Difference between revisions of "Os06g0192600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0192600| Description = 26S proteasome regulatory particle triple-A ATPase subunit1 (26S protease regulatory subunit 7)| Version = NM_0010635...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0192600|
 
GeneName = Os06g0192600|

Revision as of 20:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0192600

Description

26S proteasome regulatory particle triple-A ATPase subunit1 (26S protease regulatory subunit 7)

Version

NM_001063572.2 GI:297605349 GeneID:4340376

Length

3137 bp

Definition

Oryza sativa Japonica Group Os06g0192600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4666493..4669629

Sequence Coding Region

4666606..4666692,4667226..4667307,4667420..4667511,4667625..4667702,4667819..4667880
,4668456..4669177,4669299..4669456

Expression

GEO Profiles:Os06g0192600

Genome Context

<gbrowseImage1> name=NC_008399:4666493..4669629 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4666493..4669629 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgacgaggacgacatcgccctcctcaagacctacggtcttggaccttactcgaccagcattaagaaggttgagaaggaaatcaaagagatggcgaagaagataaatgatctctgtggaattaaagagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatgatgcaggaggagcaacccctgcaggttgcaagatgcacaaagatcatcagccctaacacggacgatgctaaatatgtcatcaatgtcaagcaaattgcgaagtttgtggttgggttgggcgacaaggtctcccccactgatatcgaggaaggaatgcgggttggagttgatcgaaacaagtaccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtggaagaaaaaccagatgtgacttacaatgatgttggtggatgcaaggagcagattgagaagatgcgtgaggtggttgagcttcctatgcttcacccagaaaagtttgtcaaacttggtatcgatcctcctaagggagtactgtgttatggccctcctggaactgggaaaacacttcttgctagggcagtggccaaccgcacggatgcttgctttattcgagtcataggaagtgagctagttcagaagtatgttggtgagggggcccgcatggttcgggaactcttccaaatggcacgatcgaagaaggcttgcattgtcttctttgatgaagtcgatgccatcggtggtgctcgctttgacgatggtgttggtggtgacaatgaggtccagcgcactatgcttgagattgttaatcagcttgatggatttgatgccaggggaaacatcaaggtcctcatggccaccaacaggcccgataccttggaccctgcattactacgtccagggcgtctggacaggaaagttgagtttggcctgccagacctggagggccggacccagatcttcaagatccacactcgcaccatgaactgcgagcgggacatccggtttgagctgctcgctcgcctctgccccaactccactggggccgacatacggagtgtgtgcacggaggctggcatgtacgccatccgcgctcgcaggaagacggtgacagagaaggatttcttggacgcggtgaataaggtgatcaagggttaccaaaagttcagcgcaacgcccaagtatatggtgtacaactag</cdnaseq>

Protein Sequence

<aaseq>MAPEPEDDIMNEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKE IKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTDDA KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV EFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRA RRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN</aaseq>

Gene Sequence

<dnaseqindica>114..200#734..815#928..1019#1133..1210#1327..1388#1964..2685#2807..2964#aagtaaacccaaagccgccaactgcttctctcgccgccgccgccgccgccgccgccgctcaccgtcgccggagaagagggcaggaggaggaggaggaggaggaggggggagccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgacgaggacgacatcgccctcctcaagacctacgtgagtgccccgcagatcggatcgatccccctctcgtcttctcctcctagggtggaaattcttcggccgatctgagcttgattcacgggttagggtccccttgttccgtagccatggagtcgcgctcgtggtagatctagggttttcgatctctcgtgctcgcgttactacctgccgcactcgttggcgacaactatcatgattttgtgcagagaatcagttcttccgcatgctcaggatgaaattcgtttagttggatttcggtacatagccatagctctgtgaaacctagtccatcagatattttctctgcatattcatctcctttctgttgcattttcctctctataaagagcttcacttcaggttgcactagttagttagttagttcccacttttctttatcccgcaattagcgtgtgcgataggaccctaaaacattcatctcattgtataattttgctaaattctgccgtgttaatttaggcatctagctgaatttgctaattttatactggtctattgcttaacagggtcttggaccttactcgaccagcattaagaaggttgagaaggaaatcaaagagatggcgaagaagataaatgatctctgtggtgtgtgctcgtcaaattctttgcttctcaatttaaatataactgtgctacaggtgcttgcgctattccaacttgctgcaacatgctcatctgaactgttaatgaattgcaggaattaaagagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatgatgcaggaggagcaacccctgcaggtaatgcttgacgttcacctaactgactttttggttttattgcattcaaatgcatactgtcaatattccctgtgcttcctcatgccttctactaataagcgtccttctgcaaggttgcaagatgcacaaagatcatcagccctaacacggacgatgctaaatatgtcatcaatgtcaagcaaattgcgaaggtgagtcatgcttttattacttgccagcctttctctgtggaggttcatataaaaaagagtacttctggaggtttatcgctgattttctctgatattttatctatgggacattgcagtttgtggttgggttgggcgacaaggtctcccccactgatatcgaggaaggaatgcgggttgggtaggtttctttctcactctatagcatgtcctattatctttacttcaactgtgcttgaaagaaattatgcttaccatcagttcattcgacacatagtgctaggagcatactgtttaaaaaccaagctgtaacatattaaattgataaccatgctagttctagtggcaaatctgtagtgctgatatgatgagatgaaaagtcagtatttgctaagaagcattttgagataataactaccattgaagttttttagcacaagataaaatatgctactttatggtagttatcgttgcagcaaggagcaatattgctgtctgttccattcttgatgccattaagctttggccatatgcaccacttagtgatgcattcttccatatatcatataaaaaagtgtcatttgactagttcctaaactcttttgatcaaatttgatgggagaattagaaataatagtaagcacatcctttttctgttccacatatgttgtttgcattgcacttgtgtgatgctgttcttgaagtaattatattatcaattggattgtattgtttctcatcctgtgtatcatacagagttgatcgaaacaagtaccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtggaagaaaaaccagatgtgacttacaatgatgttggtggatgcaaggagcagattgagaagatgcgtgaggtggttgagcttcctatgcttcacccagaaaagtttgtcaaacttggtatcgatcctcctaagggagtactgtgttatggccctcctggaactgggaaaacacttcttgctagggcagtggccaaccgcacggatgcttgctttattcgagtcataggaagtgagctagttcagaagtatgttggtgagggggcccgcatggttcgggaactcttccaaatggcacgatcgaagaaggcttgcattgtcttctttgatgaagtcgatgccatcggtggtgctcgctttgacgatggtgttggtggtgacaatgaggtccagcgcactatgcttgagattgttaatcagcttgatggatttgatgccaggggaaacatcaaggtcctcatggccaccaacaggcccgataccttggaccctgcattactacgtccagggcgtctggacaggaaagttgagtttggcctgccagacctggagggccggacccagatcttcaagatccacactcgcaccatgaactgcgagcgggacatccggtttgagctgctcgctcgcctctgccccaactccactggtaagtgccgggaattcttgcatgacagaatccagtctctggctagtttctgttccatgtcatttatctttaacctccttttttttttctcacgtttggctatttgtgtttgttggaacaggggccgacatacggagtgtgtgcacggaggctggcatgtacgccatccgcgctcgcaggaagacggtgacagagaaggatttcttggacgcggtgaataaggtgatcaagggttaccaaaagttcagcgcaacgcccaagtatatggtgtacaactagagggcactgaccttgatttcccgtttcttcctgtgcccctcctttggaccttcagaaagattgagcctgtttgtttccctttcttactcaaaagaaacctgggctgttttctgcatcatatgacacgctgggataatcttatctttagaatattgaaagatcacaatgggagg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0192600, RefSeq:Os06g0192600