Difference between revisions of "Os09g0493500"

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(Created page with "{{JaponicaGene| GeneName = Os09g0493500| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001070080.1 GI:115479902 GeneID:4347447| Length = 3...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0493500|
 
GeneName = Os09g0493500|

Revision as of 21:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0493500

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001070080.1 GI:115479902 GeneID:4347447

Length

3424 bp

Definition

Oryza sativa Japonica Group Os09g0493500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19768491..19771914

Sequence Coding Region

19768702..19768852,19768975..19769167,19769325..19769487,19769584..19769774,19769886..19770059
,19770163..19770391

Expression

GEO Profiles:Os09g0493500

Genome Context

<gbrowseImage1> name=NC_008402:19768491..19771914 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19768491..19771914 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacaacatttcttggtcctcctcctctaggatatttctttgctgtgcttatatgagcaggttgatttgcttcagagttcaacatcatcacttccagtttgagaaaatggtgatctcatccaagggcaaagtgtgtgtaactggtgcttcaggcttcgtcgcctcttggctcatcaagaggcttcttgaggcgggctatcatgtgataggaactgtgagagacccaagcaatcgcgataaagtgtcacacctttggagattaccaagtgcaaaggagaggctgcaacttgtgagagctgatctgatggaagaagggagctttgacgatgctgtgatggcttgcgaaggcgtcttccacactgcatcgcctgtccttgccaaatctgattccaattgcaaggaagaaatgcttgttcctgcgataaatggtactctgaatgtgctgaaatcttgcaagaagaatccatttctgaaaagggttgttcttacatcctcatcatccacggtaagaatcagggatgagagtaaacatccagaaatctcactggatgaaacaatatggagctctgtggcactctgtgaaaagctacagctatggtatgccctggcaaagatatctgcagagaaagcggcatgggagtttgccaaggagaacaacattgaccttgtaactgttcttccatcatttgtgattgggcccagtttatcacatgaactgtctgtcactgcttcagacatccttggcttacttcaaggtgacacagatagattcatctcgtatgggagaatgggatatgttcacatcgacgatgtggcgagctgccacattctggtgtacgaagcacctcaggctactgggagatatctctgcaactccgttgttcttgacaacaacgaattagtcgccttgcttgcgaagcaatttccaatttttcccatcccaaggagcttgaggaacccatatgagaaacagtcatatgagctaaacacatccaagatccagcagctgggtttcaagttcaaaggggtgcaagagatgtttggtgattgtgtcgagtcgctgaaagatcagggacacttgctggagtgcccgttgtaa</cdnaseq>

Protein Sequence

<aaseq>MYNISWSSSSRIFLCCAYMSRLICFRVQHHHFQFEKMVISSKGK VCVTGASGFVASWLIKRLLEAGYHVIGTVRDPSNRDKVSHLWRLPSAKERLQLVRADL MEEGSFDDAVMACEGVFHTASPVLAKSDSNCKEEMLVPAINGTLNVLKSCKKNPFLKR VVLTSSSSTVRIRDESKHPEISLDETIWSSVALCEKLQLWYALAKISAEKAAWEFAKE NNIDLVTVLPSFVIGPSLSHELSVTASDILGLLQGDTDRFISYGRMGYVHIDDVASCH ILVYEAPQATGRYLCNSVVLDNNELVALLAKQFPIFPIPRSLRNPYEKQSYELNTSKI QQLGFKFKGVQEMFGDCVESLKDQGHLLECPL</aaseq>

Gene Sequence

<dnaseqindica>3063..3213#2748..2940#2428..2590#2141..2331#1856..2029#1524..1752#ttttagatttctaaaccgaatcttgttgcgagttcttctcctacccatccgcgtctcggggcttggaatcgaatcctcgccaagttcggatcaacgaactgccctcataagcccgcgtcccctccttcctcgcgtcgacgccgcaccgcaccgcatctccgctcgccgccgccgacgacgacgagatgctttcccggattctgcatggctatggaggacacggcgggagaggcttcgagcagacgtaccggtgctactcggcggcggccttcaacaagccgcagctcgaaggcggagacaaggtgatcatgccggcgtcggcgctccaccgcctcgcctccctccacatcgactacccgatgctgttcgagctctcccaccacggcgacgccgccgcccaccgggtcacccactgcggcgtgctggagttcgtcgccgacgagggcacggtgatcatgccgcggtggatgatgcgcggcatgcgcctcgacgacggcggcctcgtcgtcgtcaggagcgccagcctccccaagggcagctacgccaagctgcagcctcacaccggcgacttcctcgacacggcgaaccccaaggccgtcctggagaagacgctgcgcagcttcacctgcctcaccaccggcgacaccatcatggtggcctacaacaacaaggagttcctcatcgacatcgtcgagacgaagcccgcctcggccgtctgcatcatcgagacggattgcgaggtcgatttcgcacctccactcgattacaaagaacctgaaaaggttcagcagaaaccatctgttccttcaagcaaggcggcttccgaagatcaagatcaaatcaaagatgagccagaattcagagcattcactggttcagggaatcgtttggatggtaaggcctcaaaaccgctagcagcagggatctcttctaatcctgctgctgcaagttctgcaatttcagactcgaacaagaaggtgaatcaggagacagcagcatcaggagttagcaactctacacgtcagaaaaaggggaagcttgtttttggttcaaacaaaagcagcagcagcagcaaagaaccagagaaggctcctcctgttaaagttgatgaacttgcaaagaaggaagagcccaagttccaagcattttctgggacgagctactcgttgaaacgttagctgctgctattagggttaaaagttttggaatcaatcatttgtttcttacttggagttcgcctggttactctggcagctgtaaatgattggtagcaatgtgtatctttatcattttcagttctcccttaataattctagttattgtcttgctaattaaaagaattccgtggattacatggaacctgatactatttgcttgaccatatgtggagttttcttgcaatgtcaagcagaacgcattgctaatgtactcaaccaactccctacctagagaagattctaactgaatctaccctcaaccaacctgcttctccatcagttaattatgatcacaaaaatgaggtgatgtacaacatttcttggtcctcctcctctaggatatttctttgctgtgcttatatgagcaggttgatttgcttcagagttcaacatcatcacttccagtttgagaaaatggtgatctcatccaagggcaaagtgtgtgtaactggtgcttcaggcttcgtcgcctcttggctcatcaagaggcttcttgaggcgggctatcatgtgataggaactgtgagagacccaagtatgtgtagcatttttcttgattatgacagtgcatcagttcattactactattcacaactgtgagattaattatggtgtgtgtgttttggataatttaacaggcaatcgcgataaagtgtcacacctttggagattaccaagtgcaaaggagaggctgcaacttgtgagagctgatctgatggaagaagggagctttgacgatgctgtgatggcttgcgaaggcgtcttccacactgcatcgcctgtccttgccaaatctgattccaattgcaaggcatgataaaattacttccaatcttcggtttttatgatgcatctgaatgtttatttacctgaactgttatactacactctcactgcatggtgcatgctattactgttgcaggaagaaatgcttgttcctgcgataaatggtactctgaatgtgctgaaatcttgcaagaagaatccatttctgaaaagggttgttcttacatcctcatcatccacggtaagaatcagggatgagagtaaacatccagaaatctcactggatgaaacaatatggagctctgtggcactctgtgaaaagctacaggtgaaaagtccatttcggtttacagattatttgcaccttttgtgacccatataaacctttgatttaacaacgctactgatatttatgtgcatgaagctatggtatgccctggcaaagatatctgcagagaaagcggcatgggagtttgccaaggagaacaacattgaccttgtaactgttcttccatcatttgtgattgggcccagtttatcacatgaactgtctgtcactgcttcagacatccttggcttacttcaaggtatttcttgtttcttctggaatcactatttatctctgaaaggttgctgcaaataccgtttactcttctcttctactgtttttcttcaaactttaatctttcttagctactcagctaacgaaatgggttgctatttgccaatggaatgatcttgcaggtgacacagatagattcatctcgtatgggagaatgggatatgttcacatcgacgatgtggcgagctgccacattctggtgtacgaagcacctcaggctactgggagatatctctgcaactccgttgttcttgacaacaacgaattagtcgccttgcttgcgaagcaatttccaatttttcccatcccaaggaggtcagtcaattgaaacacttaaatcccttgcatctctgatgcttacaacttaattacaagcagttttgtttactgtatttttgtttactgaaactctcgtcttggaattaattgctgtgcagcttgaggaacccatatgagaaacagtcatatgagctaaacacatccaagatccagcagctgggtttcaagttcaaaggggtgcaagagatgtttggtgattgtgtcgagtcgctgaaagatcagggacacttgctggagtgcccgttgtaacgaaaaaaagggatctttggcacggtaccaacaagctcatggccaagcacacacttgaattgttctgactttgattcgacacttcgcatgccactgcgtttctcttgtaataattcgcatgtcattccctcaccaaacgacaaataaattgtcaatttgttgctcagtcttcacagaccatatgcttaaatgtaatgctctgcttgctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0493500, RefSeq:Os09g0493500