Difference between revisions of "Os06g0320700"

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(Created page with "{{JaponicaGene| GeneName = Os06g0320700| Description = Protein of unknown function UPF0061 family protein| Version = NM_001064049.1 GI:115467829 GeneID:4340893| Length = 5...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0320700|
 
GeneName = Os06g0320700|

Revision as of 20:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0320700

Description

Protein of unknown function UPF0061 family protein

Version

NM_001064049.1 GI:115467829 GeneID:4340893

Length

5803 bp

Definition

Oryza sativa Japonica Group Os06g0320700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12524787..12530589

Sequence Coding Region

12525139..12525393,12525917..12526190,12526276..12526582,12526671..12526918,12528385..12528684
,12528768..12528824,12530035..12530144,12530257..12530586

Expression

GEO Profiles:Os06g0320700

Genome Context

<gbrowseImage1> name=NC_008399:12524787..12530589 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12524787..12530589 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccccacacctctcctcctccctcttctcctcctcccctctccccaccgccctcctctcctccctcacccgccgcgcccgcgccctcctccccctccccctccccctccccgccgcctccacccgccgccgcctccctctccgccgcggcccgctgctgacgcgtggcatcatggcctccgccgccgcagaggcaccggccccgtcgccctcgcccaccgccgccgcgaacagccgaccgcggcgggtgctggaggagctctcctgggacgactccttcgtccgcgagctccccggcgacccccgatccgacgccatcccccgcgaggtgcttcacgcttgttacacaaaggtgtcaccctcagcgcccgtggacaaccctaagctggtggcgtggtcccagtccgtggctgacatcctcgatctggatcacaaagagtttgaaagacctgattttcctcagctgttctcaggagcaaatcctttggttgggagttcaccttatgcccagtgctatggtggacaccagtttggttcatgggctggtcagttgggcgacggacgagcaataactcttggagaggttatcaactctcgaggtgagagatgggagttgcagctcaagggctgtggaaagactccatacagccgatttgcagatggccttgctgtcctccgcagcagcattcgtgaattcctatgcagtgaagctatgcatggcctaggcatccctacaactcgtgctctttgtctagttgaaactggcaaatctgttgttcgagatatgttctatgatggcaattcaaaggaggaaccaggtgccattgtatgccgtgtagcaccatcctttttgcgttttggttcatatcagatacatgctacaagggacaaagaggaccttgaaattgttcgtcatttggcagactacacaatacgtcatcactacccacatctcgaaaatattaaaaagagtgaaggtttatcttttgaagcagctataggggactctccagcgatagatcttacttcgaacaaatatgcagcctgggcagttgaggttgcagagcgcactgctttcttgatagcaaggtggcaaggtgttggttttacccatggtgtgctcaacacggataatatgagtgtattaggactaactattgactatggaccctttggctttttggatgcttttgatcctagctatactccaaatacaacagacctccctgggaagagatactgttttgcaaatcaacctgatgttggcttgtggaatattgctcagtttacctcaccattgacagctgccgaacttatcagcaaagatgaggcaaattatgtgatggagaggtacgggacaaagtttatggatgagtatcaatccataatgaccaggaaacttggtctacccaagtataataagcagctaataggcaagctgcttaacaacctggctgttgataaggtcgattatacaaattttttccgtcttctttcaaatgtcaaagcagaccataacattccagagaaggagctacttgttccacttaaagctgcactcctagatattggaccagaaagaaaggaagcatggattagttgggtacaaacttacattgaagagttggtttcaagtggcgttcctgacgaagaaaggaaagctgccatgaactctgttaatccaaagtatgttcttcggaactatctctgccagactgcaattgacgcagctgagcaaggtgattatgatgaagttcgtcggttattgaaagttatggaacatccatatgatgagcagccaggaatggagaaatatgcccggttgccaccagcctgggcatacaggccaggagtgtgcatgctgtcctgctcatcatga</cdnaseq>

Protein Sequence

<aaseq>MPPHLSSSLFSSSPLPTALLSSLTRRARALLPLPLPLPAASTRR RLPLRRGPLLTRGIMASAAAEAPAPSPSPTAAANSRPRRVLEELSWDDSFVRELPGDP RSDAIPREVLHACYTKVSPSAPVDNPKLVAWSQSVADILDLDHKEFERPDFPQLFSGA NPLVGSSPYAQCYGGHQFGSWAGQLGDGRAITLGEVINSRGERWELQLKGCGKTPYSR FADGLAVLRSSIREFLCSEAMHGLGIPTTRALCLVETGKSVVRDMFYDGNSKEEPGAI VCRVAPSFLRFGSYQIHATRDKEDLEIVRHLADYTIRHHYPHLENIKKSEGLSFEAAI GDSPAIDLTSNKYAAWAVEVAERTAFLIARWQGVGFTHGVLNTDNMSVLGLTIDYGPF GFLDAFDPSYTPNTTDLPGKRYCFANQPDVGLWNIAQFTSPLTAAELISKDEANYVME RYGTKFMDEYQSIMTRKLGLPKYNKQLIGKLLNNLAVDKVDYTNFFRLLSNVKADHNI PEKELLVPLKAALLDIGPERKEAWISWVQTYIEELVSSGVPDEERKAAMNSVNPKYVL RNYLCQTAIDAAEQGDYDEVRRLLKVMEHPYDEQPGMEKYARLPPAWAYRPGVCMLSC SS</aaseq>

Gene Sequence

<dnaseqindica>5197..5451#4400..4673#4008..4314#3672..3919#1906..2205#1766..1822#446..555#4..333#gccatgcccccacacctctcctcctccctcttctcctcctcccctctccccaccgccctcctctcctccctcacccgccgcgcccgcgccctcctccccctccccctccccctccccgccgcctccacccgccgccgcctccctctccgccgcggcccgctgctgacgcgtggcatcatggcctccgccgccgcagaggcaccggccccgtcgccctcgcccaccgccgccgcgaacagccgaccgcggcgggtgctggaggagctctcctgggacgactccttcgtccgcgagctccccggcgacccccgatccgacgccatcccccgcgaggtgcgtgcgtcgctggggtttactccccgcttcgtggctcgtctcgtctagtgcccttcgctttgcttgcttctgcttcacccggtgattttgtgctgcttgggtgacgcaggtgcttcacgcttgttacacaaaggtgtcaccctcagcgcccgtggacaaccctaagctggtggcgtggtcccagtccgtggctgacatcctcgatctggatcacaaagagtgagcccccagaattattctagtagctgttatgcatttatgcttgccgtccctagattattttggttttggggggtatccctgatgtctgtggataaatcagatgagggttggacaggctgcctttgaattagcatagctcgcttttttcagatgcagtaagagatactgttttattcgaaataattagctttccgtgattggcaatgcgttggagcatatacctcgatcgaaaatagtccgttatggatagagatgtaaatgagaagtggaaatttgagtgtgtataacctgcaaaaatattacaaaacctatcatatcacccttggtagcacatgagctcgaactggtccatacagcacctctaacttatgcattcactgttcgaagatttagtgtcattaccttttgcccaccagggactcttatcgctaacattttaatttatgcccacaacactgacaagtaaggtgaaaattttattcatttatgtttttgctgatgtgctgcagtgtgggtgaaagtggtgttgcctagagttaatgttaccgaaactttccaataaaaaatacaccttgtctttaagtttttgaagaaagttagcacagagaaaaggattactaatcagatgttcaaaattcgaacaccagagcgaagtattacatggtacacagacatggcatcatgacactcgtgtcagaatcctaattggagtggtgtgtccgatgcggcataaaaagtgggcacacataatacaactcagaatcggactggagtggtgttggaatacgacttggacctgggtgcctgattcggcaagaaattatttgcccatgcaatattctttttctgtgttgcccaactcaaacttcttgttttttaatttgccacatgataggccaagtgtgctgtctggcatgttatcagcttcttcttttggctactgaccactgaaactgtttatgacaagttggttttgctttttatacagatttttgtactggttgatttgttacaagaatactgtatttcttaagttgcttttgatcttgatatgatctgttaatgaattaagctgagtaatgcatttttacctcctaccaactctcattttctccatttttgtgtagaagcatgttcattgttctcttccctgttactgtcatccattccttttaatcattttgtatccttgttggtctactttcaggtttgaaagacctgattttcctcagctgttctcaggagcaaatcctttggttgggaggtgcgtaatactaatgcttaacattctcttcatatgattgcacaagaaaagcaacacaccttctgatgaacaactacctgcagttcaccttatgcccagtgctatggtggacaccagtttggttcatgggctggtcagttgggcgacggacgagcaataactcttggagaggttatcaactctcgaggtgagagatgggagttgcagctcaagggctgtggaaagactccatacagccgatttgcagatggccttgctgtcctccgcagcagcattcgtgaattcctatgcagtgaagctatgcatggcctaggcatccctacaactcgtgctctttgtctagttgaaactggcaaatctgttgttcgagatatgttctatgagtatgtcatgacatctctgttttctgaactacatcatgctcgatctatttttctttctaaatttactttagaaacagatcgttccatatccgaagttgtatatctcattgttatgagatatttcttccttctatctaacatggtcacaaagattaaaaagagaacaatagatgatatgagtctctctatagaaagaatgatagatgatcaataatattattatttaaagctaaatatgaagctgccaataggcaaaaataataatggtagcgtgtttctgaaaacgtggtactattttaaacttttaactgtatgtttatggagaacatatcctatccgcacaagcttcccgtgcacattaacagccaaatatcacggaaaattctagaaaaaatatgacatgtactcttaatagtattacacatatctacaaagtcttatattcaaattcgctatattttagctgtaacaaaaaaaagtgaaaattttgacagttttaagattaaaaatctgtcataatttcgtcttttcgttacgattaaaatataatgatttgaacatgaaatgtcacagataggtgtaatactatttaaagtatgtgttcaattttttctagaaattttttgtgacatttgctagttggtgtgcacgggaagcttgtatgcataggatatgttcccatgtgtatgttgcttgagccacatatatataccagcataagctgcagtgggcctgctactgaacaagtctgttagcttctttggtgatggttgtgctggggatgtagaaattaccctgaatggcacgaatcatgtggtgatggctcattttcgtttttagcacatgtgagtttgagttttttttttccatttctttagtgcatgactgtatgtggaaatcatatttggcatattccagtatcattagtctacataagtaaattgtctggttttcatgatatatataatagcacttgtgagcactaaatgttgaaatgattaccccttgccactatgtcaactatgattcttggctgcaatattacgcaaccgagttactgcagctgctaactgcttttgtccacaagtgtgtgtagttacataacaaagcagcagcgaccactgtaatgcagcatgtagcagctgctctaagattcttcaggtttccttgggccatataacacgtccttcttttaagaaagtgcataattttgcccccccccccccaattttttttatttttattaactttgtattgaatactatcatacaaactccattgtccctttcatttacctactgttgattaacattaccttagcggctttttcataaagaacactggttgccaggacctttccccttttttttttccagaaccttccttttgaaggttttagtaattatgttgtatctattagcatttgtttatgatgataaatctaatggtttgtctttatatatcagtggcaattcaaaggaggaaccaggtgccattgtatgccgtgtagcaccatcctttttgcgttttggttcatatcagatacatgctacaagggacaaagaggaccttgaaattgttcgtcatttggcagactacacaatacgtcatcactacccacatctcgaaaatattaaaaagagtgaaggtttatcttttgaagcagctataggggactctccagcgatagatcttacttcgaacaaatatgcaggtaaatatcattatgtgctattttctttcagtctactcattgatatttaaaaggctaagtattctccccttttaatccttggttacagcctgggcagttgaggttgcagagcgcactgctttcttgatagcaaggtggcaaggtgttggttttacccatggtgtgctcaacacggataatatgagtgtattaggactaactattgactatggaccctttggctttttggatgcttttgatcctagctatactccaaatacaacagacctccctgggaagagatactgttttgcaaatcaacctgatgttggcttgtggaatattgctcagtttacctcaccattgacagctgccgaacttatcagcaaagatgaggcaaattatgtgatggagaggtgcattgttttgtccaatatttactgattattacccatgattatgtccagatgtatcatacattttgatttctgtgtactgcaggtacgggacaaagtttatggatgagtatcaatccataatgaccaggaaacttggtctacccaagtataataagcagctaataggcaagctgcttaacaacctggctgttgataaggtcgattatacaaattttttccgtcttctttcaaatgtcaaagcagaccataacattccagagaaggagctacttgttccacttaaagctgcactcctagatattggaccagaaagaaaggaagcatggattagttgggtacaaacttacattgaagaggtaggctttacttttggtaatcgtttattcagtttgtttctctaattctattttataagtgcactttcaaacccaacataatggtatagcacatcaatatattatcaatgatttttgtcttgcttgttggtgtttgggtatgtgtttgtcaacccctgtcattttgtgaagttggaatagtcatgtgtacaaaagaatgtcacaaggcagaaatgagtggttgtttgctcccgttatatgcttccaaatatttacaatcatttacatattggattatattgttttgaaaattgcatcaactgttggttttggataatatctcattcattgttaatgtatcatcagcatgctaatcaattccctgaattattgacttattctgccaatagccaatatgttggtagatcctctttgcttcattagttcaaacatttatagcgaactacagctttgagaaacgacaagttgtaaagaggctatttggacatccttgatctaatgatatatttttttctttgtgaagttggtttcaagtggcgttcctgacgaagaaaggaaagctgccatgaactctgttaatccaaagtatgttcttcggaactatctctgccagactgcaattgacgcagctgagcaaggtgattatgatgaagttcgtcggttattgaaagttatggaacatccatatgatgagcagccaggaatggagaaatatgcccggttgccaccagcctgggcatacaggccaggagtgtgcatgctgtcctgctcatcatgaaaccaacattccatcacgtcaaatatgcaaacttgttttttttatattatttttttctgtataggaggtttaattttgagctactgctatagtgtctaaagcatcacatgctattttactgccgatgcatatcagaaactggtgttgttaatcttcgagttatcatattgttgacggtagctaagcgttcatagcagttgggaaatagagccaccaaactcatccgattttcttagatatagtgctttgttgttgtgaacagattatattttcgcagatgaacatgatgtgcatttagttttagctgtccatctaattatgtccagcaacatgagaggtgtttatttacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0320700, RefSeq:Os06g0320700