Difference between revisions of "Os06g0190800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0190800| Description = Ionotropic glutamate receptor family protein| Version = NM_001063560.1 GI:115466851 GeneID:4340363| Length = 4030 bp...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0190800|
 
GeneName = Os06g0190800|

Revision as of 20:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0190800

Description

Ionotropic glutamate receptor family protein

Version

NM_001063560.1 GI:115466851 GeneID:4340363

Length

4030 bp

Definition

Oryza sativa Japonica Group Os06g0190800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4592917..4596946

Sequence Coding Region

4593295..4593666,4593755..4594161,4594392..4594704,4594806..4595762

Expression

GEO Profiles:Os06g0190800

Genome Context

<gbrowseImage1> name=NC_008399:4592917..4596946 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4592917..4596946 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatgcagacgcgtgtcttcattgtccacatgttgccagcccgtgcttcccgcctctttgcaagggcaaaagcactcggtatgatgactaaagggtatgtctggattgtcacagatagcattggtattgtccttgatgtgcttccccaacattccattgaaagcatggagggaattgttggtttccggccatatattgcagaatctacaaggatcactgatttcagctctcgatttaccaccttattcagaactaagtaccatccaaatactgatattaggatggcaaaacccactatctttcaattatgggcttatgatgtggcatgggcagtcgcaacagcaactgagaaggttcataggaccagatctttgaacccaacttttcatcctccgggaaacataggcaagaacttagtagatgatctcccagcattgcctgctggtccagaactcctcaattccattttgcaaggagagtttgatggattggctggacaattcaggcttatcgatagacatctgcaggttcccacatatgagattgtcaatgttattggagagaaaactagagttatcgggttttatagtcctgattctggactcacaatgtctgtgaactctagaattatccatggtgatgctaaatttagcacaagttcttctgatctggaaaatatcgtttggcctggagattcaacaacagtgcccaaaggctgggacttcccagtgaatgctaagatactccagattggtgtgccagtgagacgtgattttaaaacttttgtgaatgttgagactaatccgaacacgaatagatcaactgtcagtggctacagcattgatatgtttgaggcagctgtcaagaaattaccgtatgctctacgctacgagtacattccctatgattgtgctgtttcatatgacctgctagtatcccaggtcttttacaagaagtttgatgcagcagtcggtgatgtgacaattattgctaaccgaactagatatgtagatttcacaatgccatacacagagtctggtgtttcgatgcttgttctatctaagagtgacgatgaaccaaccacatggatcttcctacagccactagcaaaggacctatggattgccactatgatctttatcttcttcacaggcctagttgtatgggtgattgaaagacctataaatcgcgatttccaagggtcaaaatggaaacagtgcatcactgctttctactttgcattctccactttgactttttcacatggtcaaaagatccaaagcattcagtcaaaaattgttgtggtaatttggtgcttagttttgatgattctggtgcagagctatacagcaagtttgtcatcaatgctaacggcagagaggctccaaccttcagtgactgatctaaaacaacttttggccaatggtgattctgttggacaccaaagtggatcatttgtgcaatcaattctgaagaagcttaaatttgatgaccacaagataaaggtttatagcacgcaggaggaatatgcaaaagcattaaggatgggatcaaagcatggaggggtttcggctatcttcgatgagataccctatctaaattctttctgctcgaaatacgggagggagttccagatggttggccccattgacagaacaagtggatttggttttgttttacctaaaggctctccattggtaccagacctttcagaggccatcttgagcttaacggaagaacctgaaaggttgaagattgaaaagacatggttcatggattcgtccttggattattatggcagtcacagcaaaggctcatcacgtatcagttttcagagcttccaaggtcttttcatcattgtcgggtgccttttaggtgctgtgctgttgataaactttagcaagtttctatatgacaaatgcaaagagatgagaggcttcggttcagaccgtgtccatagtggcgagagagttgtttgttacggtgaagctcaaccacaaccaccgcagattgtcatggtcgatcgacgatcctgtgcctgctga</cdnaseq>

Protein Sequence

<aaseq>MTMQTRVFIVHMLPARASRLFARAKALGMMTKGYVWIVTDSIGI VLDVLPQHSIESMEGIVGFRPYIAESTRITDFSSRFTTLFRTKYHPNTDIRMAKPTIF QLWAYDVAWAVATATEKVHRTRSLNPTFHPPGNIGKNLVDDLPALPAGPELLNSILQG EFDGLAGQFRLIDRHLQVPTYEIVNVIGEKTRVIGFYSPDSGLTMSVNSRIIHGDAKF STSSSDLENIVWPGDSTTVPKGWDFPVNAKILQIGVPVRRDFKTFVNVETNPNTNRST VSGYSIDMFEAAVKKLPYALRYEYIPYDCAVSYDLLVSQVFYKKFDAAVGDVTIIANR TRYVDFTMPYTESGVSMLVLSKSDDEPTTWIFLQPLAKDLWIATMIFIFFTGLVVWVI ERPINRDFQGSKWKQCITAFYFAFSTLTFSHGQKIQSIQSKIVVVIWCLVLMILVQSY TASLSSMLTAERLQPSVTDLKQLLANGDSVGHQSGSFVQSILKKLKFDDHKIKVYSTQ EEYAKALRMGSKHGGVSAIFDEIPYLNSFCSKYGREFQMVGPIDRTSGFGFVLPKGSP LVPDLSEAILSLTEEPERLKIEKTWFMDSSLDYYGSHSKGSSRISFQSFQGLFIIVGC LLGAVLLINFSKFLYDKCKEMRGFGSDRVHSGERVVCYGEAQPQPPQIVMVDRRSCAC </aaseq>

Gene Sequence

<dnaseqindica>3281..3652#2786..3192#2243..2555#1185..2141#gcgataacgcgaactcgcgaaggaagacgagagagagagagagagagagagagagagagagaggagagaggcagtcgccgccgtccgccccttcagctcgccgctgattttggtcgctggggaaggagaggagtgatctgatgggattcactcgcgggggccgtgtagaagtcgacttgattcggaggggatcgggagatcggagtcatggtcggaggcagcgattggcgaaggagggaggatccaggcaccgattttgagcggaatcgtctgttcgctgcgctggtatgagctcccgcgaaacctgattgagccaaccaaatccaaacagttttcagttggatctgttactgaaccgtaccctgtcttagatttaatccatcgatccaggtagattgctttgcttcagtgattatgtcatgaactagttgcaactaattgtaaatcgaaagcgatcaattagttccttgaacttgggaagtaaatctgggcctgttggtgaggttagatcgttcttgctgttcatcaggcagtaaatctggctaagatgtagcatagcttgttttctagtagaatggaaccgttggaataaaatgctagtatatgggtagaatgagaaagatttgcacatgttggttaaggtgttacatgttcttcaaattttgctattgatttatttcttctatgtgctatcttggagtgttcgatgtaaggaaagggttatacagcatatattttgcacagttggcatatgtattgaacattgaactgatcattcttttatatatcctgcagcaatagatctcatcaggaatgaaaatgttgccattgttattggtcctcagagcactttacaagcagaatttgtgacctacctagcgaacaagaccaaggttcctgtcatcactttctctgcaaccggtgatgcagtcactcggtaccatgtcccgtacttcattcgtgcttgttccaaggactcctatcaggtggcctccattgctgcattcgtcaaagcctatgaatggagaaatgttgttcttgtctatgaagacaacaattatggtgttggcatcctcccttccattaccgatgctcttcaaggtgtcggggttaatgtcattaaccgttctgccttccctgcttattcccccaataaccatatagatgtggaactatacaagctcatgaccatgcagacgcgtgtcttcattgtccacatgttgccagcccgtgcttcccgcctctttgcaagggcaaaagcactcggtatgatgactaaagggtatgtctggattgtcacagatagcattggtattgtccttgatgtgcttccccaacattccattgaaagcatggagggaattgttggtttccggccatatattgcagaatctacaaggatcactgatttcagctctcgatttaccaccttattcagaactaagtaccatccaaatactgatattaggatggcaaaacccactatctttcaattatgggcttatgatgtggcatgggcagtcgcaacagcaactgagaaggttcataggaccagatctttgaacccaacttttcatcctccgggaaacataggcaagaacttagtagatgatctcccagcattgcctgctggtccagaactcctcaattccattttgcaaggagagtttgatggattggctggacaattcaggcttatcgatagacatctgcaggttcccacatatgagattgtcaatgttattggagagaaaactagagttatcgggttttatagtcctgattctggactcacaatgtctgtgaactctagaattatccatggtgatgctaaatttagcacaagttcttctgatctggaaaatatcgtttggcctggagattcaacaacagtgcccaaaggctgggacttcccagtgaatgctaagatactccagattggtgtgccagtgagacgtgattttaaaacttttgtgaatgttgagactaatccgaacacgaatagatcaactgtcagtggctacagcattgatatgtttgaggcagctgtcaagaaattaccgtatgctctacgctacgagtacattccctatgattgtgctgtttcatatgacctgctagtatcccaggtcttttacaaggtgagctctgcttattttgtattcttaactaattttcccttgtgaataaactcattattactaatttacttgttgcctttccgtttccctgggtgcaacagaagtttgatgcagcagtcggtgatgtgacaattattgctaaccgaactagatatgtagatttcacaatgccatacacagagtctggtgtttcgatgcttgttctatctaagagtgacgatgaaccaaccacatggatcttcctacagccactagcaaaggacctatggattgccactatgatctttatcttcttcacaggcctagttgtatgggtgattgaaagacctataaatcgcgatttccaagggtcaaaatggaaacagtgcatcactgctttctactttgcattctccactttgactttttcacatggtatgtcattacagacctagctattgaatagataaaatacataactacatacatcttcgtacattcaacttattaatttctaaggatgcttttttttattgttttttgtcgggtcagctgaaagactcttaaggatgctatcatatgctactgtgattcagtatttgctgtaatttgttttgatactactatgatttttgataatctattttttttaatcctatggacaggtcaaaagatccaaagcattcagtcaaaaattgttgtggtaatttggtgcttagttttgatgattctggtgcagagctatacagcaagtttgtcatcaatgctaacggcagagaggctccaaccttcagtgactgatctaaaacaacttttggccaatggtgattctgttggacaccaaagtggatcatttgtgcaatcaattctgaagaagcttaaatttgatgaccacaagataaaggtttatagcacgcaggaggaatatgcaaaagcattaaggatgggatcaaagcatggaggggtttcggctatcttcgatgagataccctatctaaattctttctgctcgaaatacgggagggagttccagatggttggccccattgacagaacaagtggatttggttttgtaagcttcttgcacttgttatttattagtataatgcatcttcgagcattctgccttggctttacaatatatgtttacttttcgacaggttttacctaaaggctctccattggtaccagacctttcagaggccatcttgagcttaacggaagaacctgaaaggttgaagattgaaaagacatggttcatggattcgtccttggattattatggcagtcacagcaaaggctcatcacgtatcagttttcagagcttccaaggtcttttcatcattgtcgggtgccttttaggtgctgtgctgttgataaactttagcaagtttctatatgacaaatgcaaagagatgagaggcttcggttcagaccgtgtccatagtggcgagagagttgtttgttacggtgaagctcaaccacaaccaccgcagattgtcatggtcgatcgacgatcctgtgcctgctgataccctccagattaggactgaaaacaaataaagagtgtgaacagttatctgcaccaactatcccaactcccaaggcactagaatggctctgaagctagaaaaaagttcacttgttttggcctgcttgttgcatggccttgcttaactgtgtaagcctcttctgttggttttaattagtcaattgaaagctattctaaaactctagatttgcaataattgtaatgataattgtaatgtagcacaaacatgctgaacgatgttcagttgatgtttttcttttcttgggacaaaactcaattgtaagctattctaaaagaactctagattgacaatgattgtaatatagcacaaacacgacgaacgaagtttttcttgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0190800, RefSeq:Os06g0190800