Difference between revisions of "Os06g0268700"

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(Created page with "{{JaponicaGene| GeneName = Os06g0268700| Description = Peptidase A1, pepsin family protein| Version = NM_001063888.1 GI:115467507 GeneID:4340719| Length = 3963 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0268700|
 
GeneName = Os06g0268700|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0268700

Description

Peptidase A1, pepsin family protein

Version

NM_001063888.1 GI:115467507 GeneID:4340719

Length

3963 bp

Definition

Oryza sativa Japonica Group Os06g0268700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8954692..8958654

Sequence Coding Region

8954768..8955237,8955921..8956038,8956214..8956437,8956536..8956772,8957306..8957459
,8957540..8957622,8957757..8957871,8958021..8958093,8958189..8958331

Expression

GEO Profiles:Os06g0268700

Genome Context

<gbrowseImage1> name=NC_008399:8954692..8958654 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8954692..8958654 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcacgcctcctcgccgcgcgcccatggcgtggtggtgatcgcggtcgccccggaccacgacgacgacagcggcaagaaggggtggcgtctcgccgccgccgccgcccccgccttcggggacgaggcggggttcggggtggaggaagaggaggaggagggggaggaggaggaggaggaggtgaggtggagggagcggcgggtggcgtcgctgtggcgcgtggccggggcgctgctggtggtcgcggcgctcgcggtggcggggcactactgcctgtaccacgacccggcggcgttctcgcgggaggaggggaggtcgtcgttcttgctgccgctgtacccgaagtccagcgggggcggcgcggcgggggagtcggccggtagcgtcaagccggacggcgccggcgcggaggcgagggagaattcgtcggcgctgctcccgatcagaggcaatgtgttccccgacgggcaatattacacttctatgtacattgggaatcctccaagaccttattttcttgatgttgataccggaagcgacttgacatggatacagtgtgatgcaccctgcacaaactgtgcaaagggacctcatcctctgtataagcctgagaaaccaaatgtggttcctccgagagattcatattgtcaagaactgcagggcaaccagaactatggtgacactagcaagcaatgtgactatgagatcacttatgccgatcggagctcctctatgggaatccttgcaagggacaacatgcaactgatcactgcagacggtgaaagggaaaatttggacttcgtatttgggtgtggatatgatcagcaaggaaatcttttgtcgtcgccagcaaacactgatgggatcctgggcttgagcaatgcagcaataagccttcctacccagctagccagccaagggataatttccaatgtttttggccattgcatcgcggcagatcccagcaatggtggatatatgtttcttggtgacgattacgttcctagatggggaatgacatggatgcctatcagaaatggtccagagaacctatacagcacagaagtccagaaagtgaactatggagatcagcagcttaatgtgcgacgaaaggcagggaagttaactcaagtgatatttgacagtgggagctcatatacgtatttaccacacgacgactacacaaacctgattgcttcacttaaaagtctctctccaagccttttacaagatgagtcggatcgaacactaccgttctgcatgaaacccaattttccagtgaggtctatggatgatgtgaaacacctgttcaaacccttgagtctggtattcaaaaaaagattgttcatcttgccaaggacattcgttatcccccctgaggactacttaatcatcagtgataagaacaatatctgcctaggagtgttggatggaacagagattggtcatgactcagcgatagtaatcggagatgtttcccttcgaggaaagctagttgtatataacaatgatgagaagcagataggatgggttcagtcagactgtgccaagccacagaaacaaagtggatttcctttcctctttaaaagagtgctgcaaaatcaacttttgtaa</cdnaseq>

Protein Sequence

<aaseq>MEHASSPRAHGVVVIAVAPDHDDDSGKKGWRLAAAAAPAFGDEA GFGVEEEEEEGEEEEEEVRWRERRVASLWRVAGALLVVAALAVAGHYCLYHDPAAFSR EEGRSSFLLPLYPKSSGGGAAGESAGSVKPDGAGAEARENSSALLPIRGNVFPDGQYY TSMYIGNPPRPYFLDVDTGSDLTWIQCDAPCTNCAKGPHPLYKPEKPNVVPPRDSYCQ ELQGNQNYGDTSKQCDYEITYADRSSSMGILARDNMQLITADGERENLDFVFGCGYDQ QGNLLSSPANTDGILGLSNAAISLPTQLASQGIISNVFGHCIAADPSNGGYMFLGDDY VPRWGMTWMPIRNGPENLYSTEVQKVNYGDQQLNVRRKAGKLTQVIFDSGSSYTYLPH DDYTNLIASLKSLSPSLLQDESDRTLPFCMKPNFPVRSMDDVKHLFKPLSLVFKKRLF ILPRTFVIPPEDYLIISDKNNICLGVLDGTEIGHDSAIVIGDVSLRGKLVVYNNDEKQ IGWVQSDCAKPQKQSGFPFLFKRVLQNQLL</aaseq>

Gene Sequence

<dnaseqindica>77..546#1230..1347#1523..1746#1845..2081#2615..2768#2849..2931#3066..3180#3330..3402#3498..3640#gccgcgactcccaaacctttcgatcatctcttcgacttcgtcggagtcggagtccgagtccaccgcctcgccggagatggagcacgcctcctcgccgcgcgcccatggcgtggtggtgatcgcggtcgccccggaccacgacgacgacagcggcaagaaggggtggcgtctcgccgccgccgccgcccccgccttcggggacgaggcggggttcggggtggaggaagaggaggaggagggggaggaggaggaggaggaggtgaggtggagggagcggcgggtggcgtcgctgtggcgcgtggccggggcgctgctggtggtcgcggcgctcgcggtggcggggcactactgcctgtaccacgacccggcggcgttctcgcgggaggaggggaggtcgtcgttcttgctgccgctgtacccgaagtccagcgggggcggcgcggcgggggagtcggccggtagcgtcaagccggacggcgccggcgcggaggcgagggagaattcgtcggcgctgctcccgatcagaggcaatgtgttccccgacgggtgcgtgcagccggtgcaagaactcgattccatttcgtatgaaacagtagagttttgatcctttctctcttccgaagaacaaattactggagttctttttcgcgatcggatgctggttggtcatgattcctttttattgggcggggttattcatctattcttgctttaggtagaatttcggattcttttgagtttgatttgaggtggatttttttttggtttaacctgcttgggctttggaaaaggtagaactacggtgactcgagtttcttggaaaaagttgatggtttgatttattacctgttcttttacaacaatgatttcacatgaaacagttgaaatttttaaataaatttggaaacattcctgctttcctacatctctgtcctgtcactttgattgggatgttttgactgtcatatcaaattgcatataagtcttgactatacaaattgtctgtttatactagtatttatttgtgattagtttaagttgaagtaggaaggcttctaatgtgctggctcatgggtcaacgtttgatgttcatattcttctttctctttgtatgatatgtttaatctttggcagttcatgttcattgatgttacctaccagaatgcagtgaattgcaaatactaacatggaattggtgcccttctgggtattctgcttttaatctgcaggcaatattacacttctatgtacattgggaatcctccaagaccttattttcttgatgttgataccggaagcgacttgacatggatacagtgtgatgcaccctgcacaaactgtgcaaaggtatgctccaaattcaatcactttctttttttttgtcctgtttttaatttggctttttagctttattagaatgagtttaagttagcatggatatcttatttcaccatcttattatgagtctaaatttcccaatttcattgtgtgtttgtgtaatgatcatccaacgttgttgcagggacctcatcctctgtataagcctgagaaaccaaatgtggttcctccgagagattcatattgtcaagaactgcagggcaaccagaactatggtgacactagcaagcaatgtgactatgagatcacttatgccgatcggagctcctctatgggaatccttgcaagggacaacatgcaactgatcactgcagacggtgaaagggaaaatttggacttcgtatttgggtatgacttgatttccgataactaattctctgaaatttgtgaagatgggatgctcttttctgaatggtaaccatctgccatctgtgtaccatctgcaggtgtggatatgatcagcaaggaaatcttttgtcgtcgccagcaaacactgatgggatcctgggcttgagcaatgcagcaataagccttcctacccagctagccagccaagggataatttccaatgtttttggccattgcatcgcggcagatcccagcaatggtggatatatgtttcttggtgacgattacgttcctagatggggaatgacatggatgcctatcagaaatggtccagagtaagtcccatccttttgtttgtgaaagtttcattacttttcccttggatactatgcatcatttttactagatataatatgctctgtctgcaaaagatcttgagaaatcctaaccaactcttgtcaccctcaagactgaaagtacaggggaaattttgcccaactgctctttgatataatatttttaactttttgcagttttgcactgatgctagatatagatttattttttttacactagtaatagtaatcgcattgatgattcgatcatacttccaagaaatgtcatgaaacttatcacaaaaaaaaaaaagaaatgtcatgaaactggcaaaatgctctgcatattatcactcttataattcacctaatctttttgctgtaaaagatggggcgagcctatatgttcagatgtcagaaaattagcataagttccagcaaaaataaagaaatgatgccatacgaggctggtatttccttttagcattgatatgatctatgtaactgaaacttgtcccttttcattctgtcaggaacctatacagcacagaagtccagaaagtgaactatggagatcagcagcttaatgtgcgacgaaaggcagggaagttaactcaagtgatatttgacagtgggagctcatatacgtatttaccacacgacgactacacaaacctgattgcttcagtgagtgcctctattaattcccttacatatggagccagttcaatctcatcttactcatgtttacttgcaatttttaacagcttaaaagtctctctccaagccttttacaagatgagtcggatcgaacactaccgttctgcatgaaacccaattttccagtgaggtaacgtgttgaaactatacgtccaaaataaaataagtgttgaaactactcatgtgctaaagagggcaaatttccaatgtccagttccagataaataaacacacagttcttaaacaatcctctgcatttttcaggtctatggatgatgtgaaacacctgttcaaacccttgagtctggtattcaaaaaaagattgttcatcttgccaaggacattcgttatcccccctgaggactacttaatcatcagtgtaagtttccatgatcaactttcatatttatcaaacgtccaattaaattttggacatctacagcaatattccctcgaaaattttcaacaaggagagcaaagccataccataagtcattcatcatgtttttctctggaatctttttacaggataagaacaatatctgcctaggagtgttggatggaacagagattggtcatgactcagcgatagtaatcggaggtatccatctgacattttcctttggtacatttctgttgccgaattcactcactgtagtttctaaacttgcatttgcttgctgtttattttttcagatgtttcccttcgaggaaagctagttgtatataacaatgatgagaagcagataggatgggttcagtcagactgtgccaagccacagaaacaaagtggatttcctttcctctttaaaagagtgctgcaaaatcaacttttgtaaatgtcacatagaaattgaaatttaccaccagctcgactgaccatgctttacttttggacgtgcaaattctacgttcaaagctgccataatcaatatcagtgaaagtaattaaacaggacatagggtaaaaagaagatgtaagtagagatagccagtaagtatgttgtacttagtaatttgtctcttctgtatacacaaagaagcagaattatgtatatgtattttgtagaatatatctcaaccacctgtaaagagtatatctcatccacttgtaagactaagtggtgaagcatatatcagtgaagccatggcatttctcgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0268700, RefSeq:Os06g0268700