Difference between revisions of "Os06g0184300"

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(Created page with "{{JaponicaGene| GeneName = Os06g0184300| Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein| Version = NM_001063527.1 GI:115466785 GeneID:4...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0184300|
 
GeneName = Os06g0184300|

Revision as of 20:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0184300

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein

Version

NM_001063527.1 GI:115466785 GeneID:4340327

Length

5007 bp

Definition

Oryza sativa Japonica Group Os06g0184300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4212295..4217301

Sequence Coding Region

4212532..4212700,4212858..4212951,4213056..4213674,4213793..4213918,4214003..4214671
,4214912..4215037,4215124..4215450,4215550..4215722,4215830..4215940
,4216653..4216767,4217055..4217225

Expression

GEO Profiles:Os06g0184300

Genome Context

<gbrowseImage1> name=NC_008399:4212295..4217301 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4212295..4217301 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacgctgaaccccgacgcgggtgacagagcggcggcgggggcggcgcagggggtgggggtggcggcggggggcgagggggaggcgaggagggcggagaagggggaggtggtcggcggtgggctggatccggagctcagcgtcgccaggatctacctcgggagaattggtgctggcctgcaaaatcttgggaacacttgctacctgaactcggtgctgcaatgcttgacgtacacagaaccatttgcggcctatttgcagagcgggaagcacaagtcttcatgtcgtactgctggattttgtgcactatgtgctcttcaaaaccatgttaagactgctctacagtcaactggaaaaatagtgacgccatcacagattgtcaagaacttgcgctgcatctcccgtagtttccgcaattcaaggcaggaggatgcacatgagttaatggttaatttacttgaatccatgcataaatgttgtctaccttctggagtaccaagtgagtctcctagtgcatatgagaagagcttagttcacaaaatatttggtggccgcctaagaagtcaggtgaaatgcacacagtgctcacattgctccaacaaatttgatcctttcttggatctcagccttgatattggtaaggccacgtctctggtgagggcacttcaaaatttcactgcggaagagctcttagatgggggagaaaagcaatatcagtgccaacgctgcaggaaaaaggttgtagcaaagaaaaagtttacaattgataaggcgccatatgttctgacaattcatctgaagcgctttagccctttcaacccccgtgaaaagattgacaaaaaagttgattttcagccaatgctagacttgaagccatttattagcgactctaaaggcgcagattttaaatacagcctttatggtgttttggttcatgctggttggaacactcagtcaggccattattattgcttcgttcgaacttccagtggaatgtggcacaaccttgatgataaccaggtacgccaagtccgtgaggcagatgtattgagacagaaagcatatatgttattttatgtacgtgacagagttgggaatccgactccacgcaaggataatatcactgctaatatgccagccaggagaacaatacctgaaaagatctcaggtctgagtgatatgatccagagcggcgtaattgaagcaaaattgaacggttcctcgtctccttatggcgataagaggttgcacggcataagcaatgggaactcaatcaagacttcaagagagcattatttgaagaaagatggcaaaactgaagctcctaaagcctctgaaaacaatggcctggcttccacacagaaagcttctgcacctcaaattgatggtgctaccttatctgctcaatctaagcaaattacttcaactggtcacagagaggtatcttcatcagatcgatctgcatctcttacacatgtgattgtgaaccaagcagtggccatggttccgtcgcaggaattgcaaccaaaggttgatggcttaaccgatacctcttccctgggcaatggcaatgcgatattgtctgagcgaaataaacaaacatcccagcatcaaaatccattttctatgccagcttcccatggaaaggacacaggggcagggcttgctgcacaaactttcccaactaaggatgctattgtttcaaatggtgttgtacctagtagcagggatccaatttccagtgagaaggtgtgtggcttgcaaaaatccatcaagcaagatgacaaaacggtgaaagaacttcctataagtgagaacaatatagtatcaggacttgaacgagtcaacgccagaaaacagactagctctgaagtttccatgaaggtagctgcagctgattcgtgcaatagcaacacacctaaaagggtggatttgaagtcaaagaaacttgtgagatatccagtcatgaacatgtggcttgggcccagacaagttatgctaggttcactaaaggtacaaaagaaaaagaaatgcaatagaactagaagacggtctgtagtttgtgaggacatggccaatgccacttgttcaggtaacaacacaagcgagcagcaggcatcaacatcaacaacaacgtcgtctgaaactgtgcaatgtactcccagagggcggaaacgtgcctatgatagtgacagtcctaaaaataataaccagaagcaaaacaagcaagacgttattggagccgatactggtagtggtgaacttaacatggataagagaaatgttattagtgaaaccgctgctagtgctgagcttccgaagctgggtccaggctcttctgcaaatcaggaacattcaaggaacaatgttcatgcaaaattgggagttccccggcattttactgttctgacaagggacttggctgaagttactgttccatgctgggatgatgttgctgtgtcaaatgctgaggcaagagagtcaaaacattcagaaagcaagagcattggatatgtgttagatgaatgggacgaggagtatgaccgtggaaagaccaagaaaatcagaaattcaaaggaagactacggtggaccaaaccccttccaggaggaggccaactacatctcacagagaaacatgaaacagaggacctatcaacccaaatcctggaagaaacatgcccatgttagaagatga</cdnaseq>

Protein Sequence

<aaseq>METLNPDAGDRAAAGAAQGVGVAAGGEGEARRAEKGEVVGGGLD PELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFC ALCALQNHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKC CLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATS LVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPR EKIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMW HNLDDNQVRQVREADVLRQKAYMLFYVRDRVGNPTPRKDNITANMPARRTIPEKISGL SDMIQSGVIEAKLNGSSSPYGDKRLHGISNGNSIKTSREHYLKKDGKTEAPKASENNG LASTQKASAPQIDGATLSAQSKQITSTGHREVSSSDRSASLTHVIVNQAVAMVPSQEL QPKVDGLTDTSSLGNGNAILSERNKQTSQHQNPFSMPASHGKDTGAGLAAQTFPTKDA IVSNGVVPSSRDPISSEKVCGLQKSIKQDDKTVKELPISENNIVSGLERVNARKQTSS EVSMKVAAADSCNSNTPKRVDLKSKKLVRYPVMNMWLGPRQVMLGSLKVQKKKKCNRT RRRSVVCEDMANATCSGNNTSEQQASTSTTTSSETVQCTPRGRKRAYDSDSPKNNNQK QNKQDVIGADTGSGELNMDKRNVISETAASAELPKLGPGSSANQEHSRNNVHAKLGVP RHFTVLTRDLAEVTVPCWDDVAVSNAEARESKHSESKSIGYVLDEWDEEYDRGKTKKI RNSKEDYGGPNPFQEEANYISQRNMKQRTYQPKSWKKHAHVRR</aaseq>

Gene Sequence

<dnaseqindica>4602..4770#4351..4444#3628..4246#3384..3509#2631..3299#2265..2390#1852..2178#1580..1752#1362..1472#535..649#77..247#gctgcacaggaggatcgagttccacctcgcgaggaggtcgcactcggtggtggcggtcgggggaggcgggttccggatggagacgctgaaccccgacgcgggtgacagagcggcggcgggggcggcgcagggggtgggggtggcggcggggggcgagggggaggcgaggagggcggagaagggggaggtggtcggcggtgggctggatccggagctcagcgtcgccaggatctacctcgggagaattgtgagtgcacgaagctgtgtaattctgttggtgtatcttagaggccgcgattttgttaggggttttgggggtggagctgcaatgcgtggtgtttttaccacggaatctgtcgatttgtattagtttataaaatatggattagtagctgctttttttttggatcgtagctagtgtagtatctagttaacggttctggcatttatcggggttttagtatggtgggcgttttattattttgtaatttttcttcccgggttcttaaattggagtgctttgatgtgatgtagggtgctggcctgcaaaatcttgggaacacttgctacctgaactcggtgctgcaatgcttgacgtacacagaaccatttgcggcctatttgcagagcgggaagcacaagtcttcatgtaagtattgttacagttttcaaccggatgatttggcatgttgcatgagatgccaatgttatgatgttacttttgaacatgtaaattccacacctagtagtaactgaactgaagtgaatgttctttatgtcatacgataagttgagcctggaccttgaaatcaagttatatggctgcatgcttaagctatgctgatagcctaggctagtaattctgtaattgctgtataactgccctagataatgatacctacattgcaagaggctcaaggttattccttttacattactggaaaatttcaacacttcttcaggttgaatgttgtttaacccataaacaggtattgcccattaagaaattcgtgaaaaagttggtaattctatttcaaagtttagacccattagttgtgcatgcaataataaaacacttgaacaaagaggctgaaaaaggataagaatgataagaaggggagaatcctgcttataaagagtagttacgttggtcttccgtagaacaatatatgaggtatcgagtatgaactgatcatgccttttctagattggtgttgcaccaatatttctgcactatgtaacatgttctgtatgaactgcaagcatgttttctatggtctgtcatgttcaagtaagcatagagaaacacttaattttgcgacaagatatttctattgctaattcttttcccctttcttaaggtcgtactgctggattttgtgcactatgtgctcttcaaaaccatgttaagactgctctacagtcaactggaaaaatagtgacgccatcacagattgtcaagaacttgcgctgtatccttcaatgttctttagcttaactgagcacctattattgatttaaattttggacttctagtttttttaaagaaatggaattggaatctttgactacaaaataggcatctcccgtagtttccgcaattcaaggcaggaggatgcacatgagttaatggttaatttacttgaatccatgcataaatgttgtctaccttctggagtaccaagtgagtctcctagtgcatatgagaagagcttagttcacaaaatatttggtggccgcctaagaagtcaggtatgatctgtacattgttcagtaagactggagctggcaatttcatgggaagtcccaatttcatagtcatcactgcttggctatgtacatgtgccccaggtgaaatgcacacagtgctcacattgctccaacaaatttgatcctttcttggatctcagccttgatattggtaaggccacgtctctggtgagggcacttcaaaatttcactgcggaagagctcttagatgggggagaaaagcaatatcagtgccaacgctgcaggaaaaaggttgtagcaaagaaaaagtttacaattgataaggcgccatatgttctgacaattcatctgaagcgctttagccctttcaacccccgtgaaaagattgacaaaaaagttgattttcagccaatgctagacttgaagccatttattagcgactctaaagtgagtaatttggtttttaattctcaagatctacccatttggataaaatctgtttcaggtttaattcattattgttgtttttgtagggcgcagattttaaatacagcctttatggtgttttggttcatgctggttggaacactcagtcaggccattattattgcttcgttcgaacttccagtggaatgtggcacaaccttgatgataaccaggtctagcatgatatttgccattacgtgaagctttactgtttcatttttagttgatagttgatagtcatatcacaaccttccattagctgcttaattggctattttattttaatcttgcgcttggccatatgtatgtgagggagtacagtgactctagtgcatggtggatgctactttattcctctcgctaattcagcagactttagcttcccttgtactgatccttgtggacaacttcaggtacgccaagtccgtgaggcagatgtattgagacagaaagcatatatgttattttatgtacgtgacagagttgggaatccgactccacgcaaggataatatcactgctaatatgccagccaggagaacaatacctgaaaagatctcaggtctgagtgatatgatccagagcggcgtaattgaagcaaaattgaacggttcctcgtctccttatggcgataagaggttgcacggcataagcaatgggaactcaatcaagacttcaagagagcattatttgaagaaagatggcaaaactgaagctcctaaagcctctgaaaacaatggcctggcttccacacagaaagcttctgcacctcaaattgatggtgctaccttatctgctcaatctaagcaaattacttcaactggtcacagagaggtatcttcatcagatcgatctgcatctcttacacatgtgattgtgaaccaagcagtggccatggttccgtcgcaggaattgcaaccaaaggttgatggcttaaccgatacctcttccctgggcaatggcaatgcgatattgtctgagcgaaataaacaaacatcccagcatcaaaatccattttctatgccagcttcccatggaaaggacacaggggcagggcttgctgcacaaactttcccaactaaggtatgtttactcttatggtgatcactgctgattttttggtaatatttttgctatgtgacttgttttgttcattcaactctgcaggatgctattgtttcaaatggtgttgtacctagtagcagggatccaatttccagtgagaaggtgtgtggcttgcaaaaatccatcaagcaagatgacaaaacggtgaaagaacttcctataagtgaggtatggtaccattacccttattatgtgtcactatcccatatgatcctgtagacttttgattgaccccataaggttcatataggctgatttgtatattttgtttctggcttttgtgcagaacaatatagtatcaggacttgaacgagtcaacgccagaaaacagactagctctgaagtttccatgaaggtagctgcagctgattcgtgcaatagcaacacacctaaaagggtggatttgaagtcaaagaaacttgtgagatatccagtcatgaacatgtggcttgggcccagacaagttatgctaggttcactaaaggtacaaaagaaaaagaaatgcaatagaactagaagacggtctgtagtttgtgaggacatggccaatgccacttgttcaggtaacaacacaagcgagcagcaggcatcaacatcaacaacaacgtcgtctgaaactgtgcaatgtactcccagagggcggaaacgtgcctatgatagtgacagtcctaaaaataataaccagaagcaaaacaagcaagacgttattggagccgatactggtagtggtgaacttaacatggataagagaaatgttattagtgaaaccgctgctagtgctgagcttccgaagctgggtccaggctcttctgcaaatcaggaacattcaaggaacaatgttcatgcaaaattgggagttccccggcattttactgttctgacaagggacttggctgaagttactggttagttccatctctttgccctctacactttgtcatgcgctacaaatatgctagtttgccatctattttgtacctgccatattcttaccttttggccttttcagttccatgctgggatgatgttgctgtgtcaaatgctgaggcaagagagtcaaaacattcagaaagcaagagcattggatatgtgttagatgaatggtgagccattcttttaattcgtcgatgatacatctcagtattgttcagtggtgtttcatactttccaattctttggtgaaatttaagtagcgaataatctcattgaaggaaacgaataactatacgaaatctactgttcactttcatctatttccagggacgaggagtatgaccgtggaaagaccaagaaaatcagaaattcaaaggaagactacggtggaccaaaccccttccaggaggaggccaactacatctcacagagaaacatgaaacagaggacctatcaacccaaatcctggaagaaacatgcccatgttagaagatgacaatgacgattgacgatgcccatgttgtagtagcagtgtagcgcccatttttgaagaattcatttgttgttcgttttgccgtgttacatcttagcattccggacaaacagctgctgggactggacatgcattcaactgttgttttcgccatgtcgtatttaaacagctggaacctctgtattcaattgtattggattgttgtagcgagaacgagttggttaatactactgtcgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0184300, RefSeq:Os06g0184300