Difference between revisions of "Os06g0318200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0318200| Description = BTB domain containing protein| Version = NM_001064036.1 GI:115467803 GeneID:4340880| Length = 2448 bp| Definition =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0318200|
 
GeneName = Os06g0318200|

Revision as of 20:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0318200

Description

BTB domain containing protein

Version

NM_001064036.1 GI:115467803 GeneID:4340880

Length

2448 bp

Definition

Oryza sativa Japonica Group Os06g0318200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12386392..12388839

Sequence Coding Region

12386472..12386985,12387327..12388071,12388154..12388190,12388287..12388420,12388502..12388829

Expression

GEO Profiles:Os06g0318200

Genome Context

<gbrowseImage1> name=NC_008399:12386392..12388839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12386392..12388839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccgcccgcggcagcagcacgagccggagcatctcggcggcggcggcatcgacgtcgaggtcgagctcgacccggaggacctccagccgtcggtgcccctcaagaaggtccccgcgggggacctcttcgaggcggcccgcgcgggggactgcgcccgcctcgccctcctcctcggcggcggcgccaacgtcaacgagcgcgaccgctgggactccgtcgcgctctactacgcctgcctcgccggccacgccgacgccgcccggatgctgctcgaggccggggccgtctgcgccgagcgcaccttcgacggcgaccgctgccactacgccgcgctcaacctccgcctccggaggctgctcaaggcgttcgaggccaggcccccgccgctgccgccgctccccgccgcgctcagggccacgttcctcgcctgccccgccaaccgcgccgccttcctcgagatgctccagtggaccgccggctccgaagccgccgccctcgccgctgctgctggatttgggccaacggacaatccatcaagtactagcctattccctccggacattacattctacgtggatggaaaaccaattgaagctcatcgggtcattctttgtgcccggtcatccttctttcggaggaaattcaatacagactggaaagacaggaaggaagtgagattttctagccagaagttatcttttggtgccttgtacagccttgtccatttcttctattctgatagactcgaagtggatgtggatgatatggaaaatttggcgcgggcgtgcaaagtttgtaagtgtgagggtttgcaaaagatattgattaaagaagctactctccagagatatgcagaacacaagtcaccgagagatttggacagttcacagaagaggttcattttacatgggcaatccttgccagaggaggatcgccttccatcagccctgcggcatatttttgaggaatgtctagctaactcaagagaacaagaatgttataacgatgaatcaaatgaaatgagcagagactctggtgtagatgctgctgctgatctttatataaaagtatgtgataaggttttccattgccatcaggtgattttagcctcaagatcagagtactttaaagctaggctatctagaaacatggattttcttgaagtcaagagtgggcttcaatcaactcagagccttccttttcttgaagagcatgacatgagtacagaagcatttgaaaaggtgcttgaatacatgtatactgataacctagagcatatggatcctaatcaggctgaagaactatttgatattgcttcgagatacctgctattcccccttaaacgagttgtggcagatatacttttgccttatctggagcatgtttcacctgcagaactatgccactggctaatgttatcagacatttatgatgttgtgaaaataagggagtattgcttggatatcatcgcttgcaattttgagatgtttgcggacacaagagagttcagggcattgcttttgacacttccaccaccatctggagatgactcactgcgaacaactcgtcccagtgaacctggtactgcaggcaacactgaccaaggcaaccttcttgatgatttgcgtgagaaatggttagaagcagaggctgctgagctagacgagagagatgagagtgcaaagctgtttgacaaccgattggaaatgcttatgcttgtagcagaacaagaagccaatgatggcaatgtttga</cdnaseq>

Protein Sequence

<aaseq>MDRPRQQHEPEHLGGGGIDVEVELDPEDLQPSVPLKKVPAGDLF EAARAGDCARLALLLGGGANVNERDRWDSVALYYACLAGHADAARMLLEAGAVCAERT FDGDRCHYAALNLRLRRLLKAFEARPPPLPPLPAALRATFLACPANRAAFLEMLQWTA GSEAAALAAAAGFGPTDNPSSTSLFPPDITFYVDGKPIEAHRVILCARSSFFRRKFNT DWKDRKEVRFSSQKLSFGALYSLVHFFYSDRLEVDVDDMENLARACKVCKCEGLQKIL IKEATLQRYAEHKSPRDLDSSQKRFILHGQSLPEEDRLPSALRHIFEECLANSREQEC YNDESNEMSRDSGVDAAADLYIKVCDKVFHCHQVILASRSEYFKARLSRNMDFLEVKS GLQSTQSLPFLEEHDMSTEAFEKVLEYMYTDNLEHMDPNQAEELFDIASRYLLFPLKR VVADILLPYLEHVSPAELCHWLMLSDIYDVVKIREYCLDIIACNFEMFADTREFRALL LTLPPPSGDDSLRTTRPSEPGTAGNTDQGNLLDDLREKWLEAEAAELDERDESAKLFD NRLEMLMLVAEQEANDGNV</aaseq>

Gene Sequence

<dnaseqindica>81..594#936..1680#1763..1799#1896..2029#2111..2438#attttccgcgaacccattcccattcccattcccactctccctccctccgccgccaaattcgccggagaaacaaaaaaaaaatggaccgcccgcggcagcagcacgagccggagcatctcggcggcggcggcatcgacgtcgaggtcgagctcgacccggaggacctccagccgtcggtgcccctcaagaaggtccccgcgggggacctcttcgaggcggcccgcgcgggggactgcgcccgcctcgccctcctcctcggcggcggcgccaacgtcaacgagcgcgaccgctgggactccgtcgcgctctactacgcctgcctcgccggccacgccgacgccgcccggatgctgctcgaggccggggccgtctgcgccgagcgcaccttcgacggcgaccgctgccactacgccgcgctcaacctccgcctccggaggctgctcaaggcgttcgaggccaggcccccgccgctgccgccgctccccgccgcgctcagggccacgttcctcgcctgccccgccaaccgcgccgccttcctcgagatgctccagtggaccgccggctccgaagccgccgccctcgccgctgctgctggtgagtgcgtctccttggatcgcttatgctgattggatgtttgggtgcaatttttatctatcggtgacatgggattgaaagttgaagctccttgtggaatgatttatcatgaatgccagcattggatgattgagtggtgaaaatacatggagtttggtagctatactgtgatttcaatcgaacctatgaattcacatatcgtactaatatcgatttaacatttgaaatgcacaatcgcaattggttcgtccatctatgtgatacatcaagatactatgatatacaagccaaaggttatttggttgataagtgttgtattcccatattttctgactaagcaggatttgggccaacggacaatccatcaagtactagcctattccctccggacattacattctacgtggatggaaaaccaattgaagctcatcgggtcattctttgtgcccggtcatccttctttcggaggaaattcaatacagactggaaagacaggaaggaagtgagattttctagccagaagttatcttttggtgccttgtacagccttgtccatttcttctattctgatagactcgaagtggatgtggatgatatggaaaatttggcgcgggcgtgcaaagtttgtaagtgtgagggtttgcaaaagatattgattaaagaagctactctccagagatatgcagaacacaagtcaccgagagatttggacagttcacagaagaggttcattttacatgggcaatccttgccagaggaggatcgccttccatcagccctgcggcatatttttgaggaatgtctagctaactcaagagaacaagaatgttataacgatgaatcaaatgaaatgagcagagactctggtgtagatgctgctgctgatctttatataaaagtatgtgataaggttttccattgccatcaggtgattttagcctcaagatcagagtactttaaagctaggctatctagaaacatggattttcttgaagtcaagagtgggcttcaatcaactcagagccttccttttcttgaagagcatgacatgagtacagaagcatttgaaaaggtgcttgaatacatgtaagatccctttctctacttctttgaccatcatgttactattattatgctcttatttgttgcttgcttatgtcaactttaggtatactgataacctagagcatatggatcctaatcaggtgagatgtgcaaaagagaaatatattatgtcttgtaaaaaggttcaagtgggtttgttttgttatgaaactgattttcatgtacaactttgccaggctgaagaactatttgatattgcttcgagatacctgctattcccccttaaacgagttgtggcagatatacttttgccttatctggagcatgtttcacctgcagaactatgccactggctaatgttatcagacatgtatgtgtgattaccatttcatctatgcaaagattatttactgtatcatataaggtcaatacatttgttttccaaatgcagttatgatgttgtgaaaataagggagtattgcttggatatcatcgcttgcaattttgagatgtttgcggacacaagagagttcagggcattgcttttgacacttccaccaccatctggagatgactcactgcgaacaactcgtcccagtgaacctggtactgcaggcaacactgaccaaggcaaccttcttgatgatttgcgtgagaaatggttagaagcagaggctgctgagctagacgagagagatgagagtgcaaagctgtttgacaaccgattggaaatgcttatgcttgtagcagaacaagaagccaatgatggcaatgtttgactccactgag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0318200, RefSeq:Os06g0318200