Difference between revisions of "Os06g0225800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0225800| Description = Shikimate kinase domain containing protein| Version = NM_001063734.2 GI:297605426 GeneID:4340547| Length = 2586 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0225800|
 
GeneName = Os06g0225800|

Revision as of 20:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0225800

Description

Shikimate kinase domain containing protein

Version

NM_001063734.2 GI:297605426 GeneID:4340547

Length

2586 bp

Definition

Oryza sativa Japonica Group Os06g0225800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6494213..6496798

Sequence Coding Region

6494213..6494317,6494439..6494503,6494645..6494723,6494948..6495077,6495171..6495253
,6495420..6495580,6495699..6495753,6495877..6495923,6496600..6496798

Expression

GEO Profiles:Os06g0225800

Genome Context

<gbrowseImage1> name=NC_008399:6494213..6496798 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6494213..6496798 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggctagagcggggctggcgatgcagtcgcgggcggctgtcggggtcggagctggccccggcgtggggcggcggggccgcgccgtgatccgcgtggggaagcggccaaccgcggcgagcctgcgggtcggaggccccgccggaccggcggcggccaagcccctcgccccgctgtactgcctcaaggcgtccagaggccacgacagcttgcataactcagttgatgaagccctcctgttaaagaggaaatcagaagaagttctattctacttgaacggacggtgtatttatttagttggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgagagtagtgtcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgccgttattcggccagttaactggaaatatatgaagaaaggtctatctgtctggctggatgtgcctttggatgcacttgcaaggcgtattgctcaagtgggtactgcctctcgtcctcttctggatcagccatcgagtgatccatacacagcggccttctcaaaactcagcatgcttgcagagcaaagaggcgatgcttatgcaaatgctgatgctcgagtttctcttgaagaaattgcagctaaacaaggccatgacgatgtctccaaactaacaccgaccgatattgctattgaggccttactcaagattgagaatttcgtcaccgagcattccacatcaagtggcccagttggggacttaatagttgattcccagaatcgaaggacaaaggccttgtag</cdnaseq>

Protein Sequence

<aaseq>MEARAGLAMQSRAAVGVGAGPGVGRRGRAVIRVGKRPTAASLRV GGPAGPAAAKPLAPLYCLKASRGHDSLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGM MGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRD LSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQP SSDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALL KIENFVTEHSTSSGPVGDLIVDSQNRRTKAL</aaseq>

Gene Sequence

<dnaseqindica>2482..2586#2296..2360#2076..2154#1722..1851#1546..1628#1219..1379#1046..1100#876..922#1..199#atggaggctagagcggggctggcgatgcagtcgcgggcggctgtcggggtcggagctggccccggcgtggggcggcggggccgcgccgtgatccgcgtggggaagcggccaaccgcggcgagcctgcgggtcggaggccccgccggaccggcggcggccaagcccctcgccccgctgtactgcctcaaggcgtccagaggtgattcatctgttttttttttcttcttttttttttaactcccttgcagcgggcgattccggggttgtgctcgtgcgagcacggtgtcgttagggttaactttggcgcgattttgtccgggatttttttctcttcgagcggatgcggatccctctggtatggtattcagtgtggatatatgggttcgtcgtggtagccagatttttgcagttttttaattggattgggggaagtggtcactttcgtggtgatctggagtaaatgtgacaacttatgtgttggaaatggagttgttcagggtaggtgatggctttgctgggtcaaataggaaagttggatggggcaatttcaatgaagctctctctctctctttgttaggtgggttggaaggggttaaatttcagtttgtagaagtgtgtattgttacatgtttttcttggtatcaacctgctatttacttcaaaaatggtcaacattttgtaacaaatacactactacaaataacctctgatgatcacaccaacgttggattgtctatgcaccttgtatcatttcttgttgtgatttcttacccgatgtagtcttctattttaggtagttgcctgacgagatgtatatgctaaattttgcttgtgttcagctgaaataactttctttgtaatcttgtatcgtacaggccacgacagcttgcataactcagttgatgaagccctcctgttaaaggtaaataacgctttacaaaaattcctactattagttaaatcaagagtaaaatatggctagaactttgttctctcatctttggctttcggccattggtataatgttttctaattgtaattgcagaggaaatcagaagaagttctattctacttgaacggacggtgtatttatttagttggttagttctgaacctgtatcatttaattgttaacctgtaactggagactaaataccaagttaaatataacttgatcttatttgaaaatgaaattaataatattgagtacgtattgtaggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgaggcaatgtttcttttctgaattatgtttccctgttgacaacatgacactgttatttttcagatagtttctatttttttgtagtgatttgaatggaaagatttgtggagtaacaatttctcagacatgatagactaacaattccatggttccctgctttgtctaacagagtagtgtcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgccgttattcggccagttaactggtattgggattaatctgatctcacgcccatcctcttgtaaatttggctttttctgtttatggataataagtgaaagctcttgtgttttttcaggaaatatatgaagaaaggtctatctgtctggctggatgtgcctttggatgcacttgcaaggcgtattgctcaagtgggtactgcctctcgtcctcttctggatcagccatcgagtgatccatacacagcggtagttactctctatccttgaaactaatcgtttgtacattcacaagacagatgctttcttaactagaagataacagtcttcatgtgaaaacaccaatcagcgttagtgcttatagaccttgtagcttttgaacttgcatgtatttcatttaccatcttcattttgtctttctgcatggttgtgctcattaaaatggatggctcatggaattgtttgttccccaggccttctcaaaactcagcatgcttgcagagcaaagaggcgatgcttatgcaaatgctgatgctcgagtttctcttgaaggtatgtttcttttctgacatgtccttcatcttaatatgctcctagtttgctgatagcagatggatatctagtgtcgcttcagcgaagcttttcatgtatccaacagagaataatacagtctgcattattttacctctgcagaaattgcagctaaacaaggccatgacgatgtctccaaactaacaccgaccgatattgctattgaggtattgcacatttcgggacaattattcatgtaaacttgtcatttcatctctctttgtaaggacgtctcatactctgcccgattgaatttttttcctaacataacatcctgttgcatttcaggccttactcaagattgagaatttcgtcaccgagcattccacatcaagtggcccagttggggacttaatagttgattcccagaatcgaaggacaaaggccttgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0225800, RefSeq:Os06g0225800