Difference between revisions of "Os06g0215300"

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(Created page with "{{JaponicaGene| GeneName = Os06g0215300| Description = TolB, C-terminal domain containing protein| Version = NM_001063672.1 GI:115467075 GeneID:4340482| Length = 7311 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0215300|
 
GeneName = Os06g0215300|

Revision as of 20:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0215300

Description

TolB, C-terminal domain containing protein

Version

NM_001063672.1 GI:115467075 GeneID:4340482

Length

7311 bp

Definition

Oryza sativa Japonica Group Os06g0215300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5861287..5868597

Sequence Coding Region

5861428..5861541,5861642..5861746,5862517..5862608,5862709..5862778,5863264..5863386
,5863471..5863556,5863731..5863832,5864058..5864280,5864401..5864466
,5864591..5864681,5864758..5864885,5865096..5865151,5865851..5865933
,5866355..5866502,5866624..5866695,5866770..5866874,5867306..5867475
,5868277..5868494

Expression

GEO Profiles:Os06g0215300

Genome Context

<gbrowseImage1> name=NC_008399:5861287..5868597 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5861287..5868597 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctcctcctcctcctccaccaccgcggcctcccccgccgctgccgccgccgacggtggcggtaccggcgagaagcccgtggcggcgccgtacggatcctggaggtcgcccatcaccgccgatgttgtctccggcgccgacaagcggctgggagggatcgccctcgccggtgacgggcgcctcctctggatcgagggccggcccgaggagaaagggcgtatggttatagtcaaggaggatgataagcctgtggatatcatacctcaagaatttgcagcacgtactctagctcaagaatatggaggtggtgcattttcagtcaaagataatgttgttgtgttctcaaactacaaggatcaacgtctgtacaagcaaagtactaaaactggtgtgcctgtgcctcttacacccgattatggtgggcctgatgtcagttatgctgatggagtctttgatcctcacttcagccgttatgttaccgtgatagaagaccgtcgaaagagtagcttgaatcccaccacaacaatcgcagctataagcttgagtaatggggttgttcaggaaccaaaggtgctgattagtggcaatgacttctatgcttttcctcgtattgaccataataacaagcgtatggcatggatagagtggagtcatccaaatatgccctgggataagtcagaactttgggttggctacttctctgaaagcggagacttgaccaaacgggtctgtgttgctggtagcaatccaatgttagtggagtccccaactgagcctaaatggtctccaaaaggcgaattgtttttcctaactgatagagggagtggattttggaacatctataaatgggttgagcacaccaacgaggttatttcagtttacacgctagatgctgagttcacaaggccattgtgggtttttggtatcagctcttatggttttcttggtgaaagcaatcacattgttttcagctacaggcagcatggaaggtcatatcttggtgttctggactctgatataggttctgtttcattgcttgacacccccttcactgatttatccaatgtggttactggaaatgattacttctatattgaaggtgcatctgcaactgttccaatgtcaatcgcaaaggtagctttaaatgaggacagaacaaaagtagttagtttctcaataatttggtcatcctcatcagatgttgtacaatatagttctttcttcagtgcaccagaatttgttgagttttcaacatccagcaccggccagaaagcttatgcatatttctacccaccttcaaacccaaattttcaaggtttgccagacgaaaaacctccattgcttgtcaaaacacatggaggaccaacagcagaaacacgtggaattctggacctgagtgttcagtattggacaagtcgaggatgggcatatcttgatgttaactatgggggaagcactggttttgggagggagtatcgagagaggctattggggaaatggggtatcgtcgatgttgatgattgttgcagctgtgcaagagtcctggtggagagtgggaaagtagatgagcgacgcctttgtattactgggcgatcagcaggtgggtacactacgttagcttcactcgcattcagggacacattcaaggctggagcttctttgtatggtattggtgacttatctttgttgagagcagagacacacaaattcgagtctcactatactgacaatcttgtaggaaatgaaaatgcttactatgagagatcaccgatcaactttgttgacaaatttacatgtccagttattttgtttcaaggcttggatgataaggtagtcccaccagatcaggcacgcaaaatatacaaggccttaaaagagaaaggtttgcctgttgccttggtggaatacgaaggagagcagcatggtttccgcaaggctgagaacatcaagtttactttggagcagcagatggtgttctttgctcgattagtcgggaattttaaggtggcagatgatataactccaatcaagatcgaaaactttgactga</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSTTAASPAAAAADGGGTGEKPVAAPYGSWRSPITADVV SGADKRLGGIALAGDGRLLWIEGRPEEKGRMVIVKEDDKPVDIIPQEFAARTLAQEYG GGAFSVKDNVVVFSNYKDQRLYKQSTKTGVPVPLTPDYGGPDVSYADGVFDPHFSRYV TVIEDRRKSSLNPTTTIAAISLSNGVVQEPKVLISGNDFYAFPRIDHNNKRMAWIEWS HPNMPWDKSELWVGYFSESGDLTKRVCVAGSNPMLVESPTEPKWSPKGELFFLTDRGS GFWNIYKWVEHTNEVISVYTLDAEFTRPLWVFGISSYGFLGESNHIVFSYRQHGRSYL GVLDSDIGSVSLLDTPFTDLSNVVTGNDYFYIEGASATVPMSIAKVALNEDRTKVVSF SIIWSSSSDVVQYSSFFSAPEFVEFSTSSTGQKAYAYFYPPSNPNFQGLPDEKPPLLV KTHGGPTAETRGILDLSVQYWTSRGWAYLDVNYGGSTGFGREYRERLLGKWGIVDVDD CCSCARVLVESGKVDERRLCITGRSAGGYTTLASLAFRDTFKAGASLYGIGDLSLLRA ETHKFESHYTDNLVGNENAYYERSPINFVDKFTCPVILFQGLDDKVVPPDQARKIYKA LKEKGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARLVGNFKVADDITPIKIENF D</aaseq>

Gene Sequence

<dnaseqindica>7057..7170#6852..6956#5990..6081#5820..5889#5212..5334#5042..5127#4766..4867#4318..4540#4132..4197#3917..4007#3713..3840#3447..3502#2665..2747#2096..2243#1903..1974#1724..1828#1123..1292#104..321#tctcgcctccatctcacccgcacgcctctccgcctccgcctcccacctcctccgcgcgctgccccgcatccgcctccgccgcccgctcgcgtcggcgccccgcatgtcctcctcctcctcctccaccaccgcggcctcccccgccgctgccgccgccgacggtggcggtaccggcgagaagcccgtggcggcgccgtacggatcctggaggtcgcccatcaccgccgatgttgtctccggcgccgacaagcggctgggagggatcgccctcgccggtgacgggcgcctcctctggatcgagggccggcccgaggagaaagggtaagttaaccagtaaccgccgttcctgagcttataacagttataaataatttttttcctccaaatattttggtaatagcattggcagctactactacacttttttttacggaagtttgtatggtgccttaattatacgttaaggcacatgaagattctgattctcttttgtgtcttggtggcctcgagctattgtgattgttggtctcgagctgttgtgatgtttgttactagtttcttagtaagtgtgcgtatctagattctggaattgttttagtagcatgttggcacatatttgcgtggagattgtatcatagaaactggaaggaataatgtgatttcgtttcactatgtttttttttttaattattggaattttagtttctcagcagattactggtatgatttttctgcatataaatgaaagcaagttacagctttgcactagaatacatggtcaaatgaatgattggcttatgggctttgacaattagagttgattgaatatgcaaatttgagaaacccagaatgtattttatatgcatttgctgtgtgtgcattactgcactagagacaacatgatgccagaagattaatgtaatataataaattctttctgcctggcaattgctaattccatgaatttctagcagtgtgcaattaaataattgatggttgcaataactgtgttaagtttgttaatgtctgttattagtgtaccatgtcatgttcaacttttaatagttccctgttatgctgtgtcactcggaattaatttatcttcaaccatattggacacaggcgtatggttatagtcaaggaggatgataagcctgtggatatcatacctcaagaatttgcagcacgtactctagctcaagaatatggaggtggtgcattttcagtcaaagataatgttgttgtgttctcaaactacaaggatcaacgtctgtacaagcaaagtactaaaagtgagtcatttgctatggttgtaggactaaggagttaggtgaacctaactgaattagcatgtcaataaagaaatataatttagttggaaggatgtgtttttactttccttacttatggtaattctttgtctagtacttcattgaaaaatatttcattgtgtatatgcatttataggttactgtatagcatgctcattcaaataagtagaattggtggagcatgtcttaacaagcgaaaagacttgcgtttataatgaaatgacagccagtgaaatgataggttgtgtttgacaggattaaaaaggaaatctaatcacactattcagctgttaaatatttagaaccacttaatgcttgatgatcaatatgcatattaaataatgatatttttttctgctgaaatatttcacatgatgattttcccttgtcagctggtgtgcctgtgcctcttacacccgattatggtgggcctgatgtcagttatgctgatggagtctttgatcctcacttcagccgttatgttaccgtgatagaaggttaattggcatatgattttattacaaactatagttgcatactgaacttctgacatgctcaaatttcttgatagaccgtcgaaagagtagcttgaatcccaccacaacaatcgcagctataagcttgagtaatggggttgttcagggtaagactatacgaaatgtttataactttcacaaagttaaatctatgtgtgcgtgttgcttgtaattttctcatatctgctttttttgtaagaattcttactttttttttctgtattgaagaaccaaaggtgctgattagtggcaatgacttctatgcttttcctcgtattgaccataataacaagcgtatggcatggatagagtggagtcatccaaatatgccctgggataagtcagaactttgggttggctacttctctgaaagcgggtaagcaacattatctttagaaatgcatattagaacatgctgcctttttcttccaatcaggtaatataaacaaaacaaatgttacattcgggatgacagaaatttagatggatccattatctttttcttggttcataatacatgctagcccttctacaggaatcatttgatggtacactttaataaactttgagtgtccctaaggaaccctatctctaatgcatggaatatatatataaagaagttagtctgactacagaggaatatctcataatactaaaaacttttggatttattttctgttgtaatctctagtgttgcagtctgtctaccttatgctagtccattttcgacctgtttctgatttttttttcaactgttagctttttatgattaagcacccatgattctttgtttgtagagacttgaccaaacgggtctgtgttgctggtagcaatccaatgttagtggagtccccaactgagcctaaatggtctccaaaaggtgtcatgttgcttgttaattttgtctgattatctgaaacatgttgcatatttatttgttacttgagtgagaaagccgttatatgtttgtaatatgtttgtttatttatttatttatttattatgcctgtatgtttgtaggaattcaaacatatttgcatgagaagattatacaaatgtaacattgtgaagcagtacctaccatatcttgctctttctttaggcatgcatattcacatttttaattgactctaatactgaacgccagaagatggaatcaatactattctaccgagatgttacatcatgatttctgtcagtattgctctaaaaaaaatgttcatgttagtcttacagtatttgctgtgtggattatttccttgagtggtttcaactagatggtctagcatagttcatatccacgatgtacaattgtcttatttaagcaaaaaatgttatctttggtatggaaggtgttcttagctcggccagctacttgtatttattattgttcccgagccttttcttcacaatcacagtgattaaattcgttggttccataacccattaacccctttgcaactttagcaatagcaatttatttgcttggcagtgatgcgactattgatttatcatgattataatcatcctgcttgcaactctgctaccaaagattcgtctaattcatatgaacttgcaggcgaattgtttttcctaactgatagagggagtggattttggaacatctataaatgggtaattagttttctcttaatccttgaacttcttcatttaacatttgaagtatcttttgtcctgattttgtttgacttctctactttttagttggaacttgtaagtaatgacttcaatgatcatggctcattgcatgatcaaatacagcattcttggtcatcatctggattttgtttgacatacattgccaatgcacttgtttgtcatcaggttgagcacaccaacgaggttatttcagtttacacgctagatgctgagttcacaaggccattgtgggtttttggtatcagctcttatggttttcttggtgaaagcaatcacattgttttcagctacaggtttttattgtactgttatacttctgttgatgaaaatatattaaaaattccatcacaatacctatatgtcacacaggcagcatggaaggtcatatcttggtgttctggactctgatataggttctgtttcattgcttgacacccccttcactgatttatccaatgtggtaagcatcgtattcggcatcacttttatttgaaaaaactgtactatccatattctgccttgtttagttccgttctagagtggttatgataacttacctctagtcctctactatggtgtgccaggttactggaaatgattacttctatattgaaggtgcatctgcaactgttccaatgtcaatcgcaaaggtttctaggatctcacatccagatttctgctttgttgatgatgtgttggtgcctcttttttttttcattttagaactttttgtgtatcaactatgaagcatcatattctgtttctttcaggtagctttaaatgaggacagaacaaaagtagttagtttctcaataatttggtcatcctcatcagatgttgtacaatatagttctttcttcagtgcaccagaatttgttgagttttcaacatccagcaccggccagaaagcttatgcatatttctacccaccttcaaacccaaattttcaaggtttgccagacgaaaaacctccattgcttgtcaaaacacatggtaagtaaattattgaagccttgtgatgcctcagaatatctttgtagtttgatcccagaaaataattattcagttatttaggcccaactgttatgtgttctgttttgtatttacaatttttactatgtggtttctgtctaatttggttcgttaggttattgcatccttcttttccatgatcacaatcatggcaatcgcatatttgatattccccacatctttcaggaggaccaacagcagaaacacgtggaattctggacctgagtgttcagtattggacaagtcgaggatgggcatatcttgatgttaactatgggggaagcactggtttgtccttttagcttccactgtttggacttttggttgcacctttatgtacaatgttgggagcttgttttctttttctgctaattcatgtcgtagttgatttaataaaggctctaggttatttaaatctttagttttatcactgaatttaactgtagtataatataactgaaggttttgggagggagtatcgagagaggctattggggaaatggggtatcgtcgatgttgatgattgttgcagctgtgcaagagtcctggtacatcctagtagtaatggttgtaattatataatagcatttcattatagtaatgctaacaaaacaccttaatgcattttttaggtggagagtgggaaagtagatgagcgacgcctttgtattactgggcgatcagcaggtgggtacactacgttagcttcactcgcattcagggacacattcaaggctggagcttctttgtatggtgtaagttatatatctttctaggattctgcttttttggctttcctataaatgtacataacaaagaacaatgggggctgcaggttctagatttcttgtgattgtttttaagtaatagttactttttacacatcaattgcattatcttttagaaaataattggcgatatgatccttttcttagtccatatccaagatgggaatattcaagaatatttttcagcccagtgcacaacgttgtaggatctgtttttcacagatataactaagaatttaacaaacttgatttataacgtgaaattgaggtattaaatcactacttgcatttgtatgataggtaatttgatatggaaaactgataaaaagattaaagtgcagttcacagagtggtccacctttgtaacgtcaatcatttttgtctctacatagacataagaactattgagcagattgttgacttgtcatttttattaccatattaatgagcagattggtgacttatctttgttgagagcagagacacacaaattcgagtctcactatactgacaatcttgtaggtaagaccataagagtctcactatttctgctttggtaaaagtattcaatccaacccgtatgtccaatgtaatagtcaccttttgctacattgctcttcaggaaatgaaaatgcttactatgagagatcaccgatcaactttgttgacaaatttacatgtccagttattttgtttcaaggcttggatgataaggtatgtgatgattgcggaggatcaactattttagacaagtcatgtttgtcagtgtatagttgtataacatgtcaaagtgttacatgcggtgaaaatttactgtatgaggtatgctccgctgttacacttgcacccttgaatagagatcaatatctagcagaacagcagacaagctaatgtgggactcttgaatcgagcttttattttctgtttattagattatccgcttctgtcagatcatcaattcatcatattttagttcctcctatagttaactaatggtttttcctaaaccatcctctggtactcattagtcttacagatttattacaggagtattagatctaagacaagtaataagtttcatgttcacatgttatttgctttttttttttattaattttcataactcacctggagaagcaagggtcactttctaggtacttataacttagagttaaagatttttttttttaaaaaaaaatacttctatattgtgtagttgagcctttttctcatcattcctgcaatatttccttgtgaaacatttcctatgagttcataaaccggaagtttctatgttggtctcatgcatagtcatgataactgaggaattactgatgcataattgcctctcatcattcctgcaatatttccttgtgaaacatttcctatgagctcataatcatgataaccgagaaattaatggtgcataattgcaactgtaaagtgcaaacaatttcatctgcttcaattcattttcattccaggtagtcccaccagatcaggcacgcaaaatatacaaggccttaaaagagaaaggtttgcctgttgccttggtggaatacgaaggagagcagcatggtttccgcaaggtaccaaactgtatcacttgtctctctatagtctcaagtctctttacaccctaaaccctgcgataaggttgtgatggagtatgctcttccatttgaacaggctgagaacatcaagtttactttggagcagcagatggtgttctttgctcgattagtcgggaattttaaggtggcagatgatataactccaatcaagatcgaaaactttgactgatcgctcgaagaaagtgtagcagtagcttacatttcgtggaacatgacctcttacagtttgcatctgtttgaattgtccatgtactccgactaaatgttcattaaaatcaatcaatgttggagtctggggcaatggaatcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0215300, RefSeq:Os06g0215300