtagcaaaaccaaaccagcccctagtacacttatcttactgtttccaactcccaagaacgacactgactgggcatccattctcttgagacgcacaaatggagtactgtactcctactacagttgcaaagaaagaggaagaaaagatgaacaagaaaaaaacaatataatagggcccattagtaacagtagcctcaaagcctgccctgccatgcgtaatagcttaaccacagtggacagtaggactgtcaagacagccattagcattaattcttttggcaccttgtctttcggcagcatcctgatatctctgtccctgaaccactgcacacatgtggccctgtttagaagagtttttgacagctacaactcttcctaaatctctctactctttcgaagagtctggttttgattcagatactaaaggttataaactaaaaggaagaggctaaaaaaaattattttggtattcttactagttgcttatcaaaatcttcagctacttaaacatgatctataatgtctgtgaggaattttaggtttcgagaaggagaatcaggagaagcaagggaaaaaaaactaacttcttgtttttagtttattttttatcccataactacaacttgttaaaatctagagtgacaaattaaaccatttaagtgagcttttaatttaaaagaaacaacaaccgttagaagctctcgtgcagatcctcctaggccaccattgtttggccgaatacggataatacaccatacgacgtattaacaaaataataataatttatagataaaactgtcatatatgtgttcttaacgacttaaatactaatgataaaaaataaaatttgatgaaaaaaaaaatcaaaaatcaactttaaattttaacttctaaattcaaaatttaacaacaaatgctgaatgggggaaacaatgggagtctctctctctctggaccaggcggcgaaaggcgccgcggaaaagaagctgcaccaaccaaacacacctctttgcgttgcaattgcaaatgcacctgacctgcatctgcaattgcatggccaccgaccgggtcgtgcagtggtgccaccgccgctgatcttgtccgcctctcacagaatgcagttatatctgtctcctggacctgctttggcttcgcactcgcggctgtagcttttgtcagtcctatatatgcaaccattgtactgtgtagaggtgaaaacggatcggattcggatggatagtagtcataccatatcctataccatattttttaatcggattcggaggcggtacggataatgtgcggatgcggatgcggaacggattatttcgggtgtcggaaatgatgcggactcggtgcggactcggctcggaaacggatgaaaataatcggatgtgatatgtatatacaatcgatataacatcttatcatctgtgcaatgagcaacaatgaggtaccaatatcacaattcacatgactcatgaaagcaccaatcacatcataatataatgtcaagttgttaacattgatttgtcttctgtccaaaagcatgtaatcgacacatacagtattgacatcacgatatatcgcattcacataacacgcaagacataaaagtttcacaattgttagaaaaaacagtatcacataagacatagaagttccacacgtaagtcagggcgtcaggtggcggcgtgggaggactgaaagaagagaagtctcgataaaaaaattggttgacgcgacgtcgtttgagtcacggactgaactcctggatagattgatggataaggtggacatggatgggctgaatctttacacgatgaaaatgctcatgtcaaatgggccaaattgagtggttatatgggctgtgaaattcggattatccgccaaaacgtttatcggataatccgtttaaaatagcggataatccgtatccgccggatattaccgataccatatccgcatccgcatccgcatgcatctatccgcatccgcatccgcatccggacggatatctacagacccttaccatatcctcacttcggacggattcggagcggatcggatcggataatatccgctccgttttcacccctagtactgtgcacgctgcaatcttttgcagcagcaaacactcacaagttgtgcttccctgtactcttctggcctgaaagatacactgcttttctgttcgattaaaggcgtgttcagtttgatgccaaaattagggggtgtttgggagggacttatgtttttgagagtcccaaacacccccttaataactctgttagtttggtttgatacattatcagatttttgtgcagagttatgtgaataagttaagggaaaattatgcatctctaaagtatgttttctcataaattttatttcattgcttacactacttgttctaaactatttgttaagtttgtttataaaaatgtttaatttatctctacatgtagataacccatggcaattatccagtgaataatatgtttcaaacagggtaaaaaatttggcaataggagtattaaaatttggtaaggttgaagatagtagcaaaccaaatatgccctaaatcagtttctgcacttgtatttttcttattgcattcaggctcatataagctattaggaaaggttactatgtttttcttttattttagcaaaacgaccgatgattgaaggataagagggaagagataattaacctaacctaaccaagagtggacagaaagccagaaaggactaggagctcacatgcacctgtcatacttaaactaaggggtgaattccaaatgaccttaacaccaccttgtcctgaacaacagcccggacaaaaatggattctaaggctattttgttgtgatttgtaaaatcaatcacaatggattaataaattaataaccctcaaacaaaatggactcacacatccctagtataatggatgggcatcactggatgccattttggattaaacaaacaccatcatggacacagacatccatcccttccaggtatacaatctgcaacaatctgcagctacccttggcttcgcatactgccccctagctggagtattttgttccttgctttgtgccaagacaaaggcctctttgggggtattgcctgcctggtttcgttttcttgctctgaaaactccttttaaaaatttgcagatcagatgcatgcaagacaatagaagggttcacataa</dnaseqindica> 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