Difference between revisions of "Os06g0273800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0273800| Description = Similar to Signal peptidase 18 subunit (Fragment)| Version = NM_001063906.1 GI:115467543 GeneID:4340738| Length = 52...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0273800|
 
GeneName = Os06g0273800|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0273800

Description

Similar to Signal peptidase 18 subunit (Fragment)

Version

NM_001063906.1 GI:115467543 GeneID:4340738

Length

5257 bp

Definition

Oryza sativa Japonica Group Os06g0273800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9255962..9261218

Sequence Coding Region

9256691..9256741,9256955..9257012,9257104..9257191,9257346..9257391,9257488..9257523
,9257622..9257693,9258130..9258242,9259969..9260047

Expression

GEO Profiles:Os06g0273800

Genome Context

<gbrowseImage1> name=NC_008399:9255962..9261218 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9255962..9261218 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtgctggcgcaaatcatcagcttaggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaatgttgatggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatattatggggcgagctgttggttttctgccatatgttggatgggttacaattatcatgactgagaagccaattattaagtaccttctgatcggcgcgctgggcctactggttataacatcaaaggagtaa</cdnaseq>

Protein Sequence

<aaseq>MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVT GSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVH ERQESAEVDILTKGDNNFGDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEK PIIKYLLIGALGLLVITSKE</aaseq>

Gene Sequence

<dnaseqindica>4478..4528#4207..4264#4028..4115#3828..3873#3696..3731#3526..3597#2977..3089#1172..1250#aagcgaagcatattcctccgtcttctccccgcccgggtgtcgctctcctcctcgtcgccgtcgccggtcgtcgccggtcgcgggtggcgcgcaacccggagtctctgccggctgcttactcgccgcgggcttcagcttcctcctcgatctccggcgcgcctccaagctgcagatcggccgacccccccaggtgcgccctcccccagaaaaagtcctccccccccccccccccccccgcgcgaccccgcaactccccctcctccgcatcctaccggatcctctctcaccggccgacgccacctcgcctcgctcccagccgccgccgccgacgagcgccactgccaaagccctagatcgaagcgaagcagagggccttgcctcgccctctccactcaggatttgtaccgctcgcattcgcatcgcgcgctcatgacctggagttcatgttgtggaagtagacgcatcgtagcaagcaccacccacgcgttggcttgcccccgtatctgcggttgattgattcctgttgggttcggttggtgtttgctcagattcgaggtgacaacgtaccagcagtgaagaaaaaacattgcgaagaagtgatcctcgttgcaccaagagtgtaaataatcttttgatcagctcctagaacaaacaataatcacatgtgttggtcccatgggcagaactagaaaatcaatccaaccaagatgagttcatgattgctcattctttcgtgcgtcagataaatcaagctgcatacttgggtaaaagaagatcatgtgctcaacatcttattgttctgctagcagttgtgttgaatcttcctatgattggccgaaacgtattatgaagctcctgatgcttctgctctcccagttgttggtaaagaaagtgatgctgttggtttggctagctgtctagttccttccagtttcttttgttcctagcatgggcaacagtagtcagcaatcatatcaaaattagatgaaatgcttgttacttgttgagacattgagatataatggattatggagatattactccatatgacataaatacatattaattatggacatctatttccagttttctctaatacttttttgtttttctgcagtgtgttgaagcctgcccttgacacttagcaactgcagagtcctgctggagagagatggggttcatcggcgacacgatagagtcaatccgctcgatgcaggtccgccaggtgctggcgcaaatcatcagcttaggtgcaaccttgcctcttttgcctcagtgattattttgctcacagataagtggattgggtccactacttcttgatttaggcttgggtatttaccttgtgattccaggagagtttctttgggagtggtctattcttagttctgttgggtttgatttcgctggtaacgctggggtagggaagtcttttgggattcttgatctagttctatgagctctattaactattccctctgatccatattataagacttttgggtttgtcccaagtcaaactactttaagtttgactaaacttttataaaaacatagcaacatttataacaccaaattagtttaattaaatccactattgaattgtagtatatttgatttgtgttggaaatgctgctatacttttctatgaagttggtaaaacttaaagaagtttgtcttaggacaaacccaaaacatcttataatatggaatggagggagtagatttttctaaggaatcatacggatctgggtaacaaaaatggattcgggaaacaactcttgtttaatgttaactgtaaaaatatgcatgttttatagaggaatcttttcacatatgagtgggttttaaccttagaaacttcttattccttttttttaaagctagggcatcagggcccccatttccattaccagaaatgagatagtgctacaagttcttgctgagttacttaagcctagaaaacaaaaagcgaaaggaagataaagaaggaaaaacaaaagggtctagggttacagtttaagatctgaaggatctcccggcatgacagcaaaatattcagcaaaacacacaactattcctattcagcagtgcacaccacaggacccatctttcacttgatgtctttagccctctagtcttatgatccccgtcccccaaccgaatttggagttgaaaatgtcacttgccacttgccttattaatctggcccccagcagaagtttttctcgatttgcctccaatgtctgcaacacagcccaggtttaaatccagtgacaagtcagaaaaactacctcagtagggtcttttgggagtttattctcaaaacaagcattgctcctaaatttccaaatggcccaaataactgcagccacccctacaaccactgagtgtttcatgttcttctcaaaaccattcaaccattgcggcattgcccaaacaggtgttgtatactcacaccaagtttcagattgagtgcattaattactacattccaaatcaatttggccattggacagttaaagaacaagtgttgaattgattcttcctcattacaaaactgacaaaagatcgagttacaaaatgtgatattaggcaaaaggagcacatagaatttactcactctgtcccacaaagcttcaccttttgccttcttcatttgccccacaaagacttcatctttgaagcagtcagtgcattttggagtttgagaaaaaaagagggacatatgcattgaagtttgacaaagtgcggaacgaatacattagagttctgagaaagtgaagggtattatggtctttttggttttatattggtatgtgtgagataggctaaaaatgaattctttttgggacggaggtagtactgcttagtatgtttttatcagttaggttagacttctgctgctcttatgttatatatatttattgttgatgcaacagcatatatgatagcttcaaatgtttctcttggcaggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagtgaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaagagtaagttgcttccttagacaatataagagccatattatacttatatttgtgcattcgcaatctttggtctttacatacggggatttacagtaatatttgttttttgtgcatacgctgaatttctcagttataagggacaaatctaaatttcagaagttccatctgcaacaaataaaaaagggaatttcctttttttaataagataggacgatatatggtttcctgtaatttatattggtttgcaaatggtgaacaaatgccttgttgccttattttacattccttaaaacttcgggttcattcatttcccaaaattttctttaaacagcaatttattcccatctgtgttcaactttcaccaagaagtcactttttaccctttaatgcactgtatgcatttagcattgttcatgaatgaattgttatctgctttcagggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaatgttgatgtaagtcttactgaaacattgtacattgtacatcatgaatttactgtatttctatatctcattgtattgtatttggctgttttctgctttctatgtagggccgtgaaattccaattgttcaccgtgtgatcaaggtaataaatttcaagtcattatattatcccatttgtttcagatgtcttttatgatctttcccctatacaatggagcttatcattctcttggtataggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggtatccatcattttctatttgaacaccataagtttctcaccagtggttatagtggtgactggtaaagcattggcagtagtaatcacctgctaacaatgtataacataccgtggatacagcaatgtttgtttgtaactgatgagctgcctttcaggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttcagcaacatcatattatggggcgagctgttgggtgagtgtcctcgactttgacaacacttatgtgccttcacacttaatgaaatatattttgcctgatcttatgttttgttatgcgagaacagttttctgccatatgttggatgggttacaattatcatgactgagaagccaattattaaggtatgctcatcctttctcagtatactgattgaccttgagattaaacaatgaatgcctgttcataggcgacaatttgttccgtcatataactcttcgctccttctctctatcaatgatagcacaaaaattaagcagtaccattgcagctcgataggtctcttaaaacttgggaagcatttctgactgactgatatacgatttctcttgctgcagtaccttctgatcggcgcgctgggcctactggttataacatcaaaggagtaataaagatgcggcttttcagtagagtagtggcctctctagtcgcatggaagaagctggtatttgtttcaccatgtttccaatggaagatgcgaggggtttatttttaggataactgtgcgacaattggcattgtattttccagcggtttatcatgtggcatccatctttcagtggtttacagttaattgcgcaagaaaatttaacgtgacttttggttcggcaactggttattggatgctgactttgatacaatataagatgaattcataaagcaatcctttgaggcaagtagaatcgaacctggctaagcctttttccatggatttgttggagtcttgactcttgagtgctaaatccctttcttggttaccaactgctattcagcggcagttcttttcactattgtatctgtcttctcaatccaaactatgctgaagtctgatcactgaatagcagcgcggctgtgatggttcattgaatactttgttgaatgctagtagctcatgtgccataaagccctaacagaatactggtgagatctcaacatgcacatatatgcttgtacttgtgtgagattgaggcaaatatttctgtgtatagtaagtatatgtgaaaaggagaactcgagccatattatagatctccagcccattaaatcgtatccagaatattgatatggtgttgtctttttggataaaagaagttcgtttggacgtggtctcttttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0273800, RefSeq:Os06g0273800