Difference between revisions of "BGIOSGA034761"
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| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
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| + | ===Expression=== | ||
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| + | ===Evolution=== | ||
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| + | You can also add sub-section(s) at will. | ||
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| + | ==Labs working on this gene== | ||
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| + | ==References== | ||
| + | Please input cited references here. | ||
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| + | ==Structured Information== | ||
Please input one-sentence summary here. | Please input one-sentence summary here. | ||
Revision as of 18:11, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA034761 |
|---|---|
| Description |
Probable calcium-transporting ATPase 4, plasma |
| Definition |
Oryza sativa Indica Group BGIOSGA034761, complete gene. |
| LocusTag |
OS12G0136900 |
| Ensembl Transcript ID |
BGIOSGA034761-TA |
| Ensembl Protein ID |
BGIOSGA034761-PA |
| Length |
5659 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:1584042..1589700 |
| Sequence Coding Region |
1584042..1584227,1586039..1586093,1586181..1588123,1588198..1588356,1588548..1588719 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome11:1584042..1589700 source=RiceIndica11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome11:1584042..1589700 source=RiceIndica11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGAGAAGCTTGACAGGTACCTGCAGGAGCACTTCGATGTGCCGGCCAAGAACCCGTCGGAGGAGGCGCAGCGGCGATGGCGGCAAGCCGTTGGCACCATCGTCAAGAACCGCCGCCGCCGCTTCCGCTGGGTGCCCGACCTCGACCGCCGCTCCTTGGACAAGGCCAAGGTCCGCTCCACCCAGGAAAAGATTCGGGTTGCCCTCTATGTGCAGCAGGCTGCACTCATTTTTAGTGATGGTGCCAAAAAGAAAGAGTTCAAGCTAACAGAGGATATTATTAAAGCTAGATTTTCCATCAATCCAGATGAACTAGCATTGATCACAAGCAAGCATGATTCGAAAGCTTTAAAGATGCATGGTGGGGTAGATGGGATATCTAAAAAAGTCCGTTCATCGTTTGATCATGGCATATGTGCTAGTGACTTAGATACAAGACAGAACATATATGGCGTCAACCGTTATGCAGAAAAGCCTTCAAGAAGTTTCTGGATGTTTGTTTGGGATGCATTCCAGGACATGACCCTTATAATTCTTATGGTATGTGCATTGCTATCTGTTGCAGTTGGTTTGGCAACAGAAGGATGGCCAAAGGGCATGTATGATGGCTTGGGTATAATACTCAGCATTTTCTTAGTTGTTATGGTTACTGCTGTTAGTGATTATAAGCAGTCACTCCAATTTAAGGAGCTAGACAATGAAAAGAAAAAGATATTTATCCATGTAACCAGAGATGGGCGTCGACAAAAGATCTCTATATATGACTTGGTAGTTGGTGATATAGTTCATCTGTCAATTGGAGATCAAGTACCTGCTGATGGACTATATATACATGGGTACTCCCTTTTGATTGATGAGTCCAGCTTATCTGGTGAGAGTGACCCAATGTATGTTTCTCAAGGCAAACCATTCATCTTGGCAGGAACTAAAGTGCAAGATGGATCTGCTAAGATGATAGTAACTGCTGTCGGTATGCGCACTGAATGGGGAAAATTGATGAGCACATTGAGTGAGGGAGGAGAGGATGAGACACCACTGCAGGTTAAGCTAAATGGAGTTGCGACCGTTATAGGAAAGATTGGACTGGTATTTGCCATATTAACATTTTTAGTTCTGCTGGTTAGATTCCTCATTGACAAAGGCATGACGGTTGGTCTGCTCAAATGGTATTCTACCGATGCATTGACTATAGTAAACTACTTTGCAACAGCGGTAACCATTATAGTTGTTGCTGTACCTGAAGGATTACCCTTGGCTGTTACTTTGAGTCTTGCATTTGCAATGAAAAAGTTAATGAATGATAAAGCACTTGTTAGACATCTTTCAGCGTGCGAAACAATGGGATCTGCTGGTACCATCTGCACGGACAAAACAGGAACTTTGACTACTAACCATATGGTTGTTGACAAAATATGGATATCTGAGGTTTCAAAGTCAGTTACCAGTAACACCATTTCAGGAGAACTTAATTCTGTGGTTTCTTCTAGAACATTGAGTCTGCTTTTGCAGGGAATTTTTGAGAATACTAGCGCTGAGGTGGTCAAGGAAAAGGATGGCAAGCAAACTGTCTTAGGAACTCCAACAGAAAGAGCAATATTAGAATTTGGCTTGGGCTTGGAAGGAGTTCATGATGCTGAGTATAGTGCCTGCACCAAGGTTAAGGTTGAGCCTTTCAATTCAGTCAAGAAGAAGATGGCAGTGCTGATTTCATTACCCAGTGGCACGTCCAGATGGTTTTGCAAAGGTGCATCAGAAATTATTTTGCAGATGTGCGACATGATGGTTGATGGCGATGGAAATGCTATTCCCTTATCGGAAGCTCAGAGAAAGAACATCTTAGATACTATCAACTCATTTGCTTCAGATGCTTTAAGGACGTTGTGCCTGGCATATAAGGAAGTGGATGATGATATTGATGACAATGCAGATAGTCCAACAAGTGGTTTTACTCTAATAGCCATTTTCGGTATCAAGGATCCTGTGCGCCCTGGAGTTAAGGATGCTGTTAAGACCTGTATGTCTGCTGGTATCACAGTAAGAATGGTAACTGGTGATAATATAAATACAGCTAAAGCTATAGCTAAAGAGTGTGGAATATTGACTGAAGATGGTGTAGCAATAGAAGGACCAGAATTCCATAGCAAGAGCCCAGAAGAGATGAGGGACCTGATACCGAATATTCAGGTTATGGCCCGTTCTTTACCATTGGATAAGCATACACTCGTGACAAACTTGCGAGGTATGTTTGATGAGGTGGTTTCTGTGACAGGTGATGGTACAAATGATGCTCCTGCATTACACGAAGCAGATATCGGGCTTGCTATGGGCATTGCAGGAACAGAGGTTGCCAAGGAGAGTGCAGATGTCATAGTACTTGACGACAATTTCACTACTATAATAAATGTTGCAAGATGGGTTCGTGCAGTTTATATTAACATCCAAAAGTTTGTGCAGTTTCAATTGACTGTCAATATTGTTGCTTTAGTTATCAATTTTGTCTCAGCATGCATCACAGGGAGCGCTCCTCTCACTGCTGTGCAGCTGTTGTGGGTCAATATGATCATGGATACACTGGGAGCTTTAGCACTAGCAACAGAGCCTCCAAATGATGAAATGATGAAGAGGCCACCTGTCCGAAAAGGGGAAAGTTTCATTACCAAGGTCATGTGGAGAAATATCATGGGCCAAAGTTTGTATCAGCTATTTGTACTTGGAGCTCTCATGTTTGGTGGAGAAAGCCTTCTGAACATCAAGGGTGCAGATTCCAAATCCATCATAAATACACTGATCTTCAACTCCTTCGTGTTTTGTCAGGTATTCAATGAAATAAACAGCAGAGAAATGCAGAAGATCAATGTTTTCCGTGGTATCATCAGCAATTGGATCTTCATTGCAGTCATAGCTGCAACCGTAGCATTTCAAGTGGTGATCATAGAGTTTCTTGGCACTTTCGCCAGTACTGTTCCGCTCAACTGGCAACATTGGCTGCTCAGCGTCGGCCTTGGCTCCATCAGCCTGATTGTTGGTGTCATCTTGAAGTGTATACCAGTTGGTTCAGGTGAAACCTCTGCAACTCCAAATGGATACAGCCCACTTGCCAATGACCCTGATGACATATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MEKLDRYLQEHFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQEKIRVALYVQQAALIFSDGAKKKEFKLTEDIIKARFSINPDELALITSKHDSKALKMHGGVDGISKKVRSSFDHGICASDLDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPMYVSQGKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLEGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEEMRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWVRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPVGSGETSATPNGYSPLANDPDDI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..186#1998..2052#2140..4082#4157..4315#4507..4678#4780..5078#5354..5659#ATGGAGAAGCTTGACAGGTACCTGCAGGAGCACTTCGATGTGCCGGCCAAGAACCCGTCGGAGGAGGCGCAGCGGCGATGGCGGCAAGCCGTTGGCACCATCGTCAAGAACCGCCGCCGCCGCTTCCGCTGGGTGCCCGACCTCGACCGCCGCTCCTTGGACAAGGCCAAGGTCCGCTCCACCCAGGTACTAACCAACCACGAACTACCCCGCCCTAATTCATCCATTCTCCTTTCCGCCATCACTTCGTTCTTCACTGCATCTCATCGTGAGTCGATTTGCCTAGCAAGAACAACACTTTGATTAAAAAAAAAACAAACTGCTTTTGGTTTGGGCATGTTCAGTATTCAGTAACCGTTGTTGGTCTTGTCTTGCCGGTTGCCATCAGATTGTATGACAATAATACACTTTGTTTGAATCGCTGCCACCCAAACAATCAAAGCCACAAAAGCAGGATATTTATGCTATTTCTTCGCGGTACTGGGCACGGACGCACAATACGGCCGTATCATGTTGACTTGTATACTCAGCTTTATTAGGGAGGAAAAGACCAAATTATCAGGGCCAACCTGACCGCGACCGTCAAGGAAGCTTCCGCGAAGCTTACAAGAGTCCAAAGAAAATGGTGTTAAAAGGACAAATATATCACCTTATTATCACATCGATTCTGTTATAAAGTTCTCTCCACCTGTCAATCTCATTGCAAATCTAAAATCATTGTTTATATTCTACTAGTCTTTCATATCGATTCCAAGTGTTCAACTATTTTGTCCCCATGTGAAAAAAAAGGAATCTTGTTTGTTTGGTGGGGAATCCAACATTGCGTCTTGAGACTCTTAATTCAGGGATTTGTTCTACATTACTATGCGCTATATATATTTTTAGTTATATACTTATATGCCTGTATTCTAGGTTTGGTGGATAGGGTGGGCCGATCCGCAGATGTCTATTTCTGATTTCTGAGACCCTTTCTTATATTATTTTCTTGTATTATTTCCATCACATAAAAATTCCCCTATTTTACCGTTCAGTCAACTGAGAACTCTAACTTCAGTTCATTAGGGGCCTTCTTGTTTTACGATAATGCTAGTCAAAGATGCATACTTTGTAAGCAGAACCAGAGTTGTTCATGACAAAAACTTACTTTACTCTTTATATATTTTCCAAAACCAGTCCTTAACTCCTATTGGTATTCGATTAAGAAGGTACATTCAATACTTTGTTGGCATGTTCAAGTTTGCAAATCAATAAGCAGTTCTTAAAGCAGATAATCTTCTTACTGGTTGGTGGCCGAAAGACACTTTTCAAAACCAGAATTAACTGACAACTAGTTTGATTTGTAATTATTGTTTGAATTCTAGACGCTTCACATTTTGTTGTCTTAGATGCAATATTTTTTATGTGAATGTAATTACTCTATGCTTAAAATGTAACCGATTTATTTTTGACAATCATGCTGGAAAAATTTGCAAACACCAAATTCAATCATTTGGTTGATCTGCTTTCTTCTAGGCTGGAAAACTTTCTTGTTACACAATGCAAATAACAGCTAGTTCTTTCTTCCAATGATCCAATCCATTTCTAACATAAATCAAGAGTAGGGAAGGTATTTCTATTATAAGGAGATTAGGAGGATGACACTGGATGATGCAGGTATAGTGGCAATATAACTTCAAATGTAGGATGACTATCATGTTTGCAATAAAGCTCAACACCATGTTTCTTGTAAGAACAATCATGGGGCTAGAACTTGTACCACTATATTTGAACAAAGCTTTCCAAGCCTTCCATATGCGCAACTTAAATGAGTTATATTTTTGCATCCGAATGGTTGGATTAATTAACTTCATTGTCATGGGCTAAACAACAGTATTACTATTCCTTATCAGTTACCGCATTTTATAATATGTGATTTTATCTTACGACTACAAGAAAATGATTATAATATTATATATAAGCAGTAAAAATGGTTTCCCTTTTTGTGTTTGCTTTACCAGGAAAAGATTCGGGTTGCCCTCTATGTGCAGCAGGCTGCACTCATTTTTAGTGATGGTATGGAGTAGCTTTTCTATGTTACTGTTCTTTTTTAGTATGGAATAACTCTATGTAACTTGATTTACTCCCAATATTTAACAAAAGGTGCCAAAAAGAAAGAGTTCAAGCTAACAGAGGATATTATTAAAGCTAGATTTTCCATCAATCCAGATGAACTAGCATTGATCACAAGCAAGCATGATTCGAAAGCTTTAAAGATGCATGGTGGGGTAGATGGGATATCTAAAAAAGTCCGTTCATCGTTTGATCATGGCATATGTGCTAGTGACTTAGATACAAGACAGAACATATATGGCGTCAACCGTTATGCAGAAAAGCCTTCAAGAAGTTTCTGGATGTTTGTTTGGGATGCATTCCAGGACATGACCCTTATAATTCTTATGGTATGTGCATTGCTATCTGTTGCAGTTGGTTTGGCAACAGAAGGATGGCCAAAGGGCATGTATGATGGCTTGGGTATAATACTCAGCATTTTCTTAGTTGTTATGGTTACTGCTGTTAGTGATTATAAGCAGTCACTCCAATTTAAGGAGCTAGACAATGAAAAGAAAAAGATATTTATCCATGTAACCAGAGATGGGCGTCGACAAAAGATCTCTATATATGACTTGGTAGTTGGTGATATAGTTCATCTGTCAATTGGAGATCAAGTACCTGCTGATGGACTATATATACATGGGTACTCCCTTTTGATTGATGAGTCCAGCTTATCTGGTGAGAGTGACCCAATGTATGTTTCTCAAGGCAAACCATTCATCTTGGCAGGAACTAAAGTGCAAGATGGATCTGCTAAGATGATAGTAACTGCTGTCGGTATGCGCACTGAATGGGGAAAATTGATGAGCACATTGAGTGAGGGAGGAGAGGATGAGACACCACTGCAGGTTAAGCTAAATGGAGTTGCGACCGTTATAGGAAAGATTGGACTGGTATTTGCCATATTAACATTTTTAGTTCTGCTGGTTAGATTCCTCATTGACAAAGGCATGACGGTTGGTCTGCTCAAATGGTATTCTACCGATGCATTGACTATAGTAAACTACTTTGCAACAGCGGTAACCATTATAGTTGTTGCTGTACCTGAAGGATTACCCTTGGCTGTTACTTTGAGTCTTGCATTTGCAATGAAAAAGTTAATGAATGATAAAGCACTTGTTAGACATCTTTCAGCGTGCGAAACAATGGGATCTGCTGGTACCATCTGCACGGACAAAACAGGAACTTTGACTACTAACCATATGGTTGTTGACAAAATATGGATATCTGAGGTTTCAAAGTCAGTTACCAGTAACACCATTTCAGGAGAACTTAATTCTGTGGTTTCTTCTAGAACATTGAGTCTGCTTTTGCAGGGAATTTTTGAGAATACTAGCGCTGAGGTGGTCAAGGAAAAGGATGGCAAGCAAACTGTCTTAGGAACTCCAACAGAAAGAGCAATATTAGAATTTGGCTTGGGCTTGGAAGGAGTTCATGATGCTGAGTATAGTGCCTGCACCAAGGTTAAGGTTGAGCCTTTCAATTCAGTCAAGAAGAAGATGGCAGTGCTGATTTCATTACCCAGTGGCACGTCCAGATGGTTTTGCAAAGGTGCATCAGAAATTATTTTGCAGATGTGCGACATGATGGTTGATGGCGATGGAAATGCTATTCCCTTATCGGAAGCTCAGAGAAAGAACATCTTAGATACTATCAACTCATTTGCTTCAGATGCTTTAAGGACGTTGTGCCTGGCATATAAGGAAGTGGATGATGATATTGATGACAATGCAGATAGTCCAACAAGTGGTTTTACTCTAATAGCCATTTTCGGTATCAAGGATCCTGTGCGCCCTGGAGTTAAGGATGCTGTTAAGACCTGTATGTCTGCTGGTATCACAGTAAGAATGGTAACTGGTGATAATATAAATACAGCTAAAGCTATAGCTAAAGAGTGTGGAATATTGACTGAAGATGGTGTAGCAATAGAAGGACCAGAATTCCATAGCAAGAGCCCAGAAGAGATGAGGGACCTGATACCGAATATTCAGGTTCATAATGTTTTCCTCAGTCTATATGTTTACTCAAATATTGACCAAACTTAATATCTGGAAATATTTTGCAGGTTATGGCCCGTTCTTTACCATTGGATAAGCATACACTCGTGACAAACTTGCGAGGTATGTTTGATGAGGTGGTTTCTGTGACAGGTGATGGTACAAATGATGCTCCTGCATTACACGAAGCAGATATCGGGCTTGCTATGGGCATTGCAGGAACAGAGGTACTGTTTCCTATGCAGTTCAAAACTTATGGACGTAGCATCAATAGACATTAAAAAAGTCAGATATTTAGGACGAATATGTCAGTATTCATTCTTACTGAAATAAGTTGACCCTGATAACCCATTTTGGATACTTTGTATTTTCTTTTTCATCTTCTGAAATGGAGTAATTTTGTCTTTTATTTGTGCAGGTTGCCAAGGAGAGTGCAGATGTCATAGTACTTGACGACAATTTCACTACTATAATAAATGTTGCAAGATGGGTTCGTGCAGTTTATATTAACATCCAAAAGTTTGTGCAGTTTCAATTGACTGTCAATATTGTTGCTTTAGTTATCAATTTTGTCTCAGCATGCATCACAGGTGAGGGCAACATTATAGTATTCATCTGATACTATGTATTTCCATTAAGTGGTTCCCCATGATCTCCAACACAGTACTAATGTTTCTCTCTTCCGTCACAGGGAGCGCTCCTCTCACTGCTGTGCAGCTGTTGTGGGTCAATATGATCATGGATACACTGGGAGCTTTAGCACTAGCAACAGAGCCTCCAAATGATGAAATGATGAAGAGGCCACCTGTCCGAAAAGGGGAAAGTTTCATTACCAAGGTCATGTGGAGAAATATCATGGGCCAAAGTTTGTATCAGCTATTTGTACTTGGAGCTCTCATGTTTGGTGGAGAAAGCCTTCTGAACATCAAGGGTGCAGATTCCAAATCCATCATAAATACACTGATCTTCAACTCCTTCGTGTTTTGTCAGGTTAGTGCATTATGGAACACTGTAACCATGCTAGTATTTCCACAAACCACTCACATAAAATGGTGTTTCTTTTTTGGCCTTAAGACCTATGGTGAAACTGAGGTCTTTCCGAAGTCCGCCACAATATGTGTTTGGTTGGTCACAGCTTATATTTCCAATATCATGCTTAAGAATCCTGAACTGATAGATATATCTTTTTTTTAAAAAAAAATAATCATGATTTGGCAAGGGAATTTCTTGTTCTAATGATGATGTTCTGGCAAACGTTGTACCAGGTATTCAATGAAATAAACAGCAGAGAAATGCAGAAGATCAATGTTTTCCGTGGTATCATCAGCAATTGGATCTTCATTGCAGTCATAGCTGCAACCGTAGCATTTCAAGTGGTGATCATAGAGTTTCTTGGCACTTTCGCCAGTACTGTTCCGCTCAACTGGCAACATTGGCTGCTCAGCGTCGGCCTTGGCTCCATCAGCCTGATTGTTGGTGTCATCTTGAAGTGTATACCAGTTGGTTCAGGTGAAACCTCTGCAACTCCAAATGGATACAGCCCACTTGCCAATGACCCTGATGACATATAG</dnaseqindica> 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| External Link(s) |
